RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 UPK3AO75631 287 aa18.52■□□□□ 0.56
SHCBP1-205ENST00000566016 SERPINI2O75830 405 aa18.52■□□□□ 0.56
SHCBP1-205ENST00000566016 FOXG1P55316 489 aaPredicted RBP18.52■□□□□ 0.56
SHCBP1-205ENST00000566016 BIDP55957 195 aa18.52■□□□□ 0.56
SHCBP1-205ENST00000566016 TAF11Q15544 211 aa18.52■□□□□ 0.56
SHCBP1-205ENST00000566016 TAB1Q15750 504 aa18.52■□□□□ 0.56
SHCBP1-205ENST00000566016 GABRA6Q16445 453 aa18.52■□□□□ 0.56
SHCBP1-205ENST00000566016 ALG10Q5BKT4 473 aa18.52■□□□□ 0.56
SHCBP1-205ENST00000566016 OR2T5Q6IEZ7 315 aa18.52■□□□□ 0.56
SHCBP1-205ENST00000566016 GPR137CQ8N3F9 429 aa18.52■□□□□ 0.56
SHCBP1-205ENST00000566016 LINC00471Q8N535 108 aa18.52■□□□□ 0.56
SHCBP1-205ENST00000566016 OR13C2Q8NGS9 318 aa18.52■□□□□ 0.56
SHCBP1-205ENST00000566016 OR2T29Q8NH02 315 aa18.52■□□□□ 0.56
SHCBP1-205ENST00000566016 MOSPD2Q8NHP6 518 aa18.52■□□□□ 0.56
SHCBP1-205ENST00000566016 CANT1Q8WVQ1 401 aa18.52■□□□□ 0.56
SHCBP1-205ENST00000566016 SLC25A44Q96H78 314 aaPredicted RBP18.52■□□□□ 0.56
SHCBP1-205ENST00000566016 FAM46AQ96IP4 442 aaKnown RBP18.52■□□□□ 0.56
SHCBP1-205ENST00000566016 EMC6Q9BV81 110 aa18.52■□□□□ 0.56
SHCBP1-205ENST00000566016 RASSF1Q9NS23 344 aa18.52■□□□□ 0.56
SHCBP1-205ENST00000566016 STX18Q9P2W9 335 aaKnown RBP18.52■□□□□ 0.56
SHCBP1-205ENST00000566016 TMCC3Q9ULS5 477 aa18.52■□□□□ 0.56
SHCBP1-205ENST00000566016 CIB4A0PJX0 185 aa18.52■□□□□ 0.55
SHCBP1-205ENST00000566016 RAD51DO75771 328 aa18.52■□□□□ 0.55
SHCBP1-205ENST00000566016 BCL10O95999 233 aa18.52■□□□□ 0.55
SHCBP1-205ENST00000566016 IGHMP01871 453 aa18.52■□□□□ 0.55
SHCBP1-205ENST00000566016 F13BP05160 661 aa18.52■□□□□ 0.55
SHCBP1-205ENST00000566016 IFNGR2P38484 337 aa18.52■□□□□ 0.55
SHCBP1-205ENST00000566016 ROR2Q01974 943 aaKnown RBP18.52■□□□□ 0.55
SHCBP1-205ENST00000566016 LGALS3BPQ08380 585 aa18.52■□□□□ 0.55
SHCBP1-205ENST00000566016 STK11Q15831 433 aa18.52■□□□□ 0.55
SHCBP1-205ENST00000566016 LINGO2Q7L985 606 aa18.52■□□□□ 0.55
SHCBP1-205ENST00000566016 SPATA24Q86W54 205 aa18.52■□□□□ 0.55
SHCBP1-205ENST00000566016 CHID1Q9BWS9 393 aa18.52■□□□□ 0.55
SHCBP1-205ENST00000566016 PLCE1Q9P212 2302 aa18.52■□□□□ 0.55
SHCBP1-205ENST00000566016 AURKCQ9UQB9 309 aa18.52■□□□□ 0.55
SHCBP1-205ENST00000566016 TRAV27A0A087WT01 109 aa18.51■□□□□ 0.55
SHCBP1-205ENST00000566016 DEFB108AA8MXU0 73 aa18.51■□□□□ 0.55
SHCBP1-205ENST00000566016 LAPTM4AQ15012 233 aa18.51■□□□□ 0.55
SHCBP1-205ENST00000566016 ZBED5Q49AG3 693 aa18.51■□□□□ 0.55
SHCBP1-205ENST00000566016 HMBOX1Q6NT76 420 aa18.51■□□□□ 0.55
SHCBP1-205ENST00000566016 MEX3DQ86XN8 651 aaKnown RBP18.51■□□□□ 0.55
SHCBP1-205ENST00000566016 LRRC75AQ8NAA5 344 aa18.51■□□□□ 0.55
SHCBP1-205ENST00000566016 OR4C15Q8NGM1 316 aa18.51■□□□□ 0.55
SHCBP1-205ENST00000566016 OR51A7Q8NH64 312 aa18.51■□□□□ 0.55
SHCBP1-205ENST00000566016 ZNF566Q969W8 418 aa18.51■□□□□ 0.55
SHCBP1-205ENST00000566016 ZC3HAV1LQ96H79 300 aaKnown RBP18.51■□□□□ 0.55
SHCBP1-205ENST00000566016 NDEL1Q9GZM8 345 aa18.51■□□□□ 0.55
SHCBP1-205ENST00000566016 TXNIPQ9H3M7 391 aa18.51■□□□□ 0.55
SHCBP1-205ENST00000566016 NGBQ9NPG2 151 aa18.51■□□□□ 0.55
SHCBP1-205ENST00000566016 B3GAT2Q9NPZ5 323 aa18.51■□□□□ 0.55
SHCBP1-205ENST00000566016 SIGLEC7Q9Y286 467 aa18.51■□□□□ 0.55
SHCBP1-205ENST00000566016 TNFRSF11BO00300 401 aa18.5■□□□□ 0.55
SHCBP1-205ENST00000566016 IGHG1P01857 330 aa18.5■□□□□ 0.55
SHCBP1-205ENST00000566016 HRGP04196 525 aa18.5■□□□□ 0.55
SHCBP1-205ENST00000566016 FPR3P25089 353 aa18.5■□□□□ 0.55
SHCBP1-205ENST00000566016 CAMK2DQ13557 499 aa18.5■□□□□ 0.55
SHCBP1-205ENST00000566016 ACKR1Q16570 336 aa18.5■□□□□ 0.55
SHCBP1-205ENST00000566016 BEX5Q5H9J7 111 aa18.5■□□□□ 0.55
SHCBP1-205ENST00000566016 ARMC4Q5T2S8 1044 aa18.5■□□□□ 0.55
SHCBP1-205ENST00000566016 FAM205BPQ63HN1 556 aa18.5■□□□□ 0.55
SHCBP1-205ENST00000566016 SEZ6L2Q6UXD5 910 aa18.5■□□□□ 0.55
SHCBP1-205ENST00000566016 ZER1Q7Z7L7 766 aa18.5■□□□□ 0.55
SHCBP1-205ENST00000566016 WDFY1Q8IWB7 410 aa18.5■□□□□ 0.55
SHCBP1-205ENST00000566016 PAPD5Q8NDF8 572 aaKnown RBP18.5■□□□□ 0.55
SHCBP1-205ENST00000566016 ASB10Q8WXI3 467 aa18.5■□□□□ 0.55
SHCBP1-205ENST00000566016 MUCL1Q96DR8 90 aa18.5■□□□□ 0.55
SHCBP1-205ENST00000566016 YY1AP1Q9H869 796 aa18.5■□□□□ 0.55
SHCBP1-205ENST00000566016 REEP1Q9H902 201 aa18.5■□□□□ 0.55
SHCBP1-205ENST00000566016 CRLF2Q9HC73 371 aa18.5■□□□□ 0.55
SHCBP1-205ENST00000566016 GPR35Q9HC97 309 aa18.5■□□□□ 0.55
SHCBP1-205ENST00000566016 CSMD2Q7Z408 3487 aa18.49■□□□□ 0.55
SHCBP1-205ENST00000566016 MCIDASD6RGH6 385 aa18.49■□□□□ 0.55
SHCBP1-205ENST00000566016 SIAH2O43255 324 aa18.49■□□□□ 0.55
SHCBP1-205ENST00000566016 OR10H3O60404 316 aa18.49■□□□□ 0.55
SHCBP1-205ENST00000566016 PGA4P0DJD7 388 aa18.49■□□□□ 0.55
SHCBP1-205ENST00000566016 PGA3P0DJD8 388 aa18.49■□□□□ 0.55
SHCBP1-205ENST00000566016 CSNK1A1P48729 337 aa18.49■□□□□ 0.55
SHCBP1-205ENST00000566016 MELKQ14680 651 aa18.49■□□□□ 0.55
SHCBP1-205ENST00000566016 PPA1Q15181 289 aa18.49■□□□□ 0.55
SHCBP1-205ENST00000566016 C9orf135Q5VTT2 229 aa18.49■□□□□ 0.55
SHCBP1-205ENST00000566016 C1orf94Q6P1W5 598 aa18.49■□□□□ 0.55
SHCBP1-205ENST00000566016 TMEM200AQ86VY9 491 aa18.49■□□□□ 0.55
SHCBP1-205ENST00000566016 OR1K1Q8NGR3 316 aa18.49■□□□□ 0.55
SHCBP1-205ENST00000566016 OR6N1Q8NGY5 312 aa18.49■□□□□ 0.55
SHCBP1-205ENST00000566016 MAGEE2Q8TD90 523 aaPredicted RBP18.49■□□□□ 0.55
SHCBP1-205ENST00000566016 TMEM54Q969K7 222 aa18.49■□□□□ 0.55
SHCBP1-205ENST00000566016 RSRC1Q96IZ7 334 aaKnown RBP18.49■□□□□ 0.55
SHCBP1-205ENST00000566016 TNFRSF13CQ96RJ3 184 aa18.49■□□□□ 0.55
SHCBP1-205ENST00000566016 GPX7Q96SL4 187 aaPredicted RBP18.49■□□□□ 0.55
SHCBP1-205ENST00000566016 MRPL13Q9BYD1 178 aaKnown RBP18.49■□□□□ 0.55
SHCBP1-205ENST00000566016 CLEC4MQ9H2X3 399 aaPredicted RBP18.49■□□□□ 0.55
SHCBP1-205ENST00000566016 OBP2BQ9NPH6 170 aa18.49■□□□□ 0.55
SHCBP1-205ENST00000566016 CCM2LQ9NUG4 571 aaPredicted RBP18.49■□□□□ 0.55
SHCBP1-205ENST00000566016 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.49■□□□□ 0.55
SHCBP1-205ENST00000566016 HEATR1Q9H583 2144 aaKnown RBP18.48■□□□□ 0.55
SHCBP1-205ENST00000566016 PDZD2O15018 2839 aa18.48■□□□□ 0.55
SHCBP1-205ENST00000566016 ZNF99A8MXY4 864 aaPredicted RBP18.48■□□□□ 0.55
SHCBP1-205ENST00000566016 M0R3G1 203 aa18.48■□□□□ 0.55
SHCBP1-205ENST00000566016 PTP4A3O75365 173 aa18.48■□□□□ 0.55
SHCBP1-205ENST00000566016 HOXC12P31275 282 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms