RNA–Protein interactions for RNA: ENST00000560173.1

LDLR-211, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-211ENST00000560173 FAM98BQ52LJ0 330 aaKnown RBP8.23□□□□□ -1.09
LDLR-211ENST00000560173 BEX5Q5H9J7 111 aa8.23□□□□□ -1.09
LDLR-211ENST00000560173 TIMM23BQ5SRD1 257 aa8.23□□□□□ -1.09
LDLR-211ENST00000560173 OGFRL1Q5TC84 451 aaPredicted RBP8.23□□□□□ -1.09
LDLR-211ENST00000560173 CYP2R1Q6VVX0 501 aa8.23□□□□□ -1.09
LDLR-211ENST00000560173 HIST3H2AQ7L7L0 130 aa8.23□□□□□ -1.09
LDLR-211ENST00000560173 LINGO2Q7L985 606 aa8.23□□□□□ -1.09
LDLR-211ENST00000560173 P2RY8Q86VZ1 359 aa8.23□□□□□ -1.09
LDLR-211ENST00000560173 WDFY1Q8IWB7 410 aa8.23□□□□□ -1.09
LDLR-211ENST00000560173 NRMQ8IXM6 262 aa8.23□□□□□ -1.09
LDLR-211ENST00000560173 PAPD5Q8NDF8 572 aaKnown RBP8.23□□□□□ -1.09
LDLR-211ENST00000560173 ICA1LQ8NDH6 482 aa8.23□□□□□ -1.09
LDLR-211ENST00000560173 C1orf162Q8NEQ5 155 aaPredicted RBP8.23□□□□□ -1.09
LDLR-211ENST00000560173 ANKK1Q8NFD2 765 aa8.23□□□□□ -1.09
LDLR-211ENST00000560173 LIPHQ8WWY8 451 aa8.23□□□□□ -1.09
LDLR-211ENST00000560173 ACOT11Q8WXI4 607 aaPredicted RBP8.23□□□□□ -1.09
LDLR-211ENST00000560173 HSD17B8Q92506 261 aa8.23□□□□□ -1.09
LDLR-211ENST00000560173 NRGNQ92686 78 aa8.23□□□□□ -1.09
LDLR-211ENST00000560173 HIST1H2ACQ93077 130 aa8.23□□□□□ -1.09
LDLR-211ENST00000560173 PIK3IP1Q96FE7 263 aa8.23□□□□□ -1.09
LDLR-211ENST00000560173 TXNDC15Q96J42 360 aa8.23□□□□□ -1.09
LDLR-211ENST00000560173 DHRS1Q96LJ7 313 aa8.23□□□□□ -1.09
LDLR-211ENST00000560173 ALKBH3Q96Q83 286 aaPredicted RBP8.23□□□□□ -1.09
LDLR-211ENST00000560173 HS3ST6Q96QI5 342 aa8.23□□□□□ -1.09
LDLR-211ENST00000560173 LINC00470Q9BZP3 86 aa8.23□□□□□ -1.09
LDLR-211ENST00000560173 MED29Q9NX70 200 aa8.23□□□□□ -1.09
LDLR-211ENST00000560173 LRCH1Q9Y2L9 728 aa8.23□□□□□ -1.09
LDLR-211ENST00000560173 MAP1AP78559 2803 aaPredicted RBP8.23□□□□□ -1.09
LDLR-211ENST00000560173 A0A087WUU8 490 aa8.22□□□□□ -1.09
LDLR-211ENST00000560173 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.22□□□□□ -1.09
LDLR-211ENST00000560173 A0A1W2PRQ8 180 aa8.22□□□□□ -1.09
LDLR-211ENST00000560173 TCRBV5S2A0A599 114 aa8.22□□□□□ -1.09
LDLR-211ENST00000560173 CIB4A0PJX0 185 aa8.22□□□□□ -1.09
LDLR-211ENST00000560173 C11orf98E9PRG8 122 aa8.22□□□□□ -1.09
LDLR-211ENST00000560173 RNF13O43567 381 aa8.22□□□□□ -1.09
LDLR-211ENST00000560173 SERPINI2O75830 405 aa8.22□□□□□ -1.09
LDLR-211ENST00000560173 KRT33AO76009 404 aa8.22□□□□□ -1.09
LDLR-211ENST00000560173 DIRAS1O95057 198 aa8.22□□□□□ -1.09
LDLR-211ENST00000560173 TSPAN19P0C672 248 aa8.22□□□□□ -1.09
LDLR-211ENST00000560173 IFI30P13284 250 aa8.22□□□□□ -1.09
LDLR-211ENST00000560173 IFNGR1P15260 489 aa8.22□□□□□ -1.09
LDLR-211ENST00000560173 ITGA2P17301 1181 aa8.22□□□□□ -1.09
LDLR-211ENST00000560173 MAKP20794 623 aa8.22□□□□□ -1.09
LDLR-211ENST00000560173 AHCYP23526 432 aa8.22□□□□□ -1.09
LDLR-211ENST00000560173 AQP2P41181 271 aa8.22□□□□□ -1.09
LDLR-211ENST00000560173 TGFBR3Q03167 851 aa8.22□□□□□ -1.09
LDLR-211ENST00000560173 PRKCDQ05655 676 aa8.22□□□□□ -1.09
LDLR-211ENST00000560173 CHRNB3Q05901 458 aa8.22□□□□□ -1.09
LDLR-211ENST00000560173 RPL18Q07020 188 aaKnown RBP8.22□□□□□ -1.09
LDLR-211ENST00000560173 DGCR6Q14129 220 aa8.22□□□□□ -1.09
LDLR-211ENST00000560173 PPA1Q15181 289 aa8.22□□□□□ -1.09
LDLR-211ENST00000560173 C9orf135Q5VTT2 229 aa8.22□□□□□ -1.09
LDLR-211ENST00000560173 OR7E24Q6IFN5 339 aa8.22□□□□□ -1.09
LDLR-211ENST00000560173 ZNF730Q6ZMV8 503 aa8.22□□□□□ -1.09
LDLR-211ENST00000560173 MBOAT2Q6ZWT7 520 aa8.22□□□□□ -1.09
LDLR-211ENST00000560173 SLC35D2Q76EJ3 337 aa8.22□□□□□ -1.09
LDLR-211ENST00000560173 SSX8Q7RTT4 187 aa8.22□□□□□ -1.09
LDLR-211ENST00000560173 ABHD12BQ7Z5M8 362 aaPredicted RBP8.22□□□□□ -1.09
LDLR-211ENST00000560173 CDH24Q86UP0 819 aa8.22□□□□□ -1.09
LDLR-211ENST00000560173 C20orf196Q8IYI0 205 aa8.22□□□□□ -1.09
LDLR-211ENST00000560173 RNF113BQ8IZP6 322 aaKnown RBP8.22□□□□□ -1.09
LDLR-211ENST00000560173 C17orf78Q8N4C9 275 aa8.22□□□□□ -1.09
LDLR-211ENST00000560173 PACRGLQ8N7B6 248 aa8.22□□□□□ -1.09
LDLR-211ENST00000560173 SLC7A13Q8TCU3 470 aa8.22□□□□□ -1.09
LDLR-211ENST00000560173 BPIFA2Q96DR5 249 aa8.22□□□□□ -1.09
LDLR-211ENST00000560173 BOD1Q96IK1 185 aa8.22□□□□□ -1.09
LDLR-211ENST00000560173 MUS81Q96NY9 551 aa8.22□□□□□ -1.09
LDLR-211ENST00000560173 PIP5K1AQ99755 562 aa8.22□□□□□ -1.09
LDLR-211ENST00000560173 FUZQ9BT04 418 aa8.22□□□□□ -1.09
LDLR-211ENST00000560173 BDH2Q9BUT1 245 aa8.22□□□□□ -1.09
LDLR-211ENST00000560173 EMC6Q9BV81 110 aa8.22□□□□□ -1.09
LDLR-211ENST00000560173 MAGIXQ9H6Y5 334 aa8.22□□□□□ -1.09
LDLR-211ENST00000560173 PLEKHF2Q9H8W4 249 aa8.22□□□□□ -1.09
LDLR-211ENST00000560173 NPAP1Q9NZP6 1156 aa8.22□□□□□ -1.09
LDLR-211ENST00000560173 HIF3AQ9Y2N7 669 aa8.22□□□□□ -1.09
LDLR-211ENST00000560173 FAM32AQ9Y421 112 aaKnown RBP8.22□□□□□ -1.09
LDLR-211ENST00000560173 SLC25A15Q9Y619 301 aa8.22□□□□□ -1.09
LDLR-211ENST00000560173 NIPBLQ6KC79 2804 aaeCLIP8.22□□□□□ -1.09
LDLR-211ENST00000560173 TRBV4-1A0A0J9YWV2 114 aa8.21□□□□□ -1.1
LDLR-211ENST00000560173 SLC35F4A4IF30 521 aa8.21□□□□□ -1.1
LDLR-211ENST00000560173 BLOC1S5-TXNDC5H3BN57 136 aa8.21□□□□□ -1.1
LDLR-211ENST00000560173 RPL36A-HNRNPH2H7BZ11 118 aa8.21□□□□□ -1.1
LDLR-211ENST00000560173 DEAF1O75398 565 aaPredicted RBP8.21□□□□□ -1.1
LDLR-211ENST00000560173 FABP3P05413 133 aa8.21□□□□□ -1.1
LDLR-211ENST00000560173 RAP2AP10114 183 aa8.21□□□□□ -1.1
LDLR-211ENST00000560173 NR1H2P55055 460 aa8.21□□□□□ -1.1
LDLR-211ENST00000560173 SH3BGRP55822 239 aaPredicted RBP8.21□□□□□ -1.1
LDLR-211ENST00000560173 BIDP55957 195 aa8.21□□□□□ -1.1
LDLR-211ENST00000560173 RPS4XP62701 263 aaKnown RBP8.21□□□□□ -1.1
LDLR-211ENST00000560173 ROR2Q01974 943 aaKnown RBP8.21□□□□□ -1.1
LDLR-211ENST00000560173 SEC23BQ15437 767 aa8.21□□□□□ -1.1
LDLR-211ENST00000560173 FGD3Q5JSP0 725 aa8.21□□□□□ -1.1
LDLR-211ENST00000560173 PHYHD1Q5SRE7 291 aa8.21□□□□□ -1.1
LDLR-211ENST00000560173 CARD17Q5XLA6 110 aa8.21□□□□□ -1.1
LDLR-211ENST00000560173 ALKBH2Q6NS38 261 aa8.21□□□□□ -1.1
LDLR-211ENST00000560173 HMBOX1Q6NT76 420 aa8.21□□□□□ -1.1
LDLR-211ENST00000560173 PODNL1Q6PEZ8 512 aa8.21□□□□□ -1.1
LDLR-211ENST00000560173 TBPL2Q6SJ96 375 aa8.21□□□□□ -1.1
LDLR-211ENST00000560173 PAMR1Q6UXH9 720 aa8.21□□□□□ -1.1
LDLR-211ENST00000560173 IZUMO2Q6UXV1 221 aa8.21□□□□□ -1.1
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