RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 MED29Q9NX70 200 aa13.25□□□□□ -0.29
SNRPA1-210ENST00000560383 CISD1Q9NZ45 108 aaKnown RBP13.25□□□□□ -0.29
SNRPA1-210ENST00000560383 JMJD1CQ15652 2540 aa13.24□□□□□ -0.29
SNRPA1-210ENST00000560383 KPNA4O00629 521 aaPredicted RBP13.24□□□□□ -0.29
SNRPA1-210ENST00000560383 GSTA4O15217 222 aa13.24□□□□□ -0.29
SNRPA1-210ENST00000560383 DCTN3O75935 186 aa13.24□□□□□ -0.29
SNRPA1-210ENST00000560383 OR6A2O95222 327 aa13.24□□□□□ -0.29
SNRPA1-210ENST00000560383 IFNW1P05000 195 aa13.24□□□□□ -0.29
SNRPA1-210ENST00000560383 ARF1P84077 181 aaKnown RBP13.24□□□□□ -0.29
SNRPA1-210ENST00000560383 PPP2R2BQ00005 443 aa13.24□□□□□ -0.29
SNRPA1-210ENST00000560383 ST3GAL3Q11203 375 aa13.24□□□□□ -0.29
SNRPA1-210ENST00000560383 TNK1Q13470 666 aa13.24□□□□□ -0.29
SNRPA1-210ENST00000560383 CLEC12BQ2HXU8 276 aa13.24□□□□□ -0.29
SNRPA1-210ENST00000560383 CEACAM16Q2WEN9 425 aa13.24□□□□□ -0.29
SNRPA1-210ENST00000560383 C3orf36Q3SXR2 165 aa13.24□□□□□ -0.29
SNRPA1-210ENST00000560383 PHYHD1Q5SRE7 291 aa13.24□□□□□ -0.29
SNRPA1-210ENST00000560383 OFCC1Q8IZS5 231 aa13.24□□□□□ -0.29
SNRPA1-210ENST00000560383 OR6X1Q8NH79 312 aa13.24□□□□□ -0.29
SNRPA1-210ENST00000560383 GEMIN6Q8WXD5 167 aaKnown RBP13.24□□□□□ -0.29
SNRPA1-210ENST00000560383 ADAD1Q96M93 576 aaKnown RBP13.24□□□□□ -0.29
SNRPA1-210ENST00000560383 CRLF2Q9HC73 371 aa13.24□□□□□ -0.29
SNRPA1-210ENST00000560383 MOV10Q9HCE1 1003 aaKnown RBP13.24□□□□□ -0.29
SNRPA1-210ENST00000560383 MAN2C1Q9NTJ4 1040 aa13.24□□□□□ -0.29
SNRPA1-210ENST00000560383 C20orf141Q9NUB4 165 aa13.24□□□□□ -0.29
SNRPA1-210ENST00000560383 CRNNQ9UBG3 495 aaPredicted RBP13.24□□□□□ -0.29
SNRPA1-210ENST00000560383 SNX13Q9Y5W8 968 aa13.24□□□□□ -0.29
SNRPA1-210ENST00000560383 ALPK2Q86TB3 2170 aa13.24□□□□□ -0.29
SNRPA1-210ENST00000560383 ZNF726A6NNF4 738 aa13.23□□□□□ -0.29
SNRPA1-210ENST00000560383 ZNF99A8MXY4 864 aaPredicted RBP13.23□□□□□ -0.29
SNRPA1-210ENST00000560383 M0R1B8 84 aa13.23□□□□□ -0.29
SNRPA1-210ENST00000560383 FFAR1O14842 300 aa13.23□□□□□ -0.29
SNRPA1-210ENST00000560383 OR7A10O76100 309 aa13.23□□□□□ -0.29
SNRPA1-210ENST00000560383 PRSS23O95084 383 aa13.23□□□□□ -0.29
SNRPA1-210ENST00000560383 SERPINA1P01009 418 aa13.23□□□□□ -0.29
SNRPA1-210ENST00000560383 HIST1H2ABP04908 130 aa13.23□□□□□ -0.29
SNRPA1-210ENST00000560383 IFNGR1P15260 489 aa13.23□□□□□ -0.29
SNRPA1-210ENST00000560383 FUT1P19526 365 aa13.23□□□□□ -0.29
SNRPA1-210ENST00000560383 CDH11P55287 796 aa13.23□□□□□ -0.29
SNRPA1-210ENST00000560383 SPOCK1Q08629 439 aa13.23□□□□□ -0.29
SNRPA1-210ENST00000560383 IFI44LQ53G44 452 aa13.23□□□□□ -0.29
SNRPA1-210ENST00000560383 SLC35D2Q76EJ3 337 aa13.23□□□□□ -0.29
SNRPA1-210ENST00000560383 HIST3H2AQ7L7L0 130 aa13.23□□□□□ -0.29
SNRPA1-210ENST00000560383 CCDC36Q8IYA8 594 aa13.23□□□□□ -0.29
SNRPA1-210ENST00000560383 PFN4Q8NHR9 129 aa13.23□□□□□ -0.29
SNRPA1-210ENST00000560383 HIST1H2ACQ93077 130 aa13.23□□□□□ -0.29
SNRPA1-210ENST00000560383 SGTBQ96EQ0 304 aa13.23□□□□□ -0.29
SNRPA1-210ENST00000560383 HSH2DQ96JZ2 352 aa13.23□□□□□ -0.29
SNRPA1-210ENST00000560383 TRAF4Q9BUZ4 470 aaPredicted RBP13.23□□□□□ -0.29
SNRPA1-210ENST00000560383 C1QTNF6Q9BXI9 259 aa13.23□□□□□ -0.29
SNRPA1-210ENST00000560383 BARX1Q9HBU1 254 aaPredicted RBP13.23□□□□□ -0.29
SNRPA1-210ENST00000560383 ARL8BQ9NVJ2 186 aa13.23□□□□□ -0.29
SNRPA1-210ENST00000560383 TAGLN3Q9UI15 199 aa13.23□□□□□ -0.29
SNRPA1-210ENST00000560383 MED31Q9Y3C7 131 aa13.23□□□□□ -0.29
SNRPA1-210ENST00000560383 PLCE1Q9P212 2302 aa13.23□□□□□ -0.29
SNRPA1-210ENST00000560383 ANK3Q12955 4377 aaKnown RBP13.23□□□□□ -0.29
SNRPA1-210ENST00000560383 CR1P17927 2039 aa13.22□□□□□ -0.29
SNRPA1-210ENST00000560383 A0A096LPE4 126 aa13.22□□□□□ -0.29
SNRPA1-210ENST00000560383 A0A1W2PPZ6 126 aa13.22□□□□□ -0.29
SNRPA1-210ENST00000560383 INAFM1C9JVW0 142 aa13.22□□□□□ -0.29
SNRPA1-210ENST00000560383 E7EQL1 145 aa13.22□□□□□ -0.29
SNRPA1-210ENST00000560383 C11orf98E9PRG8 122 aa13.22□□□□□ -0.29
SNRPA1-210ENST00000560383 M0R3G1 203 aa13.22□□□□□ -0.29
SNRPA1-210ENST00000560383 RNF13O43567 381 aa13.22□□□□□ -0.29
SNRPA1-210ENST00000560383 ZNF682O95780 498 aa13.22□□□□□ -0.29
SNRPA1-210ENST00000560383 IGKV3-15P01624 115 aa13.22□□□□□ -0.29
SNRPA1-210ENST00000560383 IGLV1-44P01699 117 aa13.22□□□□□ -0.29
SNRPA1-210ENST00000560383 CD8AP01732 235 aa13.22□□□□□ -0.29
SNRPA1-210ENST00000560383 HSD17B1P14061 328 aa13.22□□□□□ -0.29
SNRPA1-210ENST00000560383 FUT4P22083 530 aa13.22□□□□□ -0.29
SNRPA1-210ENST00000560383 PCSK6P29122 969 aa13.22□□□□□ -0.29
SNRPA1-210ENST00000560383 IFNA8P32881 189 aa13.22□□□□□ -0.29
SNRPA1-210ENST00000560383 UBE2NP61088 152 aaKnown RBP13.22□□□□□ -0.29
SNRPA1-210ENST00000560383 KRTAP1-1Q07627 177 aa13.22□□□□□ -0.29
SNRPA1-210ENST00000560383 CARD17Q5XLA6 110 aa13.22□□□□□ -0.29
SNRPA1-210ENST00000560383 SLC22A25Q6T423 547 aa13.22□□□□□ -0.29
SNRPA1-210ENST00000560383 B3GLCTQ6Y288 498 aa13.22□□□□□ -0.29
SNRPA1-210ENST00000560383 DNM1P46Q6ZS02 220 aa13.22□□□□□ -0.29
SNRPA1-210ENST00000560383 NANOGNBQ7Z5D8 188 aa13.22□□□□□ -0.29
SNRPA1-210ENST00000560383 TSEN54Q7Z6J9 526 aaKnown RBP13.22□□□□□ -0.29
SNRPA1-210ENST00000560383 PGAM4Q8N0Y7 254 aa13.22□□□□□ -0.29
SNRPA1-210ENST00000560383 DEPDC4Q8N2C3 294 aa13.22□□□□□ -0.29
SNRPA1-210ENST00000560383 TMEM54Q969K7 222 aa13.22□□□□□ -0.29
SNRPA1-210ENST00000560383 SLC25A44Q96H78 314 aaPredicted RBP13.22□□□□□ -0.29
SNRPA1-210ENST00000560383 CCT8L2Q96SF2 557 aa13.22□□□□□ -0.29
SNRPA1-210ENST00000560383 SEPHS2Q99611 448 aa13.22□□□□□ -0.29
SNRPA1-210ENST00000560383 DHRS9Q9BPW9 319 aa13.22□□□□□ -0.29
SNRPA1-210ENST00000560383 GORASP2Q9H8Y8 452 aa13.22□□□□□ -0.29
SNRPA1-210ENST00000560383 B3GAT2Q9NPZ5 323 aa13.22□□□□□ -0.29
SNRPA1-210ENST00000560383 DCAF13Q9NV06 445 aaKnown RBP13.22□□□□□ -0.29
SNRPA1-210ENST00000560383 FAM53CQ9NYF3 392 aa13.22□□□□□ -0.29
SNRPA1-210ENST00000560383 RPS6KA6Q9UK32 745 aa13.22□□□□□ -0.29
SNRPA1-210ENST00000560383 IGHV1-18A0A0C4DH31 117 aa13.21□□□□□ -0.29
SNRPA1-210ENST00000560383 NPIPB13A6NJU9 1138 aa13.21□□□□□ -0.29
SNRPA1-210ENST00000560383 NPIPB4C9JG80 1138 aa13.21□□□□□ -0.29
SNRPA1-210ENST00000560383 J3KTA2 159 aa13.21□□□□□ -0.29
SNRPA1-210ENST00000560383 SERPINI2O75830 405 aa13.21□□□□□ -0.29
SNRPA1-210ENST00000560383 UMPSP11172 480 aa13.21□□□□□ -0.29
SNRPA1-210ENST00000560383 CBR1P16152 277 aa13.21□□□□□ -0.29
SNRPA1-210ENST00000560383 NCK1P16333 377 aa13.21□□□□□ -0.29
SNRPA1-210ENST00000560383 TTKP33981 857 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms