RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 DCTN6O00399 190 aa25.57■■□□□ 1.68
CTDNEP1-210ENST00000574322 LIFP15018 202 aa25.57■■□□□ 1.68
CTDNEP1-210ENST00000574322 PYCR1P32322 319 aa25.57■■□□□ 1.68
CTDNEP1-210ENST00000574322 ACVR1BP36896 505 aa25.57■■□□□ 1.68
CTDNEP1-210ENST00000574322 RPS19P39019 145 aaKnown RBP25.57■■□□□ 1.68
CTDNEP1-210ENST00000574322 NAA10P41227 235 aaPredicted RBP25.57■■□□□ 1.68
CTDNEP1-210ENST00000574322 OR12D2P58182 307 aa25.57■■□□□ 1.68
CTDNEP1-210ENST00000574322 SELENBP1Q13228 472 aa25.57■■□□□ 1.68
CTDNEP1-210ENST00000574322 ZNF846Q147U1 533 aa25.57■■□□□ 1.68
CTDNEP1-210ENST00000574322 ZNF468Q5VIY5 522 aaPredicted RBP25.57■■□□□ 1.68
CTDNEP1-210ENST00000574322 IGF2-ASQ6U949 168 aa25.57■■□□□ 1.68
CTDNEP1-210ENST00000574322 SLC16A9Q7RTY1 509 aa25.57■■□□□ 1.68
CTDNEP1-210ENST00000574322 SMAP2Q8WU79 429 aaPredicted RBP25.57■■□□□ 1.68
CTDNEP1-210ENST00000574322 PSMF1Q92530 271 aa25.57■■□□□ 1.68
CTDNEP1-210ENST00000574322 KCTD7Q96MP8 289 aa25.57■■□□□ 1.68
CTDNEP1-210ENST00000574322 TSSK2Q96PF2 358 aa25.57■■□□□ 1.68
CTDNEP1-210ENST00000574322 WDR12Q9GZL7 423 aaKnown RBP25.57■■□□□ 1.68
CTDNEP1-210ENST00000574322 MARCH7Q9H992 704 aa25.57■■□□□ 1.68
CTDNEP1-210ENST00000574322 FKBP7Q9Y680 259 aa25.57■■□□□ 1.68
CTDNEP1-210ENST00000574322 SIRT4Q9Y6E7 314 aaPredicted RBP25.57■■□□□ 1.68
CTDNEP1-210ENST00000574322 A0A075B6Q4 140 aa25.56■■□□□ 1.68
CTDNEP1-210ENST00000574322 LOC101059948A0A1B0GTJ6 334 aa25.56■■□□□ 1.68
CTDNEP1-210ENST00000574322 A0A1W2PRG6 482 aa25.56■■□□□ 1.68
CTDNEP1-210ENST00000574322 ARHGEF9O43307 516 aa25.56■■□□□ 1.68
CTDNEP1-210ENST00000574322 SELENOFO60613 162 aa25.56■■□□□ 1.68
CTDNEP1-210ENST00000574322 TFPIP10646 304 aa25.56■■□□□ 1.68
CTDNEP1-210ENST00000574322 GTF2E2P29084 291 aaKnown RBP25.56■■□□□ 1.68
CTDNEP1-210ENST00000574322 CENPAP49450 140 aa25.56■■□□□ 1.68
CTDNEP1-210ENST00000574322 TBC1D25Q3MII6 688 aa25.56■■□□□ 1.68
CTDNEP1-210ENST00000574322 ACER2Q5QJU3 275 aa25.56■■□□□ 1.68
CTDNEP1-210ENST00000574322 TIGD4Q8IY51 512 aa25.56■■□□□ 1.68
CTDNEP1-210ENST00000574322 HCCSP53701 268 aa25.55■■□□□ 1.68
CTDNEP1-210ENST00000574322 DSCR4P56555 118 aaPredicted RBP25.55■■□□□ 1.68
CTDNEP1-210ENST00000574322 MYBPHQ13203 477 aa25.55■■□□□ 1.68
CTDNEP1-210ENST00000574322 TRAM1Q15629 374 aa25.55■■□□□ 1.68
CTDNEP1-210ENST00000574322 TIGD3Q6B0B8 471 aa25.55■■□□□ 1.68
CTDNEP1-210ENST00000574322 C22orf42Q6IC83 251 aa25.55■■□□□ 1.68
CTDNEP1-210ENST00000574322 MFSD4AQ8N468 514 aa25.55■■□□□ 1.68
CTDNEP1-210ENST00000574322 MNTQ99583 582 aa25.55■■□□□ 1.68
CTDNEP1-210ENST00000574322 SYT4Q9H2B2 425 aa25.55■■□□□ 1.68
CTDNEP1-210ENST00000574322 SRA1Q9HD15 236 aaKnown RBP25.55■■□□□ 1.68
CTDNEP1-210ENST00000574322 ASCL3Q9NQ33 180 aa25.55■■□□□ 1.68
CTDNEP1-210ENST00000574322 A0A1W2PNV4 684 aa25.54■■□□□ 1.68
CTDNEP1-210ENST00000574322 CDRT15L2A8MXV6 281 aa25.54■■□□□ 1.68
CTDNEP1-210ENST00000574322 IQCJ-SCHIP1C9J366 451 aaPredicted RBP25.54■■□□□ 1.68
CTDNEP1-210ENST00000574322 J3QLW9 94 aa25.54■■□□□ 1.68
CTDNEP1-210ENST00000574322 LRRTM2O43300 516 aa25.54■■□□□ 1.68
CTDNEP1-210ENST00000574322 ZNF19P17023 458 aa25.54■■□□□ 1.68
CTDNEP1-210ENST00000574322 ZNF239Q16600 458 aaKnown RBP25.54■■□□□ 1.68
CTDNEP1-210ENST00000574322 RFLNBQ8N5W9 214 aa25.54■■□□□ 1.68
CTDNEP1-210ENST00000574322 IP6K3Q96PC2 410 aa25.54■■□□□ 1.68
CTDNEP1-210ENST00000574322 COPS3Q9UNS2 423 aa25.54■■□□□ 1.68
CTDNEP1-210ENST00000574322 POLHQ9Y253 713 aa25.54■■□□□ 1.68
CTDNEP1-210ENST00000574322 A6NIZ1 184 aa25.54■■□□□ 1.68
CTDNEP1-210ENST00000574322 E9PI62 339 aa25.54■■□□□ 1.68
CTDNEP1-210ENST00000574322 H3BML4 177 aa25.54■■□□□ 1.68
CTDNEP1-210ENST00000574322 H7C1C5 153 aa25.54■■□□□ 1.68
CTDNEP1-210ENST00000574322 CD82P27701 267 aa25.54■■□□□ 1.68
CTDNEP1-210ENST00000574322 RAP1BP61224 184 aa25.54■■□□□ 1.68
CTDNEP1-210ENST00000574322 LCN6P62502 163 aa25.54■■□□□ 1.68
CTDNEP1-210ENST00000574322 RAP1AP62834 184 aa25.54■■□□□ 1.68
CTDNEP1-210ENST00000574322 FAM205BPQ63HN1 556 aa25.54■■□□□ 1.68
CTDNEP1-210ENST00000574322 DMKNQ6E0U4 476 aaPredicted RBP25.54■■□□□ 1.68
CTDNEP1-210ENST00000574322 PXKQ7Z7A4 578 aa25.54■■□□□ 1.68
CTDNEP1-210ENST00000574322 PM20D2Q8IYS1 436 aa25.54■■□□□ 1.68
CTDNEP1-210ENST00000574322 ZNF511Q8NB15 262 aa25.54■■□□□ 1.68
CTDNEP1-210ENST00000574322 OR1J4Q8NGS1 313 aa25.54■■□□□ 1.68
CTDNEP1-210ENST00000574322 THAP4Q8WY91 577 aa25.54■■□□□ 1.68
CTDNEP1-210ENST00000574322 SACM1LQ9NTJ5 587 aa25.54■■□□□ 1.68
CTDNEP1-210ENST00000574322 HDGFL3Q9Y3E1 203 aa25.54■■□□□ 1.68
CTDNEP1-210ENST00000574322 OGG1O15527 345 aa25.53■■□□□ 1.68
CTDNEP1-210ENST00000574322 PLGP00747 810 aaPredicted RBP25.53■■□□□ 1.68
CTDNEP1-210ENST00000574322 CD1AP06126 327 aa25.53■■□□□ 1.68
CTDNEP1-210ENST00000574322 DAP3P51398 398 aaKnown RBP25.53■■□□□ 1.68
CTDNEP1-210ENST00000574322 RORCP51449 518 aa25.53■■□□□ 1.68
CTDNEP1-210ENST00000574322 BLVRAP53004 296 aa25.53■■□□□ 1.68
CTDNEP1-210ENST00000574322 TLE3Q04726 772 aa25.53■■□□□ 1.68
CTDNEP1-210ENST00000574322 GLYR1Q49A26 553 aaPredicted RBP25.53■■□□□ 1.68
CTDNEP1-210ENST00000574322 ZNF684Q5T5D7 378 aa25.53■■□□□ 1.68
CTDNEP1-210ENST00000574322 B3GNTL1Q67FW5 361 aaPredicted RBP25.53■■□□□ 1.68
CTDNEP1-210ENST00000574322 NUAK2Q9H093 628 aa25.53■■□□□ 1.68
CTDNEP1-210ENST00000574322 TRAPPC4Q9Y296 219 aa25.53■■□□□ 1.68
CTDNEP1-210ENST00000574322 GABRPO00591 440 aa25.52■■□□□ 1.68
CTDNEP1-210ENST00000574322 CBR3O75828 277 aa25.52■■□□□ 1.68
CTDNEP1-210ENST00000574322 BMP4P12644 408 aa25.52■■□□□ 1.68
CTDNEP1-210ENST00000574322 DPP4P27487 766 aa25.52■■□□□ 1.68
CTDNEP1-210ENST00000574322 ATP1A4Q13733 1029 aa25.52■■□□□ 1.68
CTDNEP1-210ENST00000574322 LYPD4Q6UWN0 246 aa25.52■■□□□ 1.68
CTDNEP1-210ENST00000574322 NHLRC1Q6VVB1 395 aa25.52■■□□□ 1.68
CTDNEP1-210ENST00000574322 MDGA2Q7Z553 956 aa25.52■■□□□ 1.68
CTDNEP1-210ENST00000574322 ASB10Q8WXI3 467 aa25.52■■□□□ 1.68
CTDNEP1-210ENST00000574322 SLC25A46Q96AG3 418 aa25.52■■□□□ 1.68
CTDNEP1-210ENST00000574322 PELI1Q96FA3 418 aa25.52■■□□□ 1.68
CTDNEP1-210ENST00000574322 TMED9Q9BVK6 235 aa25.52■■□□□ 1.68
CTDNEP1-210ENST00000574322 ST6GALNAC2Q9UJ37 374 aa25.52■■□□□ 1.68
CTDNEP1-210ENST00000574322 B9D1Q9UPM9 204 aa25.52■■□□□ 1.68
CTDNEP1-210ENST00000574322 PEX16Q9Y5Y5 336 aa25.52■■□□□ 1.68
CTDNEP1-210ENST00000574322 CACNA1AO00555 2505 aa25.52■■□□□ 1.68
CTDNEP1-210ENST00000574322 SLC22A23A1A5C7 686 aa25.51■■□□□ 1.68
CTDNEP1-210ENST00000574322 FAM171A2A8MVW0 826 aa25.51■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms