RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 SLC41A3Q96GZ6 507 aa13.34□□□□□ -0.27
NME3-211ENST00000568561 ULBP2Q9BZM5 246 aa13.34□□□□□ -0.27
NME3-211ENST00000568561 SLAMF8Q9P0V8 285 aa13.34□□□□□ -0.27
NME3-211ENST00000568561 POFUT2Q9Y2G5 429 aa13.34□□□□□ -0.27
NME3-211ENST00000568561 NOX1Q9Y5S8 564 aa13.34□□□□□ -0.27
NME3-211ENST00000568561 WNK2Q9Y3S1 2297 aa13.33□□□□□ -0.28
NME3-211ENST00000568561 LOC102725191A0A1B0GVB3 256 aa13.33□□□□□ -0.28
NME3-211ENST00000568561 B4DSR2 109 aa13.33□□□□□ -0.28
NME3-211ENST00000568561 SLCO1B7G3V0H7 640 aa13.33□□□□□ -0.28
NME3-211ENST00000568561 SAGP10523 405 aaPredicted RBP13.33□□□□□ -0.28
NME3-211ENST00000568561 ETS2P15036 469 aa13.33□□□□□ -0.28
NME3-211ENST00000568561 AQP1P29972 269 aa13.33□□□□□ -0.28
NME3-211ENST00000568561 RGS8P57771 180 aaPredicted RBP13.33□□□□□ -0.28
NME3-211ENST00000568561 NCALDP61601 193 aa13.33□□□□□ -0.28
NME3-211ENST00000568561 PMS2P3Q13401 168 aa13.33□□□□□ -0.28
NME3-211ENST00000568561 RAB39AQ14964 217 aa13.33□□□□□ -0.28
NME3-211ENST00000568561 ALKBH6Q3KRA9 238 aa13.33□□□□□ -0.28
NME3-211ENST00000568561 GKAP1Q5VSY0 366 aaPredicted RBP13.33□□□□□ -0.28
NME3-211ENST00000568561 ULK3Q6PHR2 472 aa13.33□□□□□ -0.28
NME3-211ENST00000568561 DHRS4L2Q6PKH6 230 aa13.33□□□□□ -0.28
NME3-211ENST00000568561 C5orf46Q6UWT4 87 aa13.33□□□□□ -0.28
NME3-211ENST00000568561 C12orf54Q6X4T0 127 aa13.33□□□□□ -0.28
NME3-211ENST00000568561 THSD4Q6ZMP0 1018 aa13.33□□□□□ -0.28
NME3-211ENST00000568561 NET1Q7Z628 596 aaPredicted RBP13.33□□□□□ -0.28
NME3-211ENST00000568561 GOLGA6L1Q8N7Z2 621 aa13.33□□□□□ -0.28
NME3-211ENST00000568561 DNAJA4Q8WW22 397 aaPredicted RBP13.33□□□□□ -0.28
NME3-211ENST00000568561 YIPF5Q969M3 257 aa13.33□□□□□ -0.28
NME3-211ENST00000568561 SLC47A1Q96FL8 570 aa13.33□□□□□ -0.28
NME3-211ENST00000568561 ASPNQ9BXN1 380 aa13.33□□□□□ -0.28
NME3-211ENST00000568561 RAD21L1Q9H4I0 556 aa13.33□□□□□ -0.28
NME3-211ENST00000568561 B3GAT2Q9NPZ5 323 aa13.33□□□□□ -0.28
NME3-211ENST00000568561 HIF1ANQ9NWT6 349 aa13.33□□□□□ -0.28
NME3-211ENST00000568561 TREM2Q9NZC2 230 aa13.33□□□□□ -0.28
NME3-211ENST00000568561 DUSP13Q9UII6 198 aa13.33□□□□□ -0.28
NME3-211ENST00000568561 METRNQ9UJH8 293 aa13.33□□□□□ -0.28
NME3-211ENST00000568561 MGAM2Q2M2H8 2515 aa13.32□□□□□ -0.28
NME3-211ENST00000568561 A0A0B4J2E0 115 aa13.32□□□□□ -0.28
NME3-211ENST00000568561 A0A1B0GX12 115 aa13.32□□□□□ -0.28
NME3-211ENST00000568561 A0A1W2PPW3 197 aa13.32□□□□□ -0.28
NME3-211ENST00000568561 TPST2O60704 377 aa13.32□□□□□ -0.28
NME3-211ENST00000568561 RAB36O95755 333 aa13.32□□□□□ -0.28
NME3-211ENST00000568561 NAT2P11245 290 aa13.32□□□□□ -0.28
NME3-211ENST00000568561 CFPP27918 469 aa13.32□□□□□ -0.28
NME3-211ENST00000568561 GLRXP35754 106 aa13.32□□□□□ -0.28
NME3-211ENST00000568561 RAB1AP62820 205 aa13.32□□□□□ -0.28
NME3-211ENST00000568561 CDK6Q00534 326 aa13.32□□□□□ -0.28
NME3-211ENST00000568561 GALK2Q01415 458 aa13.32□□□□□ -0.28
NME3-211ENST00000568561 PUDPQ08623 228 aa13.32□□□□□ -0.28
NME3-211ENST00000568561 OR1Q1Q15612 314 aa13.32□□□□□ -0.28
NME3-211ENST00000568561 NHLRC1Q6VVB1 395 aa13.32□□□□□ -0.28
NME3-211ENST00000568561 SEMA6DQ8NFY4 1073 aa13.32□□□□□ -0.28
NME3-211ENST00000568561 FGFBP3Q8TAT2 258 aa13.32□□□□□ -0.28
NME3-211ENST00000568561 TMEM186Q96B77 213 aa13.32□□□□□ -0.28
NME3-211ENST00000568561 FOXB1Q99853 325 aa13.32□□□□□ -0.28
NME3-211ENST00000568561 OR51B6Q9H340 312 aa13.32□□□□□ -0.28
NME3-211ENST00000568561 IKZF5Q9H5V7 419 aa13.32□□□□□ -0.28
NME3-211ENST00000568561 ZNF275Q9NSD4 429 aaPredicted RBP13.32□□□□□ -0.28
NME3-211ENST00000568561 SELENONQ9NZV5 590 aa13.32□□□□□ -0.28
NME3-211ENST00000568561 TESQ9UGI8 421 aaKnown RBP13.32□□□□□ -0.28
NME3-211ENST00000568561 SPEF1Q9Y4P9 236 aa13.32□□□□□ -0.28
NME3-211ENST00000568561 CORINQ9Y5Q5 1042 aa13.32□□□□□ -0.28
NME3-211ENST00000568561 ZNF726A6NNF4 738 aa13.31□□□□□ -0.28
NME3-211ENST00000568561 C11orf98E9PRG8 122 aa13.31□□□□□ -0.28
NME3-211ENST00000568561 PPIHO43447 177 aaKnown RBP13.31□□□□□ -0.28
NME3-211ENST00000568561 PCMT1P22061 227 aa13.31□□□□□ -0.28
NME3-211ENST00000568561 ACHEP22303 614 aa13.31□□□□□ -0.28
NME3-211ENST00000568561 AHCYP23526 432 aa13.31□□□□□ -0.28
NME3-211ENST00000568561 CSNK1A1P48729 337 aa13.31□□□□□ -0.28
NME3-211ENST00000568561 EVX1P49640 407 aa13.31□□□□□ -0.28
NME3-211ENST00000568561 CDH12P55289 794 aa13.31□□□□□ -0.28
NME3-211ENST00000568561 BIDP55957 195 aa13.31□□□□□ -0.28
NME3-211ENST00000568561 RUNX1T1Q06455 604 aa13.31□□□□□ -0.28
NME3-211ENST00000568561 FXNQ16595 210 aa13.31□□□□□ -0.28
NME3-211ENST00000568561 FAM91A1Q658Y4 838 aa13.31□□□□□ -0.28
NME3-211ENST00000568561 REEP3Q6NUK4 255 aa13.31□□□□□ -0.28
NME3-211ENST00000568561 SHQ1Q6PI26 577 aaKnown RBP13.31□□□□□ -0.28
NME3-211ENST00000568561 ZNF584Q8IVC4 421 aa13.31□□□□□ -0.28
NME3-211ENST00000568561 SCAIQ8N9R8 606 aa13.31□□□□□ -0.28
NME3-211ENST00000568561 RDH5Q92781 318 aa13.31□□□□□ -0.28
NME3-211ENST00000568561 LRR1Q96L50 414 aa13.31□□□□□ -0.28
NME3-211ENST00000568561 LRRC37BQ96QE4 947 aa13.31□□□□□ -0.28
NME3-211ENST00000568561 EPYCQ99645 322 aa13.31□□□□□ -0.28
NME3-211ENST00000568561 PLA2G12AQ9BZM1 189 aa13.31□□□□□ -0.28
NME3-211ENST00000568561 RACGAP1Q9H0H5 632 aa13.31□□□□□ -0.28
NME3-211ENST00000568561 MS4A5Q9H3V2 200 aa13.31□□□□□ -0.28
NME3-211ENST00000568561 TMEM27Q9HBJ8 222 aa13.31□□□□□ -0.28
NME3-211ENST00000568561 M0R3H8 397 aa13.3□□□□□ -0.28
NME3-211ENST00000568561 PLPP3O14495 311 aa13.3□□□□□ -0.28
NME3-211ENST00000568561 MSMBP08118 114 aa13.3□□□□□ -0.28
NME3-211ENST00000568561 FAM157BP0CG42 384 aa13.3□□□□□ -0.28
NME3-211ENST00000568561 ADORA3P0DMS8 318 aa13.3□□□□□ -0.28
NME3-211ENST00000568561 MAGEB1P43366 347 aa13.3□□□□□ -0.28
NME3-211ENST00000568561 RPS23P62266 143 aaKnown RBP13.3□□□□□ -0.28
NME3-211ENST00000568561 SCARB2Q14108 478 aa13.3□□□□□ -0.28
NME3-211ENST00000568561 PAGE3Q5JUK9 113 aa13.3□□□□□ -0.28
NME3-211ENST00000568561 LRIF1Q5T3J3 769 aa13.3□□□□□ -0.28
NME3-211ENST00000568561 UGT2A3Q6UWM9 527 aa13.3□□□□□ -0.28
NME3-211ENST00000568561 WDR88Q6ZMY6 472 aa13.3□□□□□ -0.28
NME3-211ENST00000568561 DEF8Q6ZN54 512 aa13.3□□□□□ -0.28
NME3-211ENST00000568561 ZNF627Q7L945 461 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms