RNA–Protein interactions for RNA: ENST00000570546.5

CIITA-204, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 5,342 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-204ENST00000570546 HRH4Q9H3N8 390 aa14.13□□□□□ -0.15
CIITA-204ENST00000570546 FANCFQ9NPI8 374 aa14.13□□□□□ -0.15
CIITA-204ENST00000570546 A0A0A6YYJ9 748 aa14.12□□□□□ -0.15
CIITA-204ENST00000570546 TSPAN11A1L157 253 aa14.12□□□□□ -0.15
CIITA-204ENST00000570546 FGF17O60258 216 aa14.12□□□□□ -0.15
CIITA-204ENST00000570546 FADS1O60427 444 aa14.12□□□□□ -0.15
CIITA-204ENST00000570546 SNAPINO95295 136 aa14.12□□□□□ -0.15
CIITA-204ENST00000570546 EIF4EP06730 217 aaKnown RBP14.12□□□□□ -0.15
CIITA-204ENST00000570546 S100A11P31949 105 aa14.12□□□□□ -0.15
CIITA-204ENST00000570546 CCR2P41597 374 aa14.12□□□□□ -0.15
CIITA-204ENST00000570546 ARF1P84077 181 aaKnown RBP14.12□□□□□ -0.15
CIITA-204ENST00000570546 MPEG1Q2M385 716 aa14.12□□□□□ -0.15
CIITA-204ENST00000570546 LINC00346Q8IVM7 164 aa14.12□□□□□ -0.15
CIITA-204ENST00000570546 OR56B1Q8NGI3 324 aa14.12□□□□□ -0.15
CIITA-204ENST00000570546 SRRQ9GZT4 340 aa14.12□□□□□ -0.15
CIITA-204ENST00000570546 KRBOX1C9JBD0 128 aa14.12□□□□□ -0.15
CIITA-204ENST00000570546 CXCL10P02778 98 aa14.12□□□□□ -0.15
CIITA-204ENST00000570546 ANXA7P20073 488 aaKnown RBP14.12□□□□□ -0.15
CIITA-204ENST00000570546 CD22P20273 847 aa14.12□□□□□ -0.15
CIITA-204ENST00000570546 IHHQ14623 411 aa14.12□□□□□ -0.15
CIITA-204ENST00000570546 ZNF529Q6P280 563 aa14.12□□□□□ -0.15
CIITA-204ENST00000570546 CD300LGQ6UXG3 332 aa14.12□□□□□ -0.15
CIITA-204ENST00000570546 PLPP7Q8NBV4 271 aa14.12□□□□□ -0.15
CIITA-204ENST00000570546 RAB3CQ96E17 227 aa14.12□□□□□ -0.15
CIITA-204ENST00000570546 MMACHCQ9Y4U1 282 aa14.12□□□□□ -0.15
CIITA-204ENST00000570546 GABARAPH6UMI1 98 aa14.12□□□□□ -0.15
CIITA-204ENST00000570546 ALX3O95076 343 aa14.12□□□□□ -0.15
CIITA-204ENST00000570546 PDGFAP04085 211 aa14.12□□□□□ -0.15
CIITA-204ENST00000570546 EEF1A1P68104 462 aaKnown RBP14.12□□□□□ -0.15
CIITA-204ENST00000570546 PFDN5Q99471 154 aa14.12□□□□□ -0.15
CIITA-204ENST00000570546 UPK1AO00322 258 aa14.12□□□□□ -0.15
CIITA-204ENST00000570546 KCNK2O95069 426 aa14.12□□□□□ -0.15
CIITA-204ENST00000570546 CALCBP10092 127 aa14.12□□□□□ -0.15
CIITA-204ENST00000570546 GLYATL3Q5SZD4 288 aa14.12□□□□□ -0.15
CIITA-204ENST00000570546 NKAIN2Q5VXU1 208 aa14.12□□□□□ -0.15
CIITA-204ENST00000570546 CCDC190Q86UF4 302 aa14.12□□□□□ -0.15
CIITA-204ENST00000570546 ARPC5LQ9BPX5 153 aa14.12□□□□□ -0.15
CIITA-204ENST00000570546 MRPS28Q9Y2Q9 187 aaKnown RBP14.12□□□□□ -0.15
CIITA-204ENST00000570546 HOXB9P17482 250 aaPredicted RBP14.11□□□□□ -0.15
CIITA-204ENST00000570546 DYRK1AQ13627 763 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 CDKN3Q16667 212 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 SLC16A12Q6ZSM3 486 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 ADGRE4PQ86SQ3 457 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 OR10K1Q8NGX5 313 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 OR1S1Q8NH92 325 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 RBPMSQ93062 196 aaKnown RBP14.11□□□□□ -0.15
CIITA-204ENST00000570546 TMEM59Q9BXS4 323 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 B3GNT2Q9NY97 397 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 DHCR7Q9UBM7 475 aaKnown RBP14.11□□□□□ -0.15
CIITA-204ENST00000570546 HS3ST3A1Q9Y663 406 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 CXorf51AA0A1B0GTR3 108 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 LAMTOR5O43504 91 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 MYOGP15173 224 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 RAB6AP20340 208 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 ETV6P41212 452 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 CLDN20P56880 219 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 OR10A3P58181 314 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 TPBGQ13641 420 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 EXOSC6Q5RKV6 272 aaKnown RBP14.11□□□□□ -0.15
CIITA-204ENST00000570546 PLCXD3Q63HM9 321 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 C12orf73Q69YU5 71 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 ANKRD53Q8N9V6 530 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 OR52I2Q8NH67 350 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 NICN1Q9BSH3 213 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 IGLV3-16A0A075B6K0 115 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 LOC102725191A0A1B0GVB3 256 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 TNFRSF10CO14798 259 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 SIX6O95475 246 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 NAGAP17050 411 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 CX3CR1P49238 355 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 BIDP55957 195 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 Q6ZTK2 550 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 LRRC18Q8N456 261 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 DNAAF1Q8NEP3 725 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 NEURL2Q9BR09 285 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 SLCO5A1Q9H2Y9 848 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 A0A0B4J2A0 478 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 OR5K3A6NET4 321 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 H0Y8X5 98 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 RAC2P15153 192 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 CD53P19397 219 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 TIGD3Q6B0B8 471 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 SVBPQ8N300 66 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 SLC22A24Q8N4F4 322 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 NANOS1Q8WY41 292 aaKnown RBP14.11□□□□□ -0.15
CIITA-204ENST00000570546 CSF3RQ99062 836 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 SHPKQ9UHJ6 478 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 GPR55Q9Y2T6 319 aaPredicted RBP14.11□□□□□ -0.15
CIITA-204ENST00000570546 A0A0A6YYD5 115 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 ATG12O94817 140 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 PMS2P2O95744 297 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 CD79AP11912 226 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 TGM1P22735 817 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 TMEM176BQ3YBM2 270 aaPredicted RBP14.11□□□□□ -0.15
CIITA-204ENST00000570546 OR6M1Q8NGM8 313 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 OR13C5Q8NGS8 318 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 ATF6BQ99941 703 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 ULBP2Q9BZM5 246 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 POFUT1Q9H488 388 aa14.11□□□□□ -0.15
CIITA-204ENST00000570546 ISG20L2Q9H9L3 353 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms