RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 KATNB1Q9BVA0 655 aa12.36□□□□□ -0.43
RPAIN-217ENST00000575711 LINC00470Q9BZP3 86 aa12.36□□□□□ -0.43
RPAIN-217ENST00000575711 OR52D1Q9H346 318 aa12.36□□□□□ -0.43
RPAIN-217ENST00000575711 SLC7A10Q9NS82 523 aa12.36□□□□□ -0.43
RPAIN-217ENST00000575711 ASB6Q9NWX5 421 aa12.36□□□□□ -0.43
RPAIN-217ENST00000575711 MALT1Q9UDY8 824 aa12.36□□□□□ -0.43
RPAIN-217ENST00000575711 CDH10Q9Y6N8 788 aa12.36□□□□□ -0.43
RPAIN-217ENST00000575711 MYO18BQ8IUG5 2567 aa12.35□□□□□ -0.43
RPAIN-217ENST00000575711 BAG2O95816 211 aa12.35□□□□□ -0.43
RPAIN-217ENST00000575711 CLDN1O95832 211 aa12.35□□□□□ -0.43
RPAIN-217ENST00000575711 IGHG1P01857 330 aa12.35□□□□□ -0.43
RPAIN-217ENST00000575711 PCYT1AP49585 367 aa12.35□□□□□ -0.43
RPAIN-217ENST00000575711 FXYD6P3P58550 94 aa12.35□□□□□ -0.43
RPAIN-217ENST00000575711 RPL27P61353 136 aaKnown RBP12.35□□□□□ -0.43
RPAIN-217ENST00000575711 ERVK-25P63136 954 aa12.35□□□□□ -0.43
RPAIN-217ENST00000575711 FAPQ12884 760 aa12.35□□□□□ -0.43
RPAIN-217ENST00000575711 P2RY6Q15077 328 aa12.35□□□□□ -0.43
RPAIN-217ENST00000575711 FAM205BPQ63HN1 556 aa12.35□□□□□ -0.43
RPAIN-217ENST00000575711 CD300LDQ6UXZ3 194 aa12.35□□□□□ -0.43
RPAIN-217ENST00000575711 THSD4Q6ZMP0 1018 aa12.35□□□□□ -0.43
RPAIN-217ENST00000575711 KIF18BQ86Y91 864 aa12.35□□□□□ -0.43
RPAIN-217ENST00000575711 TMEM123Q8N131 208 aa12.35□□□□□ -0.43
RPAIN-217ENST00000575711 PQLC1Q8N2U9 271 aa12.35□□□□□ -0.43
RPAIN-217ENST00000575711 GPR137CQ8N3F9 429 aa12.35□□□□□ -0.43
RPAIN-217ENST00000575711 CLDN22Q8N7P3 220 aa12.35□□□□□ -0.43
RPAIN-217ENST00000575711 OR52L1Q8NGH7 329 aa12.35□□□□□ -0.43
RPAIN-217ENST00000575711 OR6N1Q8NGY5 312 aa12.35□□□□□ -0.43
RPAIN-217ENST00000575711 DNAJC9Q8WXX5 260 aa12.35□□□□□ -0.43
RPAIN-217ENST00000575711 LRR1Q96L50 414 aa12.35□□□□□ -0.43
RPAIN-217ENST00000575711 SAMD8Q96LT4 415 aa12.35□□□□□ -0.43
RPAIN-217ENST00000575711 ALKBH3Q96Q83 286 aaPredicted RBP12.35□□□□□ -0.43
RPAIN-217ENST00000575711 B3GAT2Q9NPZ5 323 aa12.35□□□□□ -0.43
RPAIN-217ENST00000575711 GRHPRQ9UBQ7 328 aa12.35□□□□□ -0.43
RPAIN-217ENST00000575711 IL20RAQ9UHF4 553 aa12.35□□□□□ -0.43
RPAIN-217ENST00000575711 ZNF346Q9UL40 294 aaKnown RBP12.35□□□□□ -0.43
RPAIN-217ENST00000575711 OAZ3Q9UMX2 235 aa12.35□□□□□ -0.43
RPAIN-217ENST00000575711 MAGED1Q9Y5V3 778 aaPredicted RBP12.35□□□□□ -0.43
RPAIN-217ENST00000575711 A6NIZ1 184 aa12.34□□□□□ -0.43
RPAIN-217ENST00000575711 ZNF587BE7ETH6 402 aa12.34□□□□□ -0.43
RPAIN-217ENST00000575711 UPK3AO75631 287 aa12.34□□□□□ -0.43
RPAIN-217ENST00000575711 ACADSP16219 412 aa12.34□□□□□ -0.43
RPAIN-217ENST00000575711 ACVR1BP36896 505 aa12.34□□□□□ -0.43
RPAIN-217ENST00000575711 PEX19P40855 299 aa12.34□□□□□ -0.43
RPAIN-217ENST00000575711 CSNK1A1P48729 337 aa12.34□□□□□ -0.43
RPAIN-217ENST00000575711 RPS6KA3P51812 740 aa12.34□□□□□ -0.43
RPAIN-217ENST00000575711 CLRN1P58418 232 aa12.34□□□□□ -0.43
RPAIN-217ENST00000575711 RAP1BP61224 184 aa12.34□□□□□ -0.43
RPAIN-217ENST00000575711 RAP1AP62834 184 aa12.34□□□□□ -0.43
RPAIN-217ENST00000575711 SORDQ00796 357 aa12.34□□□□□ -0.43
RPAIN-217ENST00000575711 FAM27E3Q08E93 113 aa12.34□□□□□ -0.43
RPAIN-217ENST00000575711 ITGADQ13349 1161 aa12.34□□□□□ -0.43
RPAIN-217ENST00000575711 ARMC4Q5T2S8 1044 aa12.34□□□□□ -0.43
RPAIN-217ENST00000575711 GPR139Q6DWJ6 353 aa12.34□□□□□ -0.43
RPAIN-217ENST00000575711 KLHL17Q6TDP4 642 aa12.34□□□□□ -0.43
RPAIN-217ENST00000575711 CXorf67Q86X51 503 aaPredicted RBP12.34□□□□□ -0.43
RPAIN-217ENST00000575711 C20orf196Q8IYI0 205 aa12.34□□□□□ -0.43
RPAIN-217ENST00000575711 KISS1RQ969F8 398 aaPredicted RBP12.34□□□□□ -0.43
RPAIN-217ENST00000575711 ZNF570Q96NI8 536 aa12.34□□□□□ -0.43
RPAIN-217ENST00000575711 TSPAN32Q96QS1 320 aa12.34□□□□□ -0.43
RPAIN-217ENST00000575711 IFT27Q9BW83 186 aa12.34□□□□□ -0.43
RPAIN-217ENST00000575711 HDHD5Q9BXW7 423 aa12.34□□□□□ -0.43
RPAIN-217ENST00000575711 ENKD1Q9H0I2 346 aa12.34□□□□□ -0.43
RPAIN-217ENST00000575711 GABARAPL1Q9H0R8 117 aa12.34□□□□□ -0.43
RPAIN-217ENST00000575711 EGLN3Q9H6Z9 239 aa12.34□□□□□ -0.43
RPAIN-217ENST00000575711 NRIP3Q9NQ35 241 aa12.34□□□□□ -0.43
RPAIN-217ENST00000575711 NPDC1Q9NQX5 325 aaPredicted RBP12.34□□□□□ -0.43
RPAIN-217ENST00000575711 TBC1D23Q9NUY8 699 aa12.34□□□□□ -0.43
RPAIN-217ENST00000575711 TAS2R16Q9NYV7 291 aa12.34□□□□□ -0.43
RPAIN-217ENST00000575711 IL20Q9NYY1 176 aa12.34□□□□□ -0.43
RPAIN-217ENST00000575711 ADAM18Q9Y3Q7 739 aa12.34□□□□□ -0.43
RPAIN-217ENST00000575711 INTS1Q8N201 2190 aaKnown RBP12.33□□□□□ -0.44
RPAIN-217ENST00000575711 SAC3D1A6NKF1 404 aa12.33□□□□□ -0.44
RPAIN-217ENST00000575711 CENPBD1B2RD01 187 aa12.33□□□□□ -0.44
RPAIN-217ENST00000575711 C16orf97H3BN30 126 aa12.33□□□□□ -0.44
RPAIN-217ENST00000575711 H3BN98 237 aa12.33□□□□□ -0.44
RPAIN-217ENST00000575711 M0R3G1 203 aa12.33□□□□□ -0.44
RPAIN-217ENST00000575711 XKRYO14609 159 aa12.33□□□□□ -0.44
RPAIN-217ENST00000575711 RRP9O43818 475 aaKnown RBP12.33□□□□□ -0.44
RPAIN-217ENST00000575711 TRMUO75648 421 aaKnown RBP12.33□□□□□ -0.44
RPAIN-217ENST00000575711 SOX14O95416 240 aa12.33□□□□□ -0.44
RPAIN-217ENST00000575711 PPP1R3DO95685 299 aa12.33□□□□□ -0.44
RPAIN-217ENST00000575711 PGA4P0DJD7 388 aa12.33□□□□□ -0.44
RPAIN-217ENST00000575711 PGA3P0DJD8 388 aa12.33□□□□□ -0.44
RPAIN-217ENST00000575711 APEHP13798 732 aaKnown RBP12.33□□□□□ -0.44
RPAIN-217ENST00000575711 PSMB1P20618 241 aaKnown RBP12.33□□□□□ -0.44
RPAIN-217ENST00000575711 COX5AP20674 150 aa12.33□□□□□ -0.44
RPAIN-217ENST00000575711 IGHV1-2P23083 117 aa12.33□□□□□ -0.44
RPAIN-217ENST00000575711 IL32P24001 234 aa12.33□□□□□ -0.44
RPAIN-217ENST00000575711 GRNP28799 593 aaKnown RBP12.33□□□□□ -0.44
RPAIN-217ENST00000575711 MPGP29372 298 aa12.33□□□□□ -0.44
RPAIN-217ENST00000575711 SDHAP31040 664 aa12.33□□□□□ -0.44
RPAIN-217ENST00000575711 UGT2B10P36537 528 aa12.33□□□□□ -0.44
RPAIN-217ENST00000575711 ELF3P78545 371 aaPredicted RBP12.33□□□□□ -0.44
RPAIN-217ENST00000575711 RUNX1T1Q06455 604 aa12.33□□□□□ -0.44
RPAIN-217ENST00000575711 LGALS3BPQ08380 585 aa12.33□□□□□ -0.44
RPAIN-217ENST00000575711 CLEC12AQ5QGZ9 265 aa12.33□□□□□ -0.44
RPAIN-217ENST00000575711 SFRP5Q5T4F7 317 aa12.33□□□□□ -0.44
RPAIN-217ENST00000575711 FAHD1Q6P587 224 aa12.33□□□□□ -0.44
RPAIN-217ENST00000575711 STAC2Q6ZMT1 411 aa12.33□□□□□ -0.44
RPAIN-217ENST00000575711 FAM122BQ7Z309 247 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms