RNA–Protein interactions for RNA: ENST00000560770.5

IDH3A-221, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 5

Gene IDH3A, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-221ENST00000560770 ALDH3B1P43353 468 aa12.79□□□□□ -0.36
IDH3A-221ENST00000560770 SCARB2Q14108 478 aa12.79□□□□□ -0.36
IDH3A-221ENST00000560770 ELFN2Q5R3F8 820 aa12.79□□□□□ -0.36
IDH3A-221ENST00000560770 REEP3Q6NUK4 255 aa12.79□□□□□ -0.36
IDH3A-221ENST00000560770 DLEU7Q6UYE1 221 aa12.79□□□□□ -0.36
IDH3A-221ENST00000560770 ZNF813Q6ZN06 617 aa12.79□□□□□ -0.36
IDH3A-221ENST00000560770 ZNF627Q7L945 461 aa12.79□□□□□ -0.36
IDH3A-221ENST00000560770 RBM45Q8IUH3 476 aaKnown RBP12.79□□□□□ -0.36
IDH3A-221ENST00000560770 ZNF584Q8IVC4 421 aa12.79□□□□□ -0.36
IDH3A-221ENST00000560770 UEVLDQ8IX04 471 aa12.79□□□□□ -0.36
IDH3A-221ENST00000560770 ZNF786Q8N393 782 aa12.79□□□□□ -0.36
IDH3A-221ENST00000560770 SMYD1Q8NB12 490 aa12.79□□□□□ -0.36
IDH3A-221ENST00000560770 SYT3Q9BQG1 590 aa12.79□□□□□ -0.36
IDH3A-221ENST00000560770 RAB1BQ9H0U4 201 aa12.79□□□□□ -0.36
IDH3A-221ENST00000560770 RAD21L1Q9H4I0 556 aa12.79□□□□□ -0.36
IDH3A-221ENST00000560770 CACYBPQ9HB71 228 aaKnown RBP12.79□□□□□ -0.36
IDH3A-221ENST00000560770 DYNLRB1Q9NP97 96 aa12.79□□□□□ -0.36
IDH3A-221ENST00000560770 TESQ9UGI8 421 aaKnown RBP12.79□□□□□ -0.36
IDH3A-221ENST00000560770 USP22Q9UPT9 525 aa12.79□□□□□ -0.36
IDH3A-221ENST00000560770 PLPP3O14495 311 aa12.78□□□□□ -0.36
IDH3A-221ENST00000560770 OR2T1O43869 369 aa12.78□□□□□ -0.36
IDH3A-221ENST00000560770 MFN2O95140 757 aa12.78□□□□□ -0.36
IDH3A-221ENST00000560770 NQO1P15559 274 aaKnown RBP12.78□□□□□ -0.36
IDH3A-221ENST00000560770 CDH15P55291 814 aa12.78□□□□□ -0.36
IDH3A-221ENST00000560770 PCBP3P57721 371 aaKnown RBP12.78□□□□□ -0.36
IDH3A-221ENST00000560770 FXNQ16595 210 aa12.78□□□□□ -0.36
IDH3A-221ENST00000560770 GSG1Q2KHT4 349 aa12.78□□□□□ -0.36
IDH3A-221ENST00000560770 BEND6Q5SZJ8 279 aaPredicted RBP12.78□□□□□ -0.36
IDH3A-221ENST00000560770 FAM91A1Q658Y4 838 aa12.78□□□□□ -0.36
IDH3A-221ENST00000560770 ULK3Q6PHR2 472 aa12.78□□□□□ -0.36
IDH3A-221ENST00000560770 CROCCP2Q86T23 111 aa12.78□□□□□ -0.36
IDH3A-221ENST00000560770 PAQR4Q8N4S7 273 aaPredicted RBP12.78□□□□□ -0.36
IDH3A-221ENST00000560770 RNF217Q8TC41 542 aa12.78□□□□□ -0.36
IDH3A-221ENST00000560770 UBASH3BQ8TF42 649 aa12.78□□□□□ -0.36
IDH3A-221ENST00000560770 DNAJA4Q8WW22 397 aaPredicted RBP12.78□□□□□ -0.36
IDH3A-221ENST00000560770 NEU4Q8WWR8 484 aaPredicted RBP12.78□□□□□ -0.36
IDH3A-221ENST00000560770 YIPF5Q969M3 257 aa12.78□□□□□ -0.36
IDH3A-221ENST00000560770 MRPL24Q96A35 216 aaKnown RBP12.78□□□□□ -0.36
IDH3A-221ENST00000560770 SLC47A1Q96FL8 570 aa12.78□□□□□ -0.36
IDH3A-221ENST00000560770 C7orf26Q96N11 449 aa12.78□□□□□ -0.36
IDH3A-221ENST00000560770 ANKRD27Q96NW4 1050 aa12.78□□□□□ -0.36
IDH3A-221ENST00000560770 MRPL39Q9NYK5 338 aaKnown RBP12.78□□□□□ -0.36
IDH3A-221ENST00000560770 GMEB1Q9Y692 573 aa12.78□□□□□ -0.36
IDH3A-221ENST00000560770 FAM157AC9JC47 383 aa12.77□□□□□ -0.37
IDH3A-221ENST00000560770 C11orf98E9PRG8 122 aa12.77□□□□□ -0.37
IDH3A-221ENST00000560770 POLR3GO15318 223 aaPredicted RBP12.77□□□□□ -0.37
IDH3A-221ENST00000560770 IFNGR1P15260 489 aa12.77□□□□□ -0.37
IDH3A-221ENST00000560770 GPX2P18283 190 aa12.77□□□□□ -0.37
IDH3A-221ENST00000560770 COL8A2P25067 703 aa12.77□□□□□ -0.37
IDH3A-221ENST00000560770 GIPRP48546 466 aa12.77□□□□□ -0.37
IDH3A-221ENST00000560770 PTDSS1P48651 473 aaKnown RBP12.77□□□□□ -0.37
IDH3A-221ENST00000560770 PUDPQ08623 228 aa12.77□□□□□ -0.37
IDH3A-221ENST00000560770 PMS2P3Q13401 168 aa12.77□□□□□ -0.37
IDH3A-221ENST00000560770 MELKQ14680 651 aa12.77□□□□□ -0.37
IDH3A-221ENST00000560770 RAB39AQ14964 217 aa12.77□□□□□ -0.37
IDH3A-221ENST00000560770 AGKQ53H12 422 aa12.77□□□□□ -0.37
IDH3A-221ENST00000560770 C5orf46Q6UWT4 87 aa12.77□□□□□ -0.37
IDH3A-221ENST00000560770 LINC00114Q6XXX2 140 aa12.77□□□□□ -0.37
IDH3A-221ENST00000560770 RETREG3Q86VR2 466 aa12.77□□□□□ -0.37
IDH3A-221ENST00000560770 SKA3Q8IX90 412 aa12.77□□□□□ -0.37
IDH3A-221ENST00000560770 LRRC17Q8N6Y2 441 aa12.77□□□□□ -0.37
IDH3A-221ENST00000560770 SCAIQ8N9R8 606 aa12.77□□□□□ -0.37
IDH3A-221ENST00000560770 OR6T1Q8NGN1 323 aa12.77□□□□□ -0.37
IDH3A-221ENST00000560770 OR6S1Q8NH40 331 aa12.77□□□□□ -0.37
IDH3A-221ENST00000560770 ARHGDIGQ99819 225 aa12.77□□□□□ -0.37
IDH3A-221ENST00000560770 FOXB1Q99853 325 aa12.77□□□□□ -0.37
IDH3A-221ENST00000560770 ULBP2Q9BZM5 246 aa12.77□□□□□ -0.37
IDH3A-221ENST00000560770 TMEM38AQ9H6F2 299 aa12.77□□□□□ -0.37
IDH3A-221ENST00000560770 NARFLQ9H6Q4 476 aa12.77□□□□□ -0.37
IDH3A-221ENST00000560770 CMAHPQ9Y471 501 aa12.77□□□□□ -0.37
IDH3A-221ENST00000560770 PAX7P23759 505 aa12.76□□□□□ -0.37
IDH3A-221ENST00000560770 CHN2P52757 468 aa12.76□□□□□ -0.37
IDH3A-221ENST00000560770 CRYBA2P53672 197 aa12.76□□□□□ -0.37
IDH3A-221ENST00000560770 BIDP55957 195 aa12.76□□□□□ -0.37
IDH3A-221ENST00000560770 MTPNP58546 118 aa12.76□□□□□ -0.37
IDH3A-221ENST00000560770 STX1BP61266 288 aa12.76□□□□□ -0.37
IDH3A-221ENST00000560770 ERVS71-1P61550 626 aa12.76□□□□□ -0.37
IDH3A-221ENST00000560770 DUSP7Q16829 419 aa12.76□□□□□ -0.37
IDH3A-221ENST00000560770 RINLQ6ZS11 566 aa12.76□□□□□ -0.37
IDH3A-221ENST00000560770 NET1Q7Z628 596 aaPredicted RBP12.76□□□□□ -0.37
IDH3A-221ENST00000560770 ARMC8Q8IUR7 673 aa12.76□□□□□ -0.37
IDH3A-221ENST00000560770 HIPK4Q8NE63 616 aa12.76□□□□□ -0.37
IDH3A-221ENST00000560770 CLDND2Q8NHS1 167 aa12.76□□□□□ -0.37
IDH3A-221ENST00000560770 TMEM54Q969K7 222 aa12.76□□□□□ -0.37
IDH3A-221ENST00000560770 THOC1Q96FV9 657 aaKnown RBP12.76□□□□□ -0.37
IDH3A-221ENST00000560770 LRR1Q96L50 414 aa12.76□□□□□ -0.37
IDH3A-221ENST00000560770 TSPAN32Q96QS1 320 aa12.76□□□□□ -0.37
IDH3A-221ENST00000560770 TMEM43Q9BTV4 400 aa12.76□□□□□ -0.37
IDH3A-221ENST00000560770 ASPNQ9BXN1 380 aa12.76□□□□□ -0.37
IDH3A-221ENST00000560770 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.76□□□□□ -0.37
IDH3A-221ENST00000560770 CORINQ9Y5Q5 1042 aa12.76□□□□□ -0.37
IDH3A-221ENST00000560770 CPSF4LA6NMK7 179 aaKnown RBP12.75□□□□□ -0.37
IDH3A-221ENST00000560770 ARHGAP32A7KAX9 2087 aa12.75□□□□□ -0.37
IDH3A-221ENST00000560770 AKAP8O43823 692 aaKnown RBP12.75□□□□□ -0.37
IDH3A-221ENST00000560770 ERLIN1O75477 346 aa12.75□□□□□ -0.37
IDH3A-221ENST00000560770 CCL2P13500 99 aa12.75□□□□□ -0.37
IDH3A-221ENST00000560770 ITGA2P17301 1181 aa12.75□□□□□ -0.37
IDH3A-221ENST00000560770 HNF1AP20823 631 aa12.75□□□□□ -0.37
IDH3A-221ENST00000560770 CD247P20963 164 aa12.75□□□□□ -0.37
IDH3A-221ENST00000560770 CSNK1A1P48729 337 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms