RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 RNF114Q9Y508 228 aa8.34□□□□□ -1.07
CAPN3-216ENST00000567071 KCNE3Q9Y6H6 103 aa8.34□□□□□ -1.07
CAPN3-216ENST00000567071 RYR2Q92736 4967 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 IGLV3-32A0A0A0MS00 114 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 GXYLT2A0PJZ3 443 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 ELOVL7A1L3X0 281 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 PRAMEF27A3QJZ7 478 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 FAM181BA6NEQ2 426 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 ZNF724A8MTY0 619 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 C5orf58C9J3I9 102 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 CXCR6O00574 342 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 NDUFA7O95182 113 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 ANGPTL1O95841 491 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 IGHV3-9P01782 118 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 OPN1MWP04001 364 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 ADRA2AP08913 450 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 OPN1MW2P0DN77 364 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 OPN1MW3P0DN78 364 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 NR2F1P10589 423 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 BMP2P12643 396 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 NPR2P20594 1047 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 ENPP1P22413 925 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 GABRA3P34903 492 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 ANXA11P50995 505 aaKnown RBP8.33□□□□□ -1.08
CAPN3-216ENST00000567071 PSMD4P55036 377 aaKnown RBP8.33□□□□□ -1.08
CAPN3-216ENST00000567071 CDK6Q00534 326 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 MS4A2Q01362 244 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 BNIP2Q12982 314 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 SCARB2Q14108 478 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 FLOT2Q14254 428 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 SYPL1Q16563 259 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 DECR1Q16698 335 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 CYP27C1Q4G0S4 372 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 GPAT3Q53EU6 434 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 EXOSC6Q5RKV6 272 aaKnown RBP8.33□□□□□ -1.08
CAPN3-216ENST00000567071 CCNJQ5T5M9 372 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 ATAD3BQ5T9A4 648 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 ERICH5Q6P6B1 374 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 CYP2R1Q6VVX0 501 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 HMGN2P46Q86SG4 172 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 CARM1Q86X55 608 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 HIPK4Q8NE63 616 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 OR4F15Q8NGB8 312 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 OR4N2Q8NGD1 307 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 SLC38A5Q8WUX1 472 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 APH1AQ96BI3 265 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 TMEM19Q96HH6 336 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 ARL5BQ96KC2 179 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 OCSTAMPQ9BR26 566 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 LMF2Q9BU23 707 aaKnown RBP8.33□□□□□ -1.08
CAPN3-216ENST00000567071 KATNB1Q9BVA0 655 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 TPK1Q9H3S4 243 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 PIGUQ9H490 435 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 TMEM38AQ9H6F2 299 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 A4GALTQ9NPC4 353 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 SLC17A5Q9NRA2 495 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 POMPQ9Y244 141 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 RRP15Q9Y3B9 282 aaKnown RBP8.33□□□□□ -1.08
CAPN3-216ENST00000567071 SNX13Q9Y5W8 968 aa8.33□□□□□ -1.08
CAPN3-216ENST00000567071 TET2Q6N021 2002 aaPredicted RBP8.32□□□□□ -1.08
CAPN3-216ENST00000567071 IGHV3-15A0A0B4J1V0 119 aa8.32□□□□□ -1.08
CAPN3-216ENST00000567071 TMEM247A6NEH6 219 aa8.32□□□□□ -1.08
CAPN3-216ENST00000567071 WNT9BO14905 357 aa8.32□□□□□ -1.08
CAPN3-216ENST00000567071 NKX2-2O95096 273 aa8.32□□□□□ -1.08
CAPN3-216ENST00000567071 CHRM4P08173 479 aa8.32□□□□□ -1.08
CAPN3-216ENST00000567071 ELK4P28324 431 aa8.32□□□□□ -1.08
CAPN3-216ENST00000567071 SLC7A1P30825 629 aa8.32□□□□□ -1.08
CAPN3-216ENST00000567071 MAP3K8P41279 467 aa8.32□□□□□ -1.08
CAPN3-216ENST00000567071 EIF1P41567 113 aaKnown RBP8.32□□□□□ -1.08
CAPN3-216ENST00000567071 MAGEA8P43361 318 aa8.32□□□□□ -1.08
CAPN3-216ENST00000567071 POU6F2P78424 691 aaPredicted RBP8.32□□□□□ -1.08
CAPN3-216ENST00000567071 HPCAP84074 193 aa8.32□□□□□ -1.08
CAPN3-216ENST00000567071 PSG6Q00889 435 aa8.32□□□□□ -1.08
CAPN3-216ENST00000567071 TRIM25Q14258 630 aaKnown RBP8.32□□□□□ -1.08
CAPN3-216ENST00000567071 MAPK11Q15759 364 aa8.32□□□□□ -1.08
CAPN3-216ENST00000567071 TUSC1Q2TAM9 212 aa8.32□□□□□ -1.08
CAPN3-216ENST00000567071 PLPPR5Q32ZL2 321 aa8.32□□□□□ -1.08
CAPN3-216ENST00000567071 SPATS1Q496A3 300 aa8.32□□□□□ -1.08
CAPN3-216ENST00000567071 LRRC23Q53EV4 343 aaPredicted RBP8.32□□□□□ -1.08
CAPN3-216ENST00000567071 ZCCHC12Q6PEW1 402 aa8.32□□□□□ -1.08
CAPN3-216ENST00000567071 DHFR2Q86XF0 187 aa8.32□□□□□ -1.08
CAPN3-216ENST00000567071 ADGRG3Q86Y34 549 aa8.32□□□□□ -1.08
CAPN3-216ENST00000567071 WDR31Q8NA23 367 aa8.32□□□□□ -1.08
CAPN3-216ENST00000567071 C1orf162Q8NEQ5 155 aaPredicted RBP8.32□□□□□ -1.08
CAPN3-216ENST00000567071 BHLHE22Q8NFJ8 381 aaPredicted RBP8.32□□□□□ -1.08
CAPN3-216ENST00000567071 HOXB13Q92826 284 aaPredicted RBP8.32□□□□□ -1.08
CAPN3-216ENST00000567071 FAM162AQ96A26 154 aa8.32□□□□□ -1.08
CAPN3-216ENST00000567071 ASB9Q96DX5 294 aa8.32□□□□□ -1.08
CAPN3-216ENST00000567071 ZNF48Q96MX3 618 aaPredicted RBP8.32□□□□□ -1.08
CAPN3-216ENST00000567071 STACQ99469 402 aa8.32□□□□□ -1.08
CAPN3-216ENST00000567071 DOK1Q99704 481 aa8.32□□□□□ -1.08
CAPN3-216ENST00000567071 BTBD2Q9BX70 525 aa8.32□□□□□ -1.08
CAPN3-216ENST00000567071 ZNF275Q9NSD4 429 aaPredicted RBP8.32□□□□□ -1.08
CAPN3-216ENST00000567071 MED17Q9NVC6 651 aa8.32□□□□□ -1.08
CAPN3-216ENST00000567071 EXD2Q9NVH0 621 aa8.32□□□□□ -1.08
CAPN3-216ENST00000567071 ASH2LQ9UBL3 628 aa8.32□□□□□ -1.08
CAPN3-216ENST00000567071 OPN4Q9UHM6 478 aa8.32□□□□□ -1.08
CAPN3-216ENST00000567071 MAGEL2Q9UJ55 1249 aa8.32□□□□□ -1.08
CAPN3-216ENST00000567071 ANGPT4Q9Y264 503 aa8.32□□□□□ -1.08
CAPN3-216ENST00000567071 NOSIPQ9Y314 301 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms