RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 CCNHP51946 323 aaPredicted RBP2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 HNRNPA3P51991 378 aaKnown RBP2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 APOC4P55056 127 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 PRPS1P60891 318 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 IGLV3-21P80748 117 aaPredicted RBP2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 MRPS22P82650 360 aaKnown RBP2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 IRF8Q02556 426 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 LIPEQ05469 1076 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 EGFEM1PQ0D2K5 195 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 ECH1Q13011 328 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 ARFRP1Q13795 201 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 DOC2AQ14183 400 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 GNMTQ14749 295 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 HERPUD1Q15011 391 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 ATP6AP1Q15904 470 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 C1orf100Q5SVJ3 147 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 C9orf135Q5VTT2 229 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 LCN12Q6JVE5 192 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 ANKRD26P1Q6NSI1 321 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 Q6ZSR3 168 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 SLC16A14Q7RTX9 510 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 PPP1R27Q86WC6 154 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 MFSD6LQ8IWD5 586 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 CMTM1Q8IZ96 169 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 TMEM61Q8N0U2 210 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 FAM184AQ8NB25 1140 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 HSD17B11Q8NBQ5 300 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 OR7G2Q8NG99 324 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 OR9A1PQ8NGU1 263 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 ZNF502Q8TBZ5 544 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 CAPSLQ8WWF8 208 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 ZNF578Q96N58 590 aaPredicted RBP2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 KCNA7Q96RP8 456 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 PLEKHF1Q96S99 279 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 P2RY13Q9BPV8 354 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 BCL7BQ9BQE9 202 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 TMEM246Q9BRR3 403 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 NICN1Q9BSH3 213 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 C19orf24Q9BVV8 132 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 FAIM2Q9BWQ8 316 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 IQCGQ9H095 443 aaKnown RBP2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 ILKAPQ9H0C8 392 aaPredicted RBP2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 OR51M1Q9H341 326 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 OR51J1Q9H342 316 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 NIPAL2Q9H841 368 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 SIAEQ9HAT2 523 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 SAMSN1Q9NSI8 373 aaKnown RBP2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 AIG1Q9NVV5 245 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 BTNL2Q9UIR0 455 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 A0A1B0GW55 424 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 ZFP92A6NM28 416 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 C12orf77C9JDV5 145 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 SPECC1L-ADORA2AF8WAN1 911 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 BOLA2-SMG1P6H3BVE0 249 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 AGPAT2O15120 278 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 SERF1AO75920 110 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 KLF8O95600 359 aaPredicted RBP2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 SEMG1P04279 462 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 ALDOBP05062 364 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 ACSM4P0C7M7 580 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 P0C879 139 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 DUX4L2P0CJ85 424 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 DUX4L3P0CJ86 424 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 DUX4L4P0CJ87 422 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 DUX4L5P0CJ88 424 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 DUX4L6P0CJ89 424 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 DUX4L7P0CJ90 424 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 DNAH10OSP0CZ25 163 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 GSTM3P21266 225 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 ZP3P21754 424 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 BCKDHBP21953 392 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 HSD17B2P37059 387 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 NAA10P41227 235 aaPredicted RBP2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 ARRB1P49407 418 aaPredicted RBP2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 BCAP31P51572 246 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 CRISP1P54107 249 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 STX17P56962 302 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 FBXW4P57775 412 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 ZNF45Q02386 682 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 TLE4Q04727 773 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 KIAA0040Q15053 153 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 ZNF630Q2M218 657 aaPredicted RBP2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 HIKESHIQ53FT3 197 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 PIP5KL1Q5T9C9 394 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 AGBL2Q5U5Z8 902 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 REEP3Q6NUK4 255 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 DUX4L9Q6RFH8 374 aaPredicted RBP2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 TFAP2EQ6VUC0 442 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 GDPD3Q7L5L3 318 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 OTUD6AQ7L8S5 288 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 PRSS41Q7RTY9 318 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 LHFPL3Q86UP9 236 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 RALGPS2Q86X27 583 aaPredicted RBP2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 GABRG1Q8N1C3 465 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 C11orf42Q8N5U0 333 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 COMMD1Q8N668 190 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 ZNF557Q8N988 423 aaPredicted RBP2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 OR2AP1Q8NGE2 309 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 CXorf40AQ8TE69 158 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 OR1E3Q8WZA6 343 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms