RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 GALNT5Q7Z7M9 940 aa11.75□□□□□ -0.53
CCDC40-205ENST00000571028 UBE2J2Q8N2K1 259 aa11.75□□□□□ -0.53
CCDC40-205ENST00000571028 OR13C2Q8NGS9 318 aa11.75□□□□□ -0.53
CCDC40-205ENST00000571028 OR6K3Q8NGY3 331 aa11.75□□□□□ -0.53
CCDC40-205ENST00000571028 OR6S1Q8NH40 331 aa11.75□□□□□ -0.53
CCDC40-205ENST00000571028 OR51A7Q8NH64 312 aa11.75□□□□□ -0.53
CCDC40-205ENST00000571028 SLCO4A1Q96BD0 722 aa11.75□□□□□ -0.53
CCDC40-205ENST00000571028 FAM46AQ96IP4 442 aaKnown RBP11.75□□□□□ -0.53
CCDC40-205ENST00000571028 OXGR1Q96P68 337 aa11.75□□□□□ -0.53
CCDC40-205ENST00000571028 ZNF385AQ96PM9 386 aaKnown RBP11.75□□□□□ -0.53
CCDC40-205ENST00000571028 ANKRD19PQ9H560 264 aa11.75□□□□□ -0.53
CCDC40-205ENST00000571028 REEP1Q9H902 201 aa11.75□□□□□ -0.53
CCDC40-205ENST00000571028 BCO1Q9HAY6 547 aa11.75□□□□□ -0.53
CCDC40-205ENST00000571028 VNN3Q9NY84 501 aa11.75□□□□□ -0.53
CCDC40-205ENST00000571028 MRPL39Q9NYK5 338 aaKnown RBP11.75□□□□□ -0.53
CCDC40-205ENST00000571028 PRSS50Q9UI38 385 aa11.75□□□□□ -0.53
CCDC40-205ENST00000571028 FLVCR1Q9Y5Y0 555 aa11.75□□□□□ -0.53
CCDC40-205ENST00000571028 TRAV27A0A087WT01 109 aa11.74□□□□□ -0.53
CCDC40-205ENST00000571028 SH3PXD2BA1X283 911 aa11.74□□□□□ -0.53
CCDC40-205ENST00000571028 ZNF724A8MTY0 619 aa11.74□□□□□ -0.53
CCDC40-205ENST00000571028 PLPP3O14495 311 aa11.74□□□□□ -0.53
CCDC40-205ENST00000571028 MSTNO14793 375 aa11.74□□□□□ -0.53
CCDC40-205ENST00000571028 SIAH2O43255 324 aa11.74□□□□□ -0.53
CCDC40-205ENST00000571028 MRPL33O75394 65 aaKnown RBP11.74□□□□□ -0.53
CCDC40-205ENST00000571028 CCNB2O95067 398 aa11.74□□□□□ -0.53
CCDC40-205ENST00000571028 HPRP00739 348 aa11.74□□□□□ -0.53
CCDC40-205ENST00000571028 F13BP05160 661 aa11.74□□□□□ -0.53
CCDC40-205ENST00000571028 EDNRAP25101 427 aa11.74□□□□□ -0.53
CCDC40-205ENST00000571028 AQP2P41181 271 aa11.74□□□□□ -0.53
CCDC40-205ENST00000571028 MAGEA2P43356 314 aa11.74□□□□□ -0.53
CCDC40-205ENST00000571028 POU3F1Q03052 451 aaPredicted RBP11.74□□□□□ -0.53
CCDC40-205ENST00000571028 PRKCDQ05655 676 aa11.74□□□□□ -0.53
CCDC40-205ENST00000571028 KRTAP1-1Q07627 177 aa11.74□□□□□ -0.53
CCDC40-205ENST00000571028 PUDPQ08623 228 aa11.74□□□□□ -0.53
CCDC40-205ENST00000571028 FAM27E3Q08E93 113 aa11.74□□□□□ -0.53
CCDC40-205ENST00000571028 PDK3Q15120 406 aa11.74□□□□□ -0.53
CCDC40-205ENST00000571028 GUSBP1Q15486 140 aa11.74□□□□□ -0.53
CCDC40-205ENST00000571028 CARD17Q5XLA6 110 aa11.74□□□□□ -0.53
CCDC40-205ENST00000571028 NIPAL3Q6P499 406 aa11.74□□□□□ -0.53
CCDC40-205ENST00000571028 IGFN1Q86VF2 1251 aa11.74□□□□□ -0.53
CCDC40-205ENST00000571028 HIPK1Q86Z02 1210 aa11.74□□□□□ -0.53
CCDC40-205ENST00000571028 UEVLDQ8IX04 471 aa11.74□□□□□ -0.53
CCDC40-205ENST00000571028 RNF113BQ8IZP6 322 aaKnown RBP11.74□□□□□ -0.53
CCDC40-205ENST00000571028 MOSPD2Q8NHP6 518 aa11.74□□□□□ -0.53
CCDC40-205ENST00000571028 APH1AQ96BI3 265 aa11.74□□□□□ -0.53
CCDC40-205ENST00000571028 ZC3HAV1LQ96H79 300 aaKnown RBP11.74□□□□□ -0.53
CCDC40-205ENST00000571028 DHRS1Q96LJ7 313 aa11.74□□□□□ -0.53
CCDC40-205ENST00000571028 TACO1Q9BSH4 297 aaKnown RBP11.74□□□□□ -0.53
CCDC40-205ENST00000571028 SF3B5Q9BWJ5 86 aaKnown RBP11.74□□□□□ -0.53
CCDC40-205ENST00000571028 KRCC1Q9NPI7 259 aaPredicted RBP11.74□□□□□ -0.53
CCDC40-205ENST00000571028 ZNF229Q9UJW7 825 aa11.74□□□□□ -0.53
CCDC40-205ENST00000571028 B3GALT5Q9Y2C3 310 aa11.74□□□□□ -0.53
CCDC40-205ENST00000571028 SAMHD1Q9Y3Z3 626 aaKnown RBP11.74□□□□□ -0.53
CCDC40-205ENST00000571028 LYVE1Q9Y5Y7 322 aa11.74□□□□□ -0.53
CCDC40-205ENST00000571028 CHD3Q12873 2000 aaKnown RBP11.74□□□□□ -0.53
CCDC40-205ENST00000571028 ARID1AO14497 2285 aa11.74□□□□□ -0.53
CCDC40-205ENST00000571028 IGKV3D-15A0A087WSY6 115 aa11.73□□□□□ -0.53
CCDC40-205ENST00000571028 KRT36O76013 467 aa11.73□□□□□ -0.53
CCDC40-205ENST00000571028 VAMP5O95183 116 aa11.73□□□□□ -0.53
CCDC40-205ENST00000571028 CGAP01215 116 aa11.73□□□□□ -0.53
CCDC40-205ENST00000571028 POU2F1P14859 743 aa11.73□□□□□ -0.53
CCDC40-205ENST00000571028 NTF4P34130 210 aa11.73□□□□□ -0.53
CCDC40-205ENST00000571028 CD79BP40259 229 aa11.73□□□□□ -0.53
CCDC40-205ENST00000571028 SLC16A1P53985 500 aa11.73□□□□□ -0.53
CCDC40-205ENST00000571028 MELKQ14680 651 aa11.73□□□□□ -0.53
CCDC40-205ENST00000571028 CLEC12BQ2HXU8 276 aa11.73□□□□□ -0.53
CCDC40-205ENST00000571028 ZNF474Q6S9Z5 364 aaPredicted RBP11.73□□□□□ -0.53
CCDC40-205ENST00000571028 CREB3L2Q70SY1 520 aa11.73□□□□□ -0.53
CCDC40-205ENST00000571028 OAFQ86UD1 273 aa11.73□□□□□ -0.53
CCDC40-205ENST00000571028 STK32CQ86UX6 486 aa11.73□□□□□ -0.53
CCDC40-205ENST00000571028 EPHX4Q8IUS5 362 aa11.73□□□□□ -0.53
CCDC40-205ENST00000571028 ZIC4Q8N9L1 334 aa11.73□□□□□ -0.53
CCDC40-205ENST00000571028 SCAIQ8N9R8 606 aa11.73□□□□□ -0.53
CCDC40-205ENST00000571028 OR9Q2Q8NGE9 314 aa11.73□□□□□ -0.53
CCDC40-205ENST00000571028 TXNDC15Q96J42 360 aa11.73□□□□□ -0.53
CCDC40-205ENST00000571028 DOCK7Q96N67 2140 aa11.73□□□□□ -0.53
CCDC40-205ENST00000571028 HS3ST6Q96QI5 342 aa11.73□□□□□ -0.53
CCDC40-205ENST00000571028 TNFRSF13CQ96RJ3 184 aa11.73□□□□□ -0.53
CCDC40-205ENST00000571028 EMC6Q9BV81 110 aa11.73□□□□□ -0.53
CCDC40-205ENST00000571028 YY1AP1Q9H869 796 aa11.73□□□□□ -0.53
CCDC40-205ENST00000571028 PLSCR4Q9NRQ2 329 aa11.73□□□□□ -0.53
CCDC40-205ENST00000571028 MED29Q9NX70 200 aa11.73□□□□□ -0.53
CCDC40-205ENST00000571028 TAS2R5Q9NYW4 299 aa11.73□□□□□ -0.53
CCDC40-205ENST00000571028 B3GAT1Q9P2W7 334 aa11.73□□□□□ -0.53
CCDC40-205ENST00000571028 TMEM5Q9Y2B1 443 aa11.73□□□□□ -0.53
CCDC40-205ENST00000571028 AP4S1Q9Y587 144 aa11.73□□□□□ -0.53
CCDC40-205ENST00000571028 UNC119BA6NIH7 251 aa11.72□□□□□ -0.53
CCDC40-205ENST00000571028 CDC42EP2O14613 210 aa11.72□□□□□ -0.53
CCDC40-205ENST00000571028 TMCC2O75069 709 aa11.72□□□□□ -0.53
CCDC40-205ENST00000571028 E2F6O75461 281 aa11.72□□□□□ -0.53
CCDC40-205ENST00000571028 KRT33AO76009 404 aa11.72□□□□□ -0.53
CCDC40-205ENST00000571028 ASAH2BP0C7U1 165 aa11.72□□□□□ -0.53
CCDC40-205ENST00000571028 PAX1P15863 534 aa11.72□□□□□ -0.53
CCDC40-205ENST00000571028 OMPP47874 163 aa11.72□□□□□ -0.53
CCDC40-205ENST00000571028 SELENOPP49908 381 aa11.72□□□□□ -0.53
CCDC40-205ENST00000571028 RPL18Q07020 188 aaKnown RBP11.72□□□□□ -0.53
CCDC40-205ENST00000571028 LGALS3BPQ08380 585 aa11.72□□□□□ -0.53
CCDC40-205ENST00000571028 TOP3AQ13472 1001 aaPredicted RBP11.72□□□□□ -0.53
CCDC40-205ENST00000571028 TSC22D1Q15714 1073 aa11.72□□□□□ -0.53
CCDC40-205ENST00000571028 C9orf135Q5VTT2 229 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms