RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 TRAPPC2LH3BP13 241 aa8.78□□□□□ -1
SF3B3-204ENST00000563739 M0R082 166 aa8.78□□□□□ -1
SF3B3-204ENST00000563739 SHOX2O60902 331 aaPredicted RBP8.78□□□□□ -1
SF3B3-204ENST00000563739 PATE4P0C8F1 98 aa8.78□□□□□ -1
SF3B3-204ENST00000563739 B4GALT1P15291 398 aa8.78□□□□□ -1
SF3B3-204ENST00000563739 MAKP20794 623 aa8.78□□□□□ -1
SF3B3-204ENST00000563739 CRYBB2P43320 205 aa8.78□□□□□ -1
SF3B3-204ENST00000563739 AQP5P55064 265 aa8.78□□□□□ -1
SF3B3-204ENST00000563739 SEC61A1P61619 476 aaKnown RBP8.78□□□□□ -1
SF3B3-204ENST00000563739 LCN2P80188 198 aa8.78□□□□□ -1
SF3B3-204ENST00000563739 RELBQ01201 579 aa8.78□□□□□ -1
SF3B3-204ENST00000563739 PIGFQ07326 219 aa8.78□□□□□ -1
SF3B3-204ENST00000563739 RAB39AQ14964 217 aa8.78□□□□□ -1
SF3B3-204ENST00000563739 MFSD13AQ14CX5 517 aa8.78□□□□□ -1
SF3B3-204ENST00000563739 SLC9A3R2Q15599 337 aa8.78□□□□□ -1
SF3B3-204ENST00000563739 GSTA3Q16772 222 aa8.78□□□□□ -1
SF3B3-204ENST00000563739 GSG1Q2KHT4 349 aa8.78□□□□□ -1
SF3B3-204ENST00000563739 GPAT3Q53EU6 434 aa8.78□□□□□ -1
SF3B3-204ENST00000563739 SPANXN4Q5MJ08 99 aa8.78□□□□□ -1
SF3B3-204ENST00000563739 LRRC74BQ6ZQY2 392 aa8.78□□□□□ -1
SF3B3-204ENST00000563739 SERPINA11Q86U17 422 aa8.78□□□□□ -1
SF3B3-204ENST00000563739 RNF130Q86XS8 419 aa8.78□□□□□ -1
SF3B3-204ENST00000563739 SYT14Q8NB59 555 aa8.78□□□□□ -1
SF3B3-204ENST00000563739 IL17RDQ8NFM7 739 aa8.78□□□□□ -1
SF3B3-204ENST00000563739 MFSD8Q8NHS3 518 aa8.78□□□□□ -1
SF3B3-204ENST00000563739 ZNF417Q8TAU3 575 aa8.78□□□□□ -1
SF3B3-204ENST00000563739 ZNF587Q96SQ5 575 aaPredicted RBP8.78□□□□□ -1
SF3B3-204ENST00000563739 PKP2Q99959 881 aa8.78□□□□□ -1
SF3B3-204ENST00000563739 C7orf69Q9H7B7 122 aa8.78□□□□□ -1
SF3B3-204ENST00000563739 DDX28Q9NUL7 540 aaKnown RBP8.78□□□□□ -1
SF3B3-204ENST00000563739 MED29Q9NX70 200 aa8.78□□□□□ -1
SF3B3-204ENST00000563739 EPPK1P58107 5090 aaKnown RBP8.77□□□□□ -1.01
SF3B3-204ENST00000563739 COL7A1Q02388 2944 aa8.77□□□□□ -1.01
SF3B3-204ENST00000563739 MDFIC2A0A1B0GVS7 189 aa8.77□□□□□ -1.01
SF3B3-204ENST00000563739 POM121CA8CG34 1229 aa8.77□□□□□ -1.01
SF3B3-204ENST00000563739 MS4A18H0YCH9 400 aa8.77□□□□□ -1.01
SF3B3-204ENST00000563739 CLDN34H7C241 214 aa8.77□□□□□ -1.01
SF3B3-204ENST00000563739 M0R3G1 203 aa8.77□□□□□ -1.01
SF3B3-204ENST00000563739 ITM2AO43736 263 aa8.77□□□□□ -1.01
SF3B3-204ENST00000563739 CPSF4O95639 269 aaKnown RBP8.77□□□□□ -1.01
SF3B3-204ENST00000563739 AGR2O95994 175 aa8.77□□□□□ -1.01
SF3B3-204ENST00000563739 CHEK2O96017 543 aa8.77□□□□□ -1.01
SF3B3-204ENST00000563739 ZNF250P15622 560 aa8.77□□□□□ -1.01
SF3B3-204ENST00000563739 CXCR1P25024 350 aa8.77□□□□□ -1.01
SF3B3-204ENST00000563739 IL12AP29459 219 aa8.77□□□□□ -1.01
SF3B3-204ENST00000563739 GCH1P30793 250 aa8.77□□□□□ -1.01
SF3B3-204ENST00000563739 RPS5P46782 204 aaKnown RBP8.77□□□□□ -1.01
SF3B3-204ENST00000563739 GIPRP48546 466 aa8.77□□□□□ -1.01
SF3B3-204ENST00000563739 ABCE1P61221 599 aaKnown RBP8.77□□□□□ -1.01
SF3B3-204ENST00000563739 IL13RA1P78552 427 aa8.77□□□□□ -1.01
SF3B3-204ENST00000563739 HOXC5Q00444 222 aa8.77□□□□□ -1.01
SF3B3-204ENST00000563739 EMX2Q04743 252 aa8.77□□□□□ -1.01
SF3B3-204ENST00000563739 BST1Q10588 318 aa8.77□□□□□ -1.01
SF3B3-204ENST00000563739 MS4A18Q3C1V0 323 aa8.77□□□□□ -1.01
SF3B3-204ENST00000563739 GLIPR1L2Q4G1C9 344 aa8.77□□□□□ -1.01
SF3B3-204ENST00000563739 ZNF311Q5JNZ3 666 aa8.77□□□□□ -1.01
SF3B3-204ENST00000563739 ATAD3BQ5T9A4 648 aa8.77□□□□□ -1.01
SF3B3-204ENST00000563739 C6orf89Q6UWU4 347 aa8.77□□□□□ -1.01
SF3B3-204ENST00000563739 WDR88Q6ZMY6 472 aa8.77□□□□□ -1.01
SF3B3-204ENST00000563739 ZNF771Q7L3S4 317 aaPredicted RBP8.77□□□□□ -1.01
SF3B3-204ENST00000563739 HOMEZQ8IX15 550 aa8.77□□□□□ -1.01
SF3B3-204ENST00000563739 ZNF781Q8N8C0 355 aa8.77□□□□□ -1.01
SF3B3-204ENST00000563739 STK35Q8TDR2 534 aa8.77□□□□□ -1.01
SF3B3-204ENST00000563739 TAAR8Q969N4 342 aa8.77□□□□□ -1.01
SF3B3-204ENST00000563739 DACT3Q96B18 629 aaPredicted RBP8.77□□□□□ -1.01
SF3B3-204ENST00000563739 TXNDC15Q96J42 360 aa8.77□□□□□ -1.01
SF3B3-204ENST00000563739 CCDC115Q96NT0 180 aa8.77□□□□□ -1.01
SF3B3-204ENST00000563739 SORT1Q99523 831 aa8.77□□□□□ -1.01
SF3B3-204ENST00000563739 PRPF18Q99633 342 aaKnown RBP8.77□□□□□ -1.01
SF3B3-204ENST00000563739 CITED1Q99966 193 aa8.77□□□□□ -1.01
SF3B3-204ENST00000563739 SLC35A5Q9BS91 424 aa8.77□□□□□ -1.01
SF3B3-204ENST00000563739 EMC6Q9BV81 110 aa8.77□□□□□ -1.01
SF3B3-204ENST00000563739 TAPBPLQ9BX59 468 aa8.77□□□□□ -1.01
SF3B3-204ENST00000563739 NTN4Q9HB63 628 aa8.77□□□□□ -1.01
SF3B3-204ENST00000563739 NKIRAS2Q9NYR9 191 aa8.77□□□□□ -1.01
SF3B3-204ENST00000563739 TAAR3PQ9P1P4 343 aa8.77□□□□□ -1.01
SF3B3-204ENST00000563739 MARCOQ9UEW3 520 aaPredicted RBP8.77□□□□□ -1.01
SF3B3-204ENST00000563739 MMP24Q9Y5R2 645 aa8.77□□□□□ -1.01
SF3B3-204ENST00000563739 PPIAL4EA0A075B759 164 aa8.76□□□□□ -1.01
SF3B3-204ENST00000563739 PPIAL4CA0A0B4J2A2 164 aa8.76□□□□□ -1.01
SF3B3-204ENST00000563739 IGHV1-69-2A0A0G2JMI3 117 aa8.76□□□□□ -1.01
SF3B3-204ENST00000563739 LOC102725191A0A1B0GVB3 256 aa8.76□□□□□ -1.01
SF3B3-204ENST00000563739 PPIAL4DF5H284 164 aa8.76□□□□□ -1.01
SF3B3-204ENST00000563739 SNNO75324 88 aaPredicted RBP8.76□□□□□ -1.01
SF3B3-204ENST00000563739 UBOX5O94941 541 aa8.76□□□□□ -1.01
SF3B3-204ENST00000563739 PPIAL4FP0DN26 164 aa8.76□□□□□ -1.01
SF3B3-204ENST00000563739 IGHV4-38-2P0DP08 117 aa8.76□□□□□ -1.01
SF3B3-204ENST00000563739 CD79AP11912 226 aa8.76□□□□□ -1.01
SF3B3-204ENST00000563739 ZNF12P17014 697 aa8.76□□□□□ -1.01
SF3B3-204ENST00000563739 OMGP23515 440 aa8.76□□□□□ -1.01
SF3B3-204ENST00000563739 HTR2AP28223 471 aa8.76□□□□□ -1.01
SF3B3-204ENST00000563739 GRPRP30550 384 aa8.76□□□□□ -1.01
SF3B3-204ENST00000563739 PTDSS1P48651 473 aaKnown RBP8.76□□□□□ -1.01
SF3B3-204ENST00000563739 SLC1A6P48664 564 aa8.76□□□□□ -1.01
SF3B3-204ENST00000563739 PAX2Q02962 417 aa8.76□□□□□ -1.01
SF3B3-204ENST00000563739 STX3Q13277 289 aa8.76□□□□□ -1.01
SF3B3-204ENST00000563739 RPS26P11Q5JNZ5 115 aaPredicted RBP8.76□□□□□ -1.01
SF3B3-204ENST00000563739 RNF220Q5VTB9 566 aa8.76□□□□□ -1.01
SF3B3-204ENST00000563739 REP15Q6BDI9 236 aa8.76□□□□□ -1.01
SF3B3-204ENST00000563739 WBP2NLQ6ICG8 309 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms