RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 UTS2O95399 124 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 ATP6V1G2O95670 118 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 LALBAP00709 142 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 IGLV2-14P01704 120 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 IGHG3P01860 377 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 SERPINA5P05154 406 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 KLK1P06870 262 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 STSP08842 583 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 MLNP12872 115 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 HLA-DOBP13765 273 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 NQO1P15559 274 aaKnown RBP1.74□□□□□ -2.13
RTF1-207ENST00000561076 MAGP20916 626 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 PROZP22891 400 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 F8A1P23610 371 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 SPRP35270 261 aaPredicted RBP1.74□□□□□ -2.13
RTF1-207ENST00000561076 ARL2P36404 184 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 VHLP40337 213 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 OPRD1P41143 372 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 PPP1R2P41236 205 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 XCR1P46094 333 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 GSSP48637 474 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 POU3F4P49335 361 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 SSR4P51571 173 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 RIDAP52758 137 aaKnown RBP1.74□□□□□ -2.13
RTF1-207ENST00000561076 CRISP1P54107 249 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 AP3S2P59780 193 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 ATP6V0D1P61421 351 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 RHOAP61586 193 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 RPS15AP62244 130 aaKnown RBP1.74□□□□□ -2.13
RTF1-207ENST00000561076 RPL8P62917 257 aaKnown RBP1.74□□□□□ -2.13
RTF1-207ENST00000561076 MRPS11P82912 194 aaKnown RBP1.74□□□□□ -2.13
RTF1-207ENST00000561076 VLDLRP98155 873 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 LTBQ06643 244 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 CKAP4Q07065 602 aaKnown RBP1.74□□□□□ -2.13
RTF1-207ENST00000561076 MADCAM1Q13477 382 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 IL18R1Q13478 541 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 ITPK1Q13572 414 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 VGLL4Q14135 290 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 DAZAP2Q15038 168 aaPredicted RBP1.74□□□□□ -2.13
RTF1-207ENST00000561076 TEAD2Q15562 447 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 FAM189A2Q15884 450 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 TNXAQ16473 311 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 NRF1Q16656 503 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 DGUOKQ16854 277 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 GOLGA7BQ2TAP0 167 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 PGGHGQ32M88 737 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 NDUFAF6Q330K2 333 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 RFX4Q33E94 735 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 ZBED5Q49AG3 693 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 AKIRIN2Q53H80 203 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 COQ5Q5HYK3 327 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 CLVS2Q5SYC1 327 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 TPTE2P1Q5T6R2 138 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 SDHAF4Q5VUM1 108 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 RESP18Q5W5W9 173 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 ZNF772Q68DY9 489 aaPredicted RBP1.74□□□□□ -2.13
RTF1-207ENST00000561076 RWDD4Q6NW29 188 aaKnown RBP1.74□□□□□ -2.13
RTF1-207ENST00000561076 PPP1R2P3Q6NXS1 205 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 EMBQ6PCB8 327 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 ZNF790Q6PG37 636 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 LCLAT1Q6UWP7 414 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 ZNF66Q6ZN08 573 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 MBOAT1Q6ZNC8 495 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 ZNF788Q6ZQV5 615 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 TMEM179Q6ZVK1 233 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 AHSA2Q719I0 299 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 ASCL5Q7RTU5 278 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 C16orf82Q7Z2V1 217 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 FAM122BQ7Z309 247 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 GGNQ86UU5 652 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 BOD1L2Q8IYS8 172 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 LRRC34Q8IZ02 419 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 PGAM4Q8N0Y7 254 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 LINC01561Q8N1V8 128 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 ZNF786Q8N393 782 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 FTMTQ8N4E7 242 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 MS4A15Q8N5U1 240 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 RBMXL3Q8N7X1 1067 aaKnown RBP1.74□□□□□ -2.13
RTF1-207ENST00000561076 STPG4Q8N801 248 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 PRR26Q8N8Z3 221 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 CYB561A3Q8NBI2 242 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 C19orf18Q8NEA5 215 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 DUSP18Q8NEJ0 188 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 OR1S2Q8NGQ3 325 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 UBA3Q8TBC4 463 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 TFGQ92734 400 aaPredicted RBP1.74□□□□□ -2.13
RTF1-207ENST00000561076 FGF11Q92914 225 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 CPNE4Q96A23 557 aaPredicted RBP1.74□□□□□ -2.13
RTF1-207ENST00000561076 ZNF486Q96H40 463 aaPredicted RBP1.74□□□□□ -2.13
RTF1-207ENST00000561076 TBX15Q96SF7 602 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 CYP2S1Q96SQ9 504 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 PSMB7Q99436 277 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 LGMNQ99538 433 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 C9orf16Q9BUW7 83 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 SSBP3Q9BWW4 388 aaPredicted RBP1.74□□□□□ -2.13
RTF1-207ENST00000561076 RACGAP1Q9H0H5 632 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 LIME1Q9H400 295 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 C1orf198Q9H425 327 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 NXF3Q9H4D5 531 aaKnown RBP1.74□□□□□ -2.13
RTF1-207ENST00000561076 WDR55Q9H6Y2 383 aaPredicted RBP1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms