RNA–Protein interactions for RNA: ENST00000570001.5

PDXDC1-217, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 4,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-217ENST00000570001 PELI1Q96FA3 418 aa10.59□□□□□ -0.71
PDXDC1-217ENST00000570001 B3GNT4Q9C0J1 378 aa10.59□□□□□ -0.71
PDXDC1-217ENST00000570001 ZDBF2Q9HCK1 2354 aa10.59□□□□□ -0.71
PDXDC1-217ENST00000570001 TMEM212A6NML5 194 aa10.59□□□□□ -0.71
PDXDC1-217ENST00000570001 MEN1O00255 615 aa10.59□□□□□ -0.71
PDXDC1-217ENST00000570001 TRAPPC6AO75865 159 aa10.59□□□□□ -0.71
PDXDC1-217ENST00000570001 NGFRP08138 427 aa10.59□□□□□ -0.71
PDXDC1-217ENST00000570001 SPNP16150 400 aa10.59□□□□□ -0.71
PDXDC1-217ENST00000570001 PTBP1P26599 531 aaKnown RBP eCLIP10.59□□□□□ -0.71
PDXDC1-217ENST00000570001 ZNF85Q03923 595 aa10.59□□□□□ -0.71
PDXDC1-217ENST00000570001 MAB21L1Q13394 359 aa10.59□□□□□ -0.71
PDXDC1-217ENST00000570001 MTFR2Q6P444 385 aa10.59□□□□□ -0.71
PDXDC1-217ENST00000570001 C9orf40Q8IXQ3 194 aa10.59□□□□□ -0.71
PDXDC1-217ENST00000570001 LGALS14Q8TCE9 139 aa10.59□□□□□ -0.71
PDXDC1-217ENST00000570001 AKAP1Q92667 903 aaKnown RBP eCLIP10.59□□□□□ -0.719e-9■■■■■ 46.9
PDXDC1-217ENST00000570001 NEDD4LQ96PU5 975 aa10.59□□□□□ -0.71
PDXDC1-217ENST00000570001 ELL3Q9HB65 397 aaPredicted RBP10.59□□□□□ -0.71
PDXDC1-217ENST00000570001 GPN1Q9HCN4 374 aaPredicted RBP10.59□□□□□ -0.71
PDXDC1-217ENST00000570001 MRPL15Q9P015 296 aaKnown RBP10.59□□□□□ -0.71
PDXDC1-217ENST00000570001 CACNG2Q9Y698 323 aa10.59□□□□□ -0.71
PDXDC1-217ENST00000570001 ZNF24P17028 368 aa10.59□□□□□ -0.71
PDXDC1-217ENST00000570001 CSF2RBP32927 897 aa10.59□□□□□ -0.71
PDXDC1-217ENST00000570001 CDKN2AP42771 156 aaKnown RBP10.59□□□□□ -0.71
PDXDC1-217ENST00000570001 CLDN12P56749 244 aa10.59□□□□□ -0.71
PDXDC1-217ENST00000570001 SGCBQ16585 318 aa10.59□□□□□ -0.71
PDXDC1-217ENST00000570001 OPN5Q6U736 354 aa10.59□□□□□ -0.71
PDXDC1-217ENST00000570001 OR13C3Q8NGS6 347 aa10.59□□□□□ -0.71
PDXDC1-217ENST00000570001 TMEM106AQ96A25 262 aa10.59□□□□□ -0.71
PDXDC1-217ENST00000570001 ZNF501Q96CX3 271 aaPredicted RBP10.59□□□□□ -0.71
PDXDC1-217ENST00000570001 MRI1Q9BV20 369 aa10.59□□□□□ -0.71
PDXDC1-217ENST00000570001 BEX1Q9HBH7 125 aa10.59□□□□□ -0.71
PDXDC1-217ENST00000570001 HIF3AQ9Y2N7 669 aa10.59□□□□□ -0.71
PDXDC1-217ENST00000570001 FANCMQ8IYD8 2048 aa10.59□□□□□ -0.71
PDXDC1-217ENST00000570001 NSG1A0A0A6YYJ2 146 aa10.59□□□□□ -0.71
PDXDC1-217ENST00000570001 A0A1B0GVI7 797 aa10.59□□□□□ -0.71
PDXDC1-217ENST00000570001 APOBEC1P41238 236 aaKnown RBP10.59□□□□□ -0.71
PDXDC1-217ENST00000570001 TOMM34Q15785 309 aaPredicted RBP10.59□□□□□ -0.71
PDXDC1-217ENST00000570001 EEF1A1P5Q5VTE0 462 aa10.59□□□□□ -0.71
PDXDC1-217ENST00000570001 PWWP2BQ6NUJ5 590 aa10.59□□□□□ -0.71
PDXDC1-217ENST00000570001 FCRLAQ7L513 359 aa10.59□□□□□ -0.71
PDXDC1-217ENST00000570001 LSRQ86X29 649 aaPredicted RBP10.59□□□□□ -0.71
PDXDC1-217ENST00000570001 EXO5Q9H790 373 aa10.59□□□□□ -0.71
PDXDC1-217ENST00000570001 NPIPA2E9PIF3 369 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 NPIPA3F8WFD2 350 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 SULT2B1O00204 365 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 ECDO95905 644 aaPredicted RBP10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 MSL3P1P0C860 447 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 APEHP13798 732 aaKnown RBP10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 SLC6A9P48067 706 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 TATDN3Q17R31 274 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 OR4D9Q8NGE8 314 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 ST8SIA1Q92185 356 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 TRIM63Q969Q1 353 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 QPCTLQ9NXS2 382 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 IMPA2O14732 288 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 DDAH2O95865 285 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 FCER2P06734 321 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 GUSBP08236 651 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 STOMP27105 288 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 LYPD4Q6UWN0 246 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 H1FNTQ75WM6 255 aaPredicted RBP10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 ANKRD37Q7Z713 158 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 NPEPL1Q8NDH3 523 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 PLPP5Q8NEB5 264 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 OR2I1PQ8NGU4 316 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 SYNPRQ8TBG9 265 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 SEMA4CQ9C0C4 833 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 CHRNA10Q9GZZ6 450 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 GALNT9Q9HCQ5 603 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 ABI3Q9P2A4 366 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 PTPRZ1P23471 2315 aaPredicted RBP10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 OR2J2O76002 312 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 LDOC1O95751 146 aaPredicted RBP10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 C4BPBP20851 252 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 NR4A2P43354 598 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 FOXL2P58012 376 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 P2RY14Q15391 338 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 SGCAQ16586 387 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 C19orf48Q6RUI8 117 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 TP63Q9H3D4 680 aaPredicted RBP10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 NUDT15Q9NV35 164 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 KLHL9Q9P2J3 617 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 RABL2AQ9UBK7 228 aaPredicted RBP10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 SPATA2Q9UM82 520 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 RABL2BQ9UNT1 228 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 KIAA1549LQ6ZVL6 1849 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 ALPK2Q86TB3 2170 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 A0A1B0GTQ1 180 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 MSX1P28360 303 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 SLC25A1P53007 311 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 DMWDQ09019 674 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 RAB11BQ15907 218 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 UBE2NLQ5JXB2 153 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 BCL2L15Q5TBC7 163 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 OVCH1Q7RTY7 1134 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 FAM210AQ96ND0 272 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 IER2Q9BTL4 223 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 CLEC4MQ9H2X3 399 aaPredicted RBP10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 C12orf10Q9HB07 376 aa10.58□□□□□ -0.72
PDXDC1-217ENST00000570001 PRSS37A4D1T9 235 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms