RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 NANPQ8TBE9 248 aa9.97□□□□□ -0.81
CTDNEP1-212ENST00000576613 SNX33Q8WV41 574 aa9.97□□□□□ -0.81
CTDNEP1-212ENST00000576613 TAAR8Q969N4 342 aa9.97□□□□□ -0.81
CTDNEP1-212ENST00000576613 TMEM19Q96HH6 336 aa9.97□□□□□ -0.81
CTDNEP1-212ENST00000576613 ZNF75AQ96N20 296 aa9.97□□□□□ -0.81
CTDNEP1-212ENST00000576613 SLC6A7Q99884 636 aa9.97□□□□□ -0.81
CTDNEP1-212ENST00000576613 ULBP2Q9BZM5 246 aa9.97□□□□□ -0.81
CTDNEP1-212ENST00000576613 ROPN1BQ9BZX4 212 aaPredicted RBP9.97□□□□□ -0.81
CTDNEP1-212ENST00000576613 ZNF696Q9H7X3 374 aa9.97□□□□□ -0.81
CTDNEP1-212ENST00000576613 MEAF6Q9HAF1 191 aa9.97□□□□□ -0.81
CTDNEP1-212ENST00000576613 ROPN1Q9HAT0 212 aaPredicted RBP9.97□□□□□ -0.81
CTDNEP1-212ENST00000576613 DDX28Q9NUL7 540 aaKnown RBP9.97□□□□□ -0.81
CTDNEP1-212ENST00000576613 MYEF2Q9P2K5 600 aaKnown RBP9.97□□□□□ -0.81
CTDNEP1-212ENST00000576613 CORINQ9Y5Q5 1042 aa9.97□□□□□ -0.81
CTDNEP1-212ENST00000576613 TGP01266 2768 aa9.97□□□□□ -0.81
CTDNEP1-212ENST00000576613 SLC22A23A1A5C7 686 aa9.96□□□□□ -0.82
CTDNEP1-212ENST00000576613 ZNF726A6NNF4 738 aa9.96□□□□□ -0.82
CTDNEP1-212ENST00000576613 TMPRSS2O15393 492 aa9.96□□□□□ -0.82
CTDNEP1-212ENST00000576613 ENTPD5O75356 428 aa9.96□□□□□ -0.82
CTDNEP1-212ENST00000576613 AVPP01185 164 aa9.96□□□□□ -0.82
CTDNEP1-212ENST00000576613 IL6P05231 212 aa9.96□□□□□ -0.82
CTDNEP1-212ENST00000576613 CBLP22681 906 aa9.96□□□□□ -0.82
CTDNEP1-212ENST00000576613 GATA3P23771 443 aa9.96□□□□□ -0.82
CTDNEP1-212ENST00000576613 FPR2P25090 351 aa9.96□□□□□ -0.82
CTDNEP1-212ENST00000576613 IL12AP29459 219 aa9.96□□□□□ -0.82
CTDNEP1-212ENST00000576613 SLC1A6P48664 564 aa9.96□□□□□ -0.82
CTDNEP1-212ENST00000576613 MVDP53602 400 aa9.96□□□□□ -0.82
CTDNEP1-212ENST00000576613 AQP5P55064 265 aa9.96□□□□□ -0.82
CTDNEP1-212ENST00000576613 KLF3P57682 345 aaPredicted RBP9.96□□□□□ -0.82
CTDNEP1-212ENST00000576613 HOXC5Q00444 222 aa9.96□□□□□ -0.82
CTDNEP1-212ENST00000576613 FOXL1Q12952 345 aa9.96□□□□□ -0.82
CTDNEP1-212ENST00000576613 CAMK2DQ13557 499 aa9.96□□□□□ -0.82
CTDNEP1-212ENST00000576613 ALG10BQ5I7T1 473 aa9.96□□□□□ -0.82
CTDNEP1-212ENST00000576613 RGS7BPQ6MZT1 257 aaPredicted RBP9.96□□□□□ -0.82
CTDNEP1-212ENST00000576613 TMEM154Q6P9G4 183 aa9.96□□□□□ -0.82
CTDNEP1-212ENST00000576613 SCAIQ8N9R8 606 aa9.96□□□□□ -0.82
CTDNEP1-212ENST00000576613 DNAJA4Q8WW22 397 aaPredicted RBP9.96□□□□□ -0.82
CTDNEP1-212ENST00000576613 FOXB1Q99853 325 aa9.96□□□□□ -0.82
CTDNEP1-212ENST00000576613 EMC6Q9BV81 110 aa9.96□□□□□ -0.82
CTDNEP1-212ENST00000576613 ZNF747Q9BV97 191 aa9.96□□□□□ -0.82
CTDNEP1-212ENST00000576613 ASPNQ9BXN1 380 aa9.96□□□□□ -0.82
CTDNEP1-212ENST00000576613 TMPRSS13Q9BYE2 586 aa9.96□□□□□ -0.82
CTDNEP1-212ENST00000576613 C20orf27Q9GZN8 174 aa9.96□□□□□ -0.82
CTDNEP1-212ENST00000576613 TPT1P8Q9HAU6 139 aa9.96□□□□□ -0.82
CTDNEP1-212ENST00000576613 NTN4Q9HB63 628 aa9.96□□□□□ -0.82
CTDNEP1-212ENST00000576613 KLHL14Q9P2G3 628 aa9.96□□□□□ -0.82
CTDNEP1-212ENST00000576613 HAO1Q9UJM8 370 aa9.96□□□□□ -0.82
CTDNEP1-212ENST00000576613 CHST2Q9Y4C5 530 aa9.96□□□□□ -0.82
CTDNEP1-212ENST00000576613 PCDHGB1Q9Y5G3 927 aa9.96□□□□□ -0.82
CTDNEP1-212ENST00000576613 A0A087WUJ7 227 aa9.95□□□□□ -0.82
CTDNEP1-212ENST00000576613 C17orf100A8MU93 164 aa9.95□□□□□ -0.82
CTDNEP1-212ENST00000576613 CLDN25C9JDP6 229 aa9.95□□□□□ -0.82
CTDNEP1-212ENST00000576613 PLPP2O43688 288 aa9.95□□□□□ -0.82
CTDNEP1-212ENST00000576613 CDC14BO60729 498 aa9.95□□□□□ -0.82
CTDNEP1-212ENST00000576613 MT-ND5P03915 603 aa9.95□□□□□ -0.82
CTDNEP1-212ENST00000576613 SERPINA5P05154 406 aa9.95□□□□□ -0.82
CTDNEP1-212ENST00000576613 ZCCHC18P0CG32 403 aa9.95□□□□□ -0.82
CTDNEP1-212ENST00000576613 ADRA2CP18825 462 aa9.95□□□□□ -0.82
CTDNEP1-212ENST00000576613 RAD52P43351 418 aa9.95□□□□□ -0.82
CTDNEP1-212ENST00000576613 MAGEB1P43366 347 aa9.95□□□□□ -0.82
CTDNEP1-212ENST00000576613 UBA52P62987 128 aaKnown RBP9.95□□□□□ -0.82
CTDNEP1-212ENST00000576613 CCL8P80075 99 aa9.95□□□□□ -0.82
CTDNEP1-212ENST00000576613 MVKQ03426 396 aa9.95□□□□□ -0.82
CTDNEP1-212ENST00000576613 PUDPQ08623 228 aa9.95□□□□□ -0.82
CTDNEP1-212ENST00000576613 RAB39AQ14964 217 aa9.95□□□□□ -0.82
CTDNEP1-212ENST00000576613 ALKBH6Q3KRA9 238 aa9.95□□□□□ -0.82
CTDNEP1-212ENST00000576613 AVPI1Q5T686 147 aa9.95□□□□□ -0.82
CTDNEP1-212ENST00000576613 RBMS3Q6XE24 437 aaKnown RBP9.95□□□□□ -0.82
CTDNEP1-212ENST00000576613 PIWIL3Q7Z3Z3 882 aaKnown RBP9.95□□□□□ -0.82
CTDNEP1-212ENST00000576613 TREML1Q86YW5 311 aa9.95□□□□□ -0.82
CTDNEP1-212ENST00000576613 LSMEM1Q8N8F7 131 aa9.95□□□□□ -0.82
CTDNEP1-212ENST00000576613 TIMD4Q96H15 378 aa9.95□□□□□ -0.82
CTDNEP1-212ENST00000576613 SORT1Q99523 831 aa9.95□□□□□ -0.82
CTDNEP1-212ENST00000576613 EPYCQ99645 322 aa9.95□□□□□ -0.82
CTDNEP1-212ENST00000576613 RMND5AQ9H871 391 aa9.95□□□□□ -0.82
CTDNEP1-212ENST00000576613 HINT3Q9NQE9 182 aaKnown RBP9.95□□□□□ -0.82
CTDNEP1-212ENST00000576613 SLC6A13Q9NSD5 602 aa9.95□□□□□ -0.82
CTDNEP1-212ENST00000576613 MED29Q9NX70 200 aa9.95□□□□□ -0.82
CTDNEP1-212ENST00000576613 SLCO1C1Q9NYB5 712 aa9.95□□□□□ -0.82
CTDNEP1-212ENST00000576613 NKIRAS2Q9NYR9 191 aa9.95□□□□□ -0.82
CTDNEP1-212ENST00000576613 ZNF224Q9NZL3 707 aa9.95□□□□□ -0.82
CTDNEP1-212ENST00000576613 SELENONQ9NZV5 590 aa9.95□□□□□ -0.82
CTDNEP1-212ENST00000576613 TAAR3PQ9P1P4 343 aa9.95□□□□□ -0.82
CTDNEP1-212ENST00000576613 GPR45Q9Y5Y3 372 aa9.95□□□□□ -0.82
CTDNEP1-212ENST00000576613 IGKV1D-42A0A075B6H8 117 aa9.94□□□□□ -0.82
CTDNEP1-212ENST00000576613 IGHV1-69-2A0A0G2JMI3 117 aa9.94□□□□□ -0.82
CTDNEP1-212ENST00000576613 A0A1B0GWA3 101 aa9.94□□□□□ -0.82
CTDNEP1-212ENST00000576613 C5orf58C9J3I9 102 aa9.94□□□□□ -0.82
CTDNEP1-212ENST00000576613 MS4A18H0YCH9 400 aa9.94□□□□□ -0.82
CTDNEP1-212ENST00000576613 TPD52L2O43399 206 aaKnown RBP9.94□□□□□ -0.82
CTDNEP1-212ENST00000576613 PRSS23O95084 383 aa9.94□□□□□ -0.82
CTDNEP1-212ENST00000576613 HPRP00739 348 aa9.94□□□□□ -0.82
CTDNEP1-212ENST00000576613 IGHV2-5P01817 119 aa9.94□□□□□ -0.82
CTDNEP1-212ENST00000576613 HLA-DOBP13765 273 aa9.94□□□□□ -0.82
CTDNEP1-212ENST00000576613 CRYBB2P43320 205 aa9.94□□□□□ -0.82
CTDNEP1-212ENST00000576613 CSNK1A1P48729 337 aa9.94□□□□□ -0.82
CTDNEP1-212ENST00000576613 NCALDP61601 193 aa9.94□□□□□ -0.82
CTDNEP1-212ENST00000576613 RBBP4Q09028 425 aa9.94□□□□□ -0.82
CTDNEP1-212ENST00000576613 ZP4Q12836 540 aa9.94□□□□□ -0.82
CTDNEP1-212ENST00000576613 STX3Q13277 289 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms