RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 ARF1P84077 181 aaKnown RBP11.72□□□□□ -0.53
CLK3-213ENST00000563842 LGALS3BPQ08380 585 aa11.72□□□□□ -0.53
CLK3-213ENST00000563842 CAMK2DQ13557 499 aa11.72□□□□□ -0.53
CLK3-213ENST00000563842 C3orf36Q3SXR2 165 aa11.72□□□□□ -0.53
CLK3-213ENST00000563842 HIKESHIQ53FT3 197 aa11.72□□□□□ -0.53
CLK3-213ENST00000563842 CARD17Q5XLA6 110 aa11.72□□□□□ -0.53
CLK3-213ENST00000563842 SLC22A25Q6T423 547 aa11.72□□□□□ -0.53
CLK3-213ENST00000563842 NHLRC1Q6VVB1 395 aa11.72□□□□□ -0.53
CLK3-213ENST00000563842 LINGO2Q7L985 606 aa11.72□□□□□ -0.53
CLK3-213ENST00000563842 TGIF2LYQ8IUE0 185 aa11.72□□□□□ -0.53
CLK3-213ENST00000563842 LRRC17Q8N6Y2 441 aa11.72□□□□□ -0.53
CLK3-213ENST00000563842 KBTBD8Q8NFY9 601 aa11.72□□□□□ -0.53
CLK3-213ENST00000563842 PFN4Q8NHR9 129 aa11.72□□□□□ -0.53
CLK3-213ENST00000563842 SMAP2Q8WU79 429 aaPredicted RBP11.72□□□□□ -0.53
CLK3-213ENST00000563842 NSL1Q96IY1 281 aa11.72□□□□□ -0.53
CLK3-213ENST00000563842 TXNDC15Q96J42 360 aa11.72□□□□□ -0.53
CLK3-213ENST00000563842 CDRT15Q96T59 188 aa11.72□□□□□ -0.53
CLK3-213ENST00000563842 KCNS3Q9BQ31 491 aa11.72□□□□□ -0.53
CLK3-213ENST00000563842 C1QTNF6Q9BXI9 259 aa11.72□□□□□ -0.53
CLK3-213ENST00000563842 ULBP2Q9BZM5 246 aa11.72□□□□□ -0.53
CLK3-213ENST00000563842 ANKRD19PQ9H560 264 aa11.72□□□□□ -0.53
CLK3-213ENST00000563842 DCAF13Q9NV06 445 aaKnown RBP11.72□□□□□ -0.53
CLK3-213ENST00000563842 CISD1Q9NZ45 108 aaKnown RBP11.72□□□□□ -0.53
CLK3-213ENST00000563842 POFUT2Q9Y2G5 429 aa11.72□□□□□ -0.53
CLK3-213ENST00000563842 ENPP4Q9Y6X5 453 aa11.72□□□□□ -0.53
CLK3-213ENST00000563842 ABCA2Q9BZC7 2435 aa11.72□□□□□ -0.53
CLK3-213ENST00000563842 SHISA9B4DS77 424 aa11.71□□□□□ -0.53
CLK3-213ENST00000563842 MCIDASD6RGH6 385 aa11.71□□□□□ -0.53
CLK3-213ENST00000563842 IFI30P13284 250 aa11.71□□□□□ -0.53
CLK3-213ENST00000563842 ITGA2P17301 1181 aa11.71□□□□□ -0.53
CLK3-213ENST00000563842 TCN1P20061 433 aaPredicted RBP11.71□□□□□ -0.53
CLK3-213ENST00000563842 YAP1P46937 504 aaKnown RBP11.71□□□□□ -0.53
CLK3-213ENST00000563842 DAP3P51398 398 aaKnown RBP11.71□□□□□ -0.53
CLK3-213ENST00000563842 SLC25A3Q00325 362 aa11.71□□□□□ -0.53
CLK3-213ENST00000563842 FOXD4Q12950 439 aaPredicted RBP11.71□□□□□ -0.53
CLK3-213ENST00000563842 ANKDD1AQ495B1 522 aa11.71□□□□□ -0.53
CLK3-213ENST00000563842 PRSS57Q6UWY2 283 aa11.71□□□□□ -0.53
CLK3-213ENST00000563842 DEFB107AQ8IZN7 70 aa11.71□□□□□ -0.53
CLK3-213ENST00000563842 ARHGAP24Q8N264 748 aa11.71□□□□□ -0.53
CLK3-213ENST00000563842 RNF148Q8N7C7 305 aa11.71□□□□□ -0.53
CLK3-213ENST00000563842 FAM169BQ8N8A8 192 aa11.71□□□□□ -0.53
CLK3-213ENST00000563842 LILRB1Q8NHL6 650 aaPredicted RBP11.71□□□□□ -0.53
CLK3-213ENST00000563842 ACOT11Q8WXI4 607 aaPredicted RBP11.71□□□□□ -0.53
CLK3-213ENST00000563842 ZNF566Q969W8 418 aa11.71□□□□□ -0.53
CLK3-213ENST00000563842 BPIFA2Q96DR5 249 aa11.71□□□□□ -0.53
CLK3-213ENST00000563842 TRMT61AQ96FX7 289 aaKnown RBP11.71□□□□□ -0.53
CLK3-213ENST00000563842 SLC25A44Q96H78 314 aaPredicted RBP11.71□□□□□ -0.53
CLK3-213ENST00000563842 GSX2Q9BZM3 304 aa11.71□□□□□ -0.53
CLK3-213ENST00000563842 GRIP2Q9C0E4 1043 aa11.71□□□□□ -0.53
CLK3-213ENST00000563842 INIPQ9NRY2 104 aa11.71□□□□□ -0.53
CLK3-213ENST00000563842 C20orf141Q9NUB4 165 aa11.71□□□□□ -0.53
CLK3-213ENST00000563842 ADAM21Q9UKJ8 722 aa11.71□□□□□ -0.53
CLK3-213ENST00000563842 LAMP3Q9UQV4 416 aa11.71□□□□□ -0.53
CLK3-213ENST00000563842 CELSR1Q9NYQ6 3014 aa11.71□□□□□ -0.54
CLK3-213ENST00000563842 A0A096LPE4 126 aa11.7□□□□□ -0.54
CLK3-213ENST00000563842 A0A1W2PPZ6 126 aa11.7□□□□□ -0.54
CLK3-213ENST00000563842 NPIPB13A6NJU9 1138 aa11.7□□□□□ -0.54
CLK3-213ENST00000563842 CENPBD1B2RD01 187 aa11.7□□□□□ -0.54
CLK3-213ENST00000563842 NPIPB4C9JG80 1138 aa11.7□□□□□ -0.54
CLK3-213ENST00000563842 IGHG1P01857 330 aa11.7□□□□□ -0.54
CLK3-213ENST00000563842 SAGP10523 405 aaPredicted RBP11.7□□□□□ -0.54
CLK3-213ENST00000563842 NR2C1P13056 603 aa11.7□□□□□ -0.54
CLK3-213ENST00000563842 CD99P14209 185 aa11.7□□□□□ -0.54
CLK3-213ENST00000563842 PAX1P15863 534 aa11.7□□□□□ -0.54
CLK3-213ENST00000563842 RHCEP18577 417 aa11.7□□□□□ -0.54
CLK3-213ENST00000563842 SLC9A3P48764 834 aa11.7□□□□□ -0.54
CLK3-213ENST00000563842 ADAM8P78325 824 aa11.7□□□□□ -0.54
CLK3-213ENST00000563842 RPL18Q07020 188 aaKnown RBP11.7□□□□□ -0.54
CLK3-213ENST00000563842 TAF11Q15544 211 aa11.7□□□□□ -0.54
CLK3-213ENST00000563842 FXNQ16595 210 aa11.7□□□□□ -0.54
CLK3-213ENST00000563842 AGAP6Q5VW22 663 aa11.7□□□□□ -0.54
CLK3-213ENST00000563842 ZNF730Q6ZMV8 503 aa11.7□□□□□ -0.54
CLK3-213ENST00000563842 FITM2Q8N6M3 262 aa11.7□□□□□ -0.54
CLK3-213ENST00000563842 IGFBPL1Q8WX77 278 aa11.7□□□□□ -0.54
CLK3-213ENST00000563842 NANOS1Q8WY41 292 aaKnown RBP11.7□□□□□ -0.54
CLK3-213ENST00000563842 TMEM54Q969K7 222 aa11.7□□□□□ -0.54
CLK3-213ENST00000563842 MCUR1Q96AQ8 359 aa11.7□□□□□ -0.54
CLK3-213ENST00000563842 NSMCE2Q96MF7 247 aa11.7□□□□□ -0.54
CLK3-213ENST00000563842 SLC38A2Q96QD8 506 aa11.7□□□□□ -0.54
CLK3-213ENST00000563842 NDEL1Q9GZM8 345 aa11.7□□□□□ -0.54
CLK3-213ENST00000563842 FAM53CQ9NYF3 392 aa11.7□□□□□ -0.54
CLK3-213ENST00000563842 GLTPQ9NZD2 209 aa11.7□□□□□ -0.54
CLK3-213ENST00000563842 RHCGQ9UBD6 479 aa11.7□□□□□ -0.54
CLK3-213ENST00000563842 CRNNQ9UBG3 495 aaPredicted RBP11.7□□□□□ -0.54
CLK3-213ENST00000563842 CD300AQ9UGN4 299 aa11.7□□□□□ -0.54
CLK3-213ENST00000563842 SNX13Q9Y5W8 968 aa11.7□□□□□ -0.54
CLK3-213ENST00000563842 B2RBV5 119 aa11.69□□□□□ -0.54
CLK3-213ENST00000563842 J3KTA2 159 aa11.69□□□□□ -0.54
CLK3-213ENST00000563842 FFAR1O14842 300 aa11.69□□□□□ -0.54
CLK3-213ENST00000563842 CRYAAP02489 173 aa11.69□□□□□ -0.54
CLK3-213ENST00000563842 H1F0P07305 194 aaKnown RBP11.69□□□□□ -0.54
CLK3-213ENST00000563842 TSPAN19P0C672 248 aa11.69□□□□□ -0.54
CLK3-213ENST00000563842 DANCRP0C864 163 aa11.69□□□□□ -0.54
CLK3-213ENST00000563842 CBR1P16152 277 aa11.69□□□□□ -0.54
CLK3-213ENST00000563842 CALB2P22676 271 aa11.69□□□□□ -0.54
CLK3-213ENST00000563842 ARR3P36575 388 aa11.69□□□□□ -0.54
CLK3-213ENST00000563842 AQP2P41181 271 aa11.69□□□□□ -0.54
CLK3-213ENST00000563842 PTH2RP49190 550 aa11.69□□□□□ -0.54
CLK3-213ENST00000563842 CLRN1P58418 232 aa11.69□□□□□ -0.54
CLK3-213ENST00000563842 SMIM11AP58511 58 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms