RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 MRPL13Q9BYD1 178 aaKnown RBP3.69□□□□□ -1.82
NUP88-213ENST00000576862 NAT10Q9H0A0 1025 aaKnown RBP3.69□□□□□ -1.82
NUP88-213ENST00000576862 NDUFA13Q9P0J0 144 aa3.69□□□□□ -1.82
NUP88-213ENST00000576862 LHX3Q9UBR4 397 aa3.69□□□□□ -1.82
NUP88-213ENST00000576862 PURGQ9UJV8 347 aaKnown RBP3.69□□□□□ -1.82
NUP88-213ENST00000576862 CHMP2BQ9UQN3 213 aa3.69□□□□□ -1.82
NUP88-213ENST00000576862 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.69□□□□□ -1.82
NUP88-213ENST00000576862 SLCO1B1Q9Y6L6 691 aa3.69□□□□□ -1.82
NUP88-213ENST00000576862 FRMPD4Q14CM0 1322 aa3.69□□□□□ -1.82
NUP88-213ENST00000576862 BAZ2AQ9UIF9 1905 aaKnown RBP3.68□□□□□ -1.82
NUP88-213ENST00000576862 SIPA1L1O43166 1804 aa3.68□□□□□ -1.82
NUP88-213ENST00000576862 TUBAL3A6NHL2 446 aa3.68□□□□□ -1.82
NUP88-213ENST00000576862 SLC17A2O00624 439 aa3.68□□□□□ -1.82
NUP88-213ENST00000576862 TNFSF11O14788 317 aa3.68□□□□□ -1.82
NUP88-213ENST00000576862 KLRC4O43908 158 aa3.68□□□□□ -1.82
NUP88-213ENST00000576862 LCMT2O60294 686 aaKnown RBP3.68□□□□□ -1.82
NUP88-213ENST00000576862 FCMRO60667 390 aa3.68□□□□□ -1.82
NUP88-213ENST00000576862 ZNF44P15621 663 aa3.68□□□□□ -1.82
NUP88-213ENST00000576862 HOXB8P17481 243 aaPredicted RBP3.68□□□□□ -1.82
NUP88-213ENST00000576862 RGRP47804 291 aa3.68□□□□□ -1.82
NUP88-213ENST00000576862 CSNK1G2P78368 415 aa3.68□□□□□ -1.82
NUP88-213ENST00000576862 MYL5Q02045 173 aa3.68□□□□□ -1.82
NUP88-213ENST00000576862 ASAH1Q13510 395 aa3.68□□□□□ -1.82
NUP88-213ENST00000576862 RFTN1Q14699 578 aaPredicted RBP3.68□□□□□ -1.82
NUP88-213ENST00000576862 TATDN3Q17R31 274 aa3.68□□□□□ -1.82
NUP88-213ENST00000576862 TTMPQ5BVD1 217 aa3.68□□□□□ -1.82
NUP88-213ENST00000576862 SLC25A25Q6KCM7 469 aa3.68□□□□□ -1.82
NUP88-213ENST00000576862 DPY19L2P2Q6ZN68 376 aa3.68□□□□□ -1.82
NUP88-213ENST00000576862 GATSQ8NAP1 163 aa3.68□□□□□ -1.82
NUP88-213ENST00000576862 MLKLQ8NB16 471 aa3.68□□□□□ -1.82
NUP88-213ENST00000576862 COLGALT1Q8NBJ5 622 aa3.68□□□□□ -1.82
NUP88-213ENST00000576862 OR5T1Q8NG75 326 aa3.68□□□□□ -1.82
NUP88-213ENST00000576862 OR4K14Q8NGD5 310 aa3.68□□□□□ -1.82
NUP88-213ENST00000576862 RFESDQ8TAC1 157 aa3.68□□□□□ -1.82
NUP88-213ENST00000576862 LRRC20Q8TCA0 184 aa3.68□□□□□ -1.82
NUP88-213ENST00000576862 TFB1MQ8WVM0 346 aaKnown RBP3.68□□□□□ -1.82
NUP88-213ENST00000576862 EMG1Q92979 244 aaKnown RBP3.68□□□□□ -1.82
NUP88-213ENST00000576862 SLC35B4Q969S0 331 aa3.68□□□□□ -1.82
NUP88-213ENST00000576862 OPTNQ96CV9 577 aa3.68□□□□□ -1.82
NUP88-213ENST00000576862 ZNF317Q96PQ6 595 aaPredicted RBP3.68□□□□□ -1.82
NUP88-213ENST00000576862 OR5M11Q96RB7 305 aa3.68□□□□□ -1.82
NUP88-213ENST00000576862 MAPKAP1Q9BPZ7 522 aa3.68□□□□□ -1.82
NUP88-213ENST00000576862 SMYD3Q9H7B4 428 aa3.68□□□□□ -1.82
NUP88-213ENST00000576862 TMEM185BQ9H7F4 350 aa3.68□□□□□ -1.82
NUP88-213ENST00000576862 ACTR8Q9H981 624 aa3.68□□□□□ -1.82
NUP88-213ENST00000576862 MEAF6Q9HAF1 191 aa3.68□□□□□ -1.82
NUP88-213ENST00000576862 ZFP14Q9HCL3 533 aa3.68□□□□□ -1.82
NUP88-213ENST00000576862 NT5MQ9NPB1 228 aa3.68□□□□□ -1.82
NUP88-213ENST00000576862 NKIRAS1Q9NYS0 192 aa3.68□□□□□ -1.82
NUP88-213ENST00000576862 STOX2Q9P2F5 926 aaPredicted RBP3.68□□□□□ -1.82
NUP88-213ENST00000576862 CHRNA9Q9UGM1 479 aa3.68□□□□□ -1.82
NUP88-213ENST00000576862 CA5BQ9Y2D0 317 aa3.68□□□□□ -1.82
NUP88-213ENST00000576862 DLEC1Q9Y238 1755 aa3.68□□□□□ -1.82
NUP88-213ENST00000576862 MYH13Q9UKX3 1938 aa3.68□□□□□ -1.82
NUP88-213ENST00000576862 KIF13BQ9NQT8 1826 aa3.67□□□□□ -1.82
NUP88-213ENST00000576862 IGLV3-22A0A075B6J6 115 aa3.67□□□□□ -1.82
NUP88-213ENST00000576862 A0A0J9YVX5 310 aa3.67□□□□□ -1.82
NUP88-213ENST00000576862 A0A1B0GUH1 482 aa3.67□□□□□ -1.82
NUP88-213ENST00000576862 A0A1W2PPV4 95 aa3.67□□□□□ -1.82
NUP88-213ENST00000576862 TMEM120BA0PK00 339 aa3.67□□□□□ -1.82
NUP88-213ENST00000576862 ARHGEF35A5YM69 484 aa3.67□□□□□ -1.82
NUP88-213ENST00000576862 PDZK1P1A8MUH7 402 aa3.67□□□□□ -1.82
NUP88-213ENST00000576862 FAM220BPB1ANY3 271 aa3.67□□□□□ -1.82
NUP88-213ENST00000576862 CDX4O14627 284 aaPredicted RBP3.67□□□□□ -1.82
NUP88-213ENST00000576862 MSH4O15457 936 aa3.67□□□□□ -1.82
NUP88-213ENST00000576862 SDC3O75056 442 aa3.67□□□□□ -1.82
NUP88-213ENST00000576862 PNMTP11086 282 aa3.67□□□□□ -1.82
NUP88-213ENST00000576862 DBTP11182 482 aaKnown RBP3.67□□□□□ -1.82
NUP88-213ENST00000576862 CCL2P13500 99 aa3.67□□□□□ -1.82
NUP88-213ENST00000576862 NT5EP21589 574 aa3.67□□□□□ -1.82
NUP88-213ENST00000576862 HOXA9P31269 272 aa3.67□□□□□ -1.82
NUP88-213ENST00000576862 YWHABP31946 246 aaKnown RBP3.67□□□□□ -1.82
NUP88-213ENST00000576862 ADRA1AP35348 466 aa3.67□□□□□ -1.82
NUP88-213ENST00000576862 NAA10P41227 235 aaPredicted RBP3.67□□□□□ -1.82
NUP88-213ENST00000576862 NAMPTP43490 491 aa3.67□□□□□ -1.82
NUP88-213ENST00000576862 XCR1P46094 333 aa3.67□□□□□ -1.82
NUP88-213ENST00000576862 KCNJ3P48549 501 aa3.67□□□□□ -1.82
NUP88-213ENST00000576862 CSNK1EP49674 416 aaKnown RBP3.67□□□□□ -1.82
NUP88-213ENST00000576862 ACADVLP49748 655 aa3.67□□□□□ -1.82
NUP88-213ENST00000576862 NUMBP49757 651 aa3.67□□□□□ -1.82
NUP88-213ENST00000576862 PPT1P50897 306 aa3.67□□□□□ -1.82
NUP88-213ENST00000576862 MNAT1P51948 309 aa3.67□□□□□ -1.82
NUP88-213ENST00000576862 BST1Q10588 318 aa3.67□□□□□ -1.82
NUP88-213ENST00000576862 VGLL4Q14135 290 aa3.67□□□□□ -1.82
NUP88-213ENST00000576862 GPR176Q14439 515 aa3.67□□□□□ -1.82
NUP88-213ENST00000576862 MOGQ16653 247 aa3.67□□□□□ -1.82
NUP88-213ENST00000576862 PDZK1Q5T2W1 519 aa3.67□□□□□ -1.82
NUP88-213ENST00000576862 RAET1LQ5VY80 246 aa3.67□□□□□ -1.82
NUP88-213ENST00000576862 SLC22A10Q63ZE4 541 aa3.67□□□□□ -1.82
NUP88-213ENST00000576862 THOC7Q6I9Y2 204 aaKnown RBP3.67□□□□□ -1.82
NUP88-213ENST00000576862 EIF3MQ7L2H7 374 aaKnown RBP3.67□□□□□ -1.82
NUP88-213ENST00000576862 NLRP9Q7RTR0 991 aa3.67□□□□□ -1.82
NUP88-213ENST00000576862 APTXQ7Z2E3 356 aaKnown RBP3.67□□□□□ -1.82
NUP88-213ENST00000576862 LUZP2Q86TE4 346 aa3.67□□□□□ -1.82
NUP88-213ENST00000576862 RANBP3LQ86VV4 465 aaPredicted RBP3.67□□□□□ -1.82
NUP88-213ENST00000576862 PRR22Q8IZ63 422 aa3.67□□□□□ -1.82
NUP88-213ENST00000576862 LIX1Q8N485 282 aa3.67□□□□□ -1.82
NUP88-213ENST00000576862 OR7G1Q8NGA0 311 aa3.67□□□□□ -1.82
NUP88-213ENST00000576862 FAM81AQ8TBF8 368 aa3.67□□□□□ -1.82
NUP88-213ENST00000576862 TRMT10AQ8TBZ6 339 aaKnown RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms