RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 C20orf196Q8IYI0 205 aa13.38□□□□□ -0.27
LITAF-217ENST00000575426 MOSPD2Q8NHP6 518 aa13.38□□□□□ -0.27
LITAF-217ENST00000575426 ZNF566Q969W8 418 aa13.38□□□□□ -0.27
LITAF-217ENST00000575426 PIK3IP1Q96FE7 263 aa13.38□□□□□ -0.27
LITAF-217ENST00000575426 SLC25A44Q96H78 314 aaPredicted RBP13.38□□□□□ -0.27
LITAF-217ENST00000575426 MUS81Q96NY9 551 aa13.38□□□□□ -0.27
LITAF-217ENST00000575426 TNFRSF13CQ96RJ3 184 aa13.38□□□□□ -0.27
LITAF-217ENST00000575426 CLEC4MQ9H2X3 399 aaPredicted RBP13.38□□□□□ -0.27
LITAF-217ENST00000575426 YY1AP1Q9H869 796 aa13.38□□□□□ -0.27
LITAF-217ENST00000575426 GPR35Q9HC97 309 aa13.38□□□□□ -0.27
LITAF-217ENST00000575426 PRR14LQ5THK1 2151 aa13.38□□□□□ -0.27
LITAF-217ENST00000575426 TRAV27A0A087WT01 109 aa13.37□□□□□ -0.27
LITAF-217ENST00000575426 SH3PXD2BA1X283 911 aa13.37□□□□□ -0.27
LITAF-217ENST00000575426 RPL36A-HNRNPH2H7BZ11 118 aa13.37□□□□□ -0.27
LITAF-217ENST00000575426 TNFRSF11BO00300 401 aa13.37□□□□□ -0.27
LITAF-217ENST00000575426 TSPAN19P0C672 248 aa13.37□□□□□ -0.27
LITAF-217ENST00000575426 RPL4P36578 427 aaKnown RBP13.37□□□□□ -0.27
LITAF-217ENST00000575426 MAGEA2P43356 314 aa13.37□□□□□ -0.27
LITAF-217ENST00000575426 SH3BGRP55822 239 aaPredicted RBP13.37□□□□□ -0.27
LITAF-217ENST00000575426 CLRN1P58418 232 aa13.37□□□□□ -0.27
LITAF-217ENST00000575426 CTXN1P60606 82 aa13.37□□□□□ -0.27
LITAF-217ENST00000575426 MELKQ14680 651 aa13.37□□□□□ -0.27
LITAF-217ENST00000575426 SEC23BQ15437 767 aa13.37□□□□□ -0.27
LITAF-217ENST00000575426 CEACAM16Q2WEN9 425 aa13.37□□□□□ -0.27
LITAF-217ENST00000575426 OR2T5Q6IEZ7 315 aa13.37□□□□□ -0.27
LITAF-217ENST00000575426 NHLRC1Q6VVB1 395 aa13.37□□□□□ -0.27
LITAF-217ENST00000575426 C22orf34Q6ZV56 151 aa13.37□□□□□ -0.27
LITAF-217ENST00000575426 TMEM123Q8N131 208 aa13.37□□□□□ -0.27
LITAF-217ENST00000575426 C17orf78Q8N4C9 275 aa13.37□□□□□ -0.27
LITAF-217ENST00000575426 LINC00471Q8N535 108 aa13.37□□□□□ -0.27
LITAF-217ENST00000575426 OR13C2Q8NGS9 318 aa13.37□□□□□ -0.27
LITAF-217ENST00000575426 OR2T29Q8NH02 315 aa13.37□□□□□ -0.27
LITAF-217ENST00000575426 OR52N5Q8NH56 324 aa13.37□□□□□ -0.27
LITAF-217ENST00000575426 CANT1Q8WVQ1 401 aa13.37□□□□□ -0.27
LITAF-217ENST00000575426 ULBP2Q9BZM5 246 aa13.37□□□□□ -0.27
LITAF-217ENST00000575426 LRMDAQ9H2I8 198 aa13.37□□□□□ -0.27
LITAF-217ENST00000575426 REEP1Q9H902 201 aa13.37□□□□□ -0.27
LITAF-217ENST00000575426 CRLF2Q9HC73 371 aa13.37□□□□□ -0.27
LITAF-217ENST00000575426 SLC7A8Q9UHI5 535 aa13.37□□□□□ -0.27
LITAF-217ENST00000575426 POFUT2Q9Y2G5 429 aa13.37□□□□□ -0.27
LITAF-217ENST00000575426 AMDHD2Q9Y303 409 aa13.37□□□□□ -0.27
LITAF-217ENST00000575426 FAM221AA4D161 298 aa13.36□□□□□ -0.27
LITAF-217ENST00000575426 UNC119BA6NIH7 251 aa13.36□□□□□ -0.27
LITAF-217ENST00000575426 GNGT2O14610 69 aa13.36□□□□□ -0.27
LITAF-217ENST00000575426 CIB2O75838 187 aa13.36□□□□□ -0.27
LITAF-217ENST00000575426 WNT11O96014 354 aa13.36□□□□□ -0.27
LITAF-217ENST00000575426 CST1P01037 141 aa13.36□□□□□ -0.27
LITAF-217ENST00000575426 IGHG1P01857 330 aa13.36□□□□□ -0.27
LITAF-217ENST00000575426 OMPP47874 163 aa13.36□□□□□ -0.27
LITAF-217ENST00000575426 HMGA2P52926 109 aa13.36□□□□□ -0.27
LITAF-217ENST00000575426 NR1H2P55055 460 aa13.36□□□□□ -0.27
LITAF-217ENST00000575426 UBE2NP61088 152 aaKnown RBP13.36□□□□□ -0.27
LITAF-217ENST00000575426 ACKR1Q16570 336 aa13.36□□□□□ -0.27
LITAF-217ENST00000575426 C1QTNF12Q5T7M4 302 aa13.36□□□□□ -0.27
LITAF-217ENST00000575426 ADGRG5Q8IZF4 528 aa13.36□□□□□ -0.27
LITAF-217ENST00000575426 OR1K1Q8NGR3 316 aa13.36□□□□□ -0.27
LITAF-217ENST00000575426 GNPDA2Q8TDQ7 276 aa13.36□□□□□ -0.27
LITAF-217ENST00000575426 PLPPR2Q96GM1 343 aa13.36□□□□□ -0.27
LITAF-217ENST00000575426 RSRC1Q96IZ7 334 aaKnown RBP13.36□□□□□ -0.27
LITAF-217ENST00000575426 FUZQ9BT04 418 aa13.36□□□□□ -0.27
LITAF-217ENST00000575426 CHID1Q9BWS9 393 aa13.36□□□□□ -0.27
LITAF-217ENST00000575426 TXNIPQ9H3M7 391 aa13.36□□□□□ -0.27
LITAF-217ENST00000575426 ESRP2Q9H6T0 727 aaKnown RBP13.36□□□□□ -0.27
LITAF-217ENST00000575426 SLC17A5Q9NRA2 495 aa13.36□□□□□ -0.27
LITAF-217ENST00000575426 EDARQ9UNE0 448 aa13.36□□□□□ -0.27
LITAF-217ENST00000575426 MAGED1Q9Y5V3 778 aaPredicted RBP13.36□□□□□ -0.27
LITAF-217ENST00000575426 ITPR2Q14571 2701 aa13.36□□□□□ -0.27
LITAF-217ENST00000575426 ABCA4P78363 2273 aa13.36□□□□□ -0.27
LITAF-217ENST00000575426 CDC42EP2O14613 210 aa13.35□□□□□ -0.27
LITAF-217ENST00000575426 KLF4O43474 513 aa13.35□□□□□ -0.27
LITAF-217ENST00000575426 NDUFB2O95178 105 aa13.35□□□□□ -0.27
LITAF-217ENST00000575426 HRGP04196 525 aa13.35□□□□□ -0.27
LITAF-217ENST00000575426 HOXB1P14653 301 aaPredicted RBP13.35□□□□□ -0.27
LITAF-217ENST00000575426 ACADSP16219 412 aa13.35□□□□□ -0.27
LITAF-217ENST00000575426 PAX7P23759 505 aa13.35□□□□□ -0.27
LITAF-217ENST00000575426 RPL27P61353 136 aaKnown RBP13.35□□□□□ -0.27
LITAF-217ENST00000575426 RPS4XP62701 263 aaKnown RBP13.35□□□□□ -0.27
LITAF-217ENST00000575426 ARF1P84077 181 aaKnown RBP13.35□□□□□ -0.27
LITAF-217ENST00000575426 TOP3AQ13472 1001 aaPredicted RBP13.35□□□□□ -0.27
LITAF-217ENST00000575426 C1orf146Q5VVC0 180 aa13.35□□□□□ -0.27
LITAF-217ENST00000575426 ANKRD16Q6P6B7 361 aa13.35□□□□□ -0.27
LITAF-217ENST00000575426 KLHL17Q6TDP4 642 aa13.35□□□□□ -0.27
LITAF-217ENST00000575426 LINGO2Q7L985 606 aa13.35□□□□□ -0.27
LITAF-217ENST00000575426 CDC20BQ86Y33 519 aa13.35□□□□□ -0.27
LITAF-217ENST00000575426 ASB10Q8WXI3 467 aa13.35□□□□□ -0.27
LITAF-217ENST00000575426 TMEM54Q969K7 222 aa13.35□□□□□ -0.27
LITAF-217ENST00000575426 LURAP1Q96LR2 239 aa13.35□□□□□ -0.27
LITAF-217ENST00000575426 GLTPQ9NZD2 209 aa13.35□□□□□ -0.27
LITAF-217ENST00000575426 ZNF346Q9UL40 294 aaKnown RBP13.35□□□□□ -0.27
LITAF-217ENST00000575426 SAMHD1Q9Y3Z3 626 aaKnown RBP13.35□□□□□ -0.27
LITAF-217ENST00000575426 LYVE1Q9Y5Y7 322 aa13.35□□□□□ -0.27
LITAF-217ENST00000575426 APCP25054 2843 aa13.34□□□□□ -0.27
LITAF-217ENST00000575426 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.34□□□□□ -0.27
LITAF-217ENST00000575426 A0A1W2PR80 420 aa13.34□□□□□ -0.27
LITAF-217ENST00000575426 TCRBV3S1A0A5B6 114 aa13.34□□□□□ -0.27
LITAF-217ENST00000575426 A6NIZ1 184 aa13.34□□□□□ -0.27
LITAF-217ENST00000575426 NPIPB13A6NJU9 1138 aa13.34□□□□□ -0.27
LITAF-217ENST00000575426 DEFB108AA8MXU0 73 aa13.34□□□□□ -0.27
LITAF-217ENST00000575426 ZNF99A8MXY4 864 aaPredicted RBP13.34□□□□□ -0.27
LITAF-217ENST00000575426 CENPBD1B2RD01 187 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms