RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 CLEC4AQ9UMR7 237 aa13.15□□□□□ -0.3
SPG7-213ENST00000566221 NOSIPQ9Y314 301 aaKnown RBP13.15□□□□□ -0.3
SPG7-213ENST00000566221 A0A1B0GUH1 482 aa13.14□□□□□ -0.31
SPG7-213ENST00000566221 CCL21O00585 134 aa13.14□□□□□ -0.31
SPG7-213ENST00000566221 BHLHE40O14503 412 aa13.14□□□□□ -0.31
SPG7-213ENST00000566221 ARPC3O15145 178 aa13.14□□□□□ -0.31
SPG7-213ENST00000566221 SLC16A6O15403 523 aa13.14□□□□□ -0.31
SPG7-213ENST00000566221 IDH3BO43837 385 aa13.14□□□□□ -0.31
SPG7-213ENST00000566221 TOXO94900 526 aa13.14□□□□□ -0.31
SPG7-213ENST00000566221 BCL10O95999 233 aa13.14□□□□□ -0.31
SPG7-213ENST00000566221 IGFBP1P08833 259 aaPredicted RBP13.14□□□□□ -0.31
SPG7-213ENST00000566221 SDHAP31040 664 aa13.14□□□□□ -0.31
SPG7-213ENST00000566221 CAPGP40121 348 aa13.14□□□□□ -0.31
SPG7-213ENST00000566221 SMSP52788 366 aa13.14□□□□□ -0.31
SPG7-213ENST00000566221 CLDN17P56750 224 aa13.14□□□□□ -0.31
SPG7-213ENST00000566221 RPL27P61353 136 aaKnown RBP13.14□□□□□ -0.31
SPG7-213ENST00000566221 ERVK-25P63136 954 aa13.14□□□□□ -0.31
SPG7-213ENST00000566221 PMPCAQ10713 525 aa13.14□□□□□ -0.31
SPG7-213ENST00000566221 NPRL3Q12980 569 aa13.14□□□□□ -0.31
SPG7-213ENST00000566221 MED21Q13503 144 aa13.14□□□□□ -0.31
SPG7-213ENST00000566221 PGGHGQ32M88 737 aa13.14□□□□□ -0.31
SPG7-213ENST00000566221 SLC27A4Q6P1M0 643 aa13.14□□□□□ -0.31
SPG7-213ENST00000566221 MTFR2Q6P444 385 aa13.14□□□□□ -0.31
SPG7-213ENST00000566221 NHLRC1Q6VVB1 395 aa13.14□□□□□ -0.31
SPG7-213ENST00000566221 FAM214BQ7L5A3 538 aa13.14□□□□□ -0.31
SPG7-213ENST00000566221 FAM122BQ7Z309 247 aa13.14□□□□□ -0.31
SPG7-213ENST00000566221 LNX2Q8N448 690 aa13.14□□□□□ -0.31
SPG7-213ENST00000566221 ZIC4Q8N9L1 334 aa13.14□□□□□ -0.31
SPG7-213ENST00000566221 OR6K3Q8NGY3 331 aa13.14□□□□□ -0.31
SPG7-213ENST00000566221 ASB10Q8WXI3 467 aa13.14□□□□□ -0.31
SPG7-213ENST00000566221 ERMAPQ96PL5 475 aaPredicted RBP13.14□□□□□ -0.31
SPG7-213ENST00000566221 ZNF385AQ96PM9 386 aaKnown RBP13.14□□□□□ -0.31
SPG7-213ENST00000566221 TSPAN32Q96QS1 320 aa13.14□□□□□ -0.31
SPG7-213ENST00000566221 SFXN3Q9BWM7 321 aa13.14□□□□□ -0.31
SPG7-213ENST00000566221 TEX12Q9BXU0 123 aa13.14□□□□□ -0.31
SPG7-213ENST00000566221 TOR3AQ9H497 397 aa13.14□□□□□ -0.31
SPG7-213ENST00000566221 PARPBPQ9NWS1 579 aa13.14□□□□□ -0.31
SPG7-213ENST00000566221 MED29Q9NX70 200 aa13.14□□□□□ -0.31
SPG7-213ENST00000566221 GRHPRQ9UBQ7 328 aa13.14□□□□□ -0.31
SPG7-213ENST00000566221 ADAM18Q9Y3Q7 739 aa13.14□□□□□ -0.31
SPG7-213ENST00000566221 CACNA1CQ13936 2221 aa13.13□□□□□ -0.31
SPG7-213ENST00000566221 A6NIZ1 184 aa13.13□□□□□ -0.31
SPG7-213ENST00000566221 HSPB2A8KAH6 182 aa13.13□□□□□ -0.31
SPG7-213ENST00000566221 IMPA2O14732 288 aa13.13□□□□□ -0.31
SPG7-213ENST00000566221 SNAP29O95721 258 aa13.13□□□□□ -0.31
SPG7-213ENST00000566221 TXNDC12O95881 172 aa13.13□□□□□ -0.31
SPG7-213ENST00000566221 NOS3P29474 1203 aa13.13□□□□□ -0.31
SPG7-213ENST00000566221 GRK5P34947 590 aa13.13□□□□□ -0.31
SPG7-213ENST00000566221 BIDP55957 195 aa13.13□□□□□ -0.31
SPG7-213ENST00000566221 RAP1BP61224 184 aa13.13□□□□□ -0.31
SPG7-213ENST00000566221 RAP1AP62834 184 aa13.13□□□□□ -0.31
SPG7-213ENST00000566221 SIRPAP78324 504 aa13.13□□□□□ -0.31
SPG7-213ENST00000566221 ADARB1P78563 741 aaKnown RBP13.13□□□□□ -0.31
SPG7-213ENST00000566221 CDK5Q00535 292 aa13.13□□□□□ -0.31
SPG7-213ENST00000566221 KRR1Q13601 381 aaKnown RBP13.13□□□□□ -0.31
SPG7-213ENST00000566221 MELKQ14680 651 aa13.13□□□□□ -0.31
SPG7-213ENST00000566221 PTGES3Q15185 160 aaKnown RBP13.13□□□□□ -0.31
SPG7-213ENST00000566221 HSPB2Q16082 182 aa13.13□□□□□ -0.31
SPG7-213ENST00000566221 C4orf17Q53FE4 359 aa13.13□□□□□ -0.31
SPG7-213ENST00000566221 CASP12Q6UXS9 341 aa13.13□□□□□ -0.31
SPG7-213ENST00000566221 AAED1Q7RTV5 226 aa13.13□□□□□ -0.31
SPG7-213ENST00000566221 IQCF1Q8N6M8 205 aa13.13□□□□□ -0.31
SPG7-213ENST00000566221 ARIH2OSQ8N7S6 290 aa13.13□□□□□ -0.31
SPG7-213ENST00000566221 CNEP1R1Q8N9A8 125 aa13.13□□□□□ -0.31
SPG7-213ENST00000566221 NAXEQ8NCW5 288 aa13.13□□□□□ -0.31
SPG7-213ENST00000566221 OR6X1Q8NH79 312 aa13.13□□□□□ -0.31
SPG7-213ENST00000566221 PRR7Q8TB68 274 aa13.13□□□□□ -0.31
SPG7-213ENST00000566221 ZNF519Q8TB69 540 aa13.13□□□□□ -0.31
SPG7-213ENST00000566221 RND1Q92730 232 aa13.13□□□□□ -0.31
SPG7-213ENST00000566221 MBOAT4Q96T53 435 aa13.13□□□□□ -0.31
SPG7-213ENST00000566221 ANKRD60Q9BZ19 345 aa13.13□□□□□ -0.31
SPG7-213ENST00000566221 PRRG3Q9BZD7 231 aa13.13□□□□□ -0.31
SPG7-213ENST00000566221 FAM118AQ9NWS6 357 aa13.13□□□□□ -0.31
SPG7-213ENST00000566221 IER3IP1Q9Y5U9 82 aa13.13□□□□□ -0.31
SPG7-213ENST00000566221 TEX13CA0A0J9YWL9 993 aa13.12□□□□□ -0.31
SPG7-213ENST00000566221 SLC35F4A4IF30 521 aa13.12□□□□□ -0.31
SPG7-213ENST00000566221 ZNF726A6NNF4 738 aa13.12□□□□□ -0.31
SPG7-213ENST00000566221 ZAR1LA6NP61 321 aa13.12□□□□□ -0.31
SPG7-213ENST00000566221 CENPBD1B2RD01 187 aa13.12□□□□□ -0.31
SPG7-213ENST00000566221 XKRYO14609 159 aa13.12□□□□□ -0.31
SPG7-213ENST00000566221 SLC43A1O75387 559 aa13.12□□□□□ -0.31
SPG7-213ENST00000566221 MRPL33O75394 65 aaKnown RBP13.12□□□□□ -0.31
SPG7-213ENST00000566221 TNFSF13O75888 250 aa13.12□□□□□ -0.31
SPG7-213ENST00000566221 IGHG1P01857 330 aa13.12□□□□□ -0.31
SPG7-213ENST00000566221 CTSSP25774 331 aa13.12□□□□□ -0.31
SPG7-213ENST00000566221 ACVR1BP36896 505 aa13.12□□□□□ -0.31
SPG7-213ENST00000566221 KIR2DL2P43627 348 aaPredicted RBP13.12□□□□□ -0.31
SPG7-213ENST00000566221 GIPRP48546 466 aa13.12□□□□□ -0.31
SPG7-213ENST00000566221 MYBPC1Q00872 1141 aa13.12□□□□□ -0.31
SPG7-213ENST00000566221 FOXF2Q12947 444 aa13.12□□□□□ -0.31
SPG7-213ENST00000566221 KEAP1Q14145 624 aa13.12□□□□□ -0.31
SPG7-213ENST00000566221 GINS1Q14691 196 aa13.12□□□□□ -0.31
SPG7-213ENST00000566221 ZIK1Q3SY52 487 aaPredicted RBP13.12□□□□□ -0.31
SPG7-213ENST00000566221 ARMC4Q5T2S8 1044 aa13.12□□□□□ -0.31
SPG7-213ENST00000566221 NIPAL3Q6P499 406 aa13.12□□□□□ -0.31
SPG7-213ENST00000566221 ADCK1Q86TW2 530 aa13.12□□□□□ -0.31
SPG7-213ENST00000566221 FJX1Q86VR8 437 aa13.12□□□□□ -0.31
SPG7-213ENST00000566221 NOXO1Q8NFA2 376 aa13.12□□□□□ -0.31
SPG7-213ENST00000566221 OR4Q3Q8NH05 313 aa13.12□□□□□ -0.31
SPG7-213ENST00000566221 ZNF775Q96BV0 537 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms