RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 CLRN1P58418 232 aa9.28□□□□□ -0.92
TPM1-221ENST00000559831 RAP1BP61224 184 aa9.28□□□□□ -0.92
TPM1-221ENST00000559831 ISL1P61371 349 aa9.28□□□□□ -0.92
TPM1-221ENST00000559831 RAP1AP62834 184 aa9.28□□□□□ -0.92
TPM1-221ENST00000559831 CD47Q08722 323 aa9.28□□□□□ -0.92
TPM1-221ENST00000559831 CAMK2DQ13557 499 aa9.28□□□□□ -0.92
TPM1-221ENST00000559831 CRMP1Q14194 572 aa9.28□□□□□ -0.92
TPM1-221ENST00000559831 MAD2L1BPQ15013 274 aaPredicted RBP9.28□□□□□ -0.92
TPM1-221ENST00000559831 PDK3Q15120 406 aa9.28□□□□□ -0.92
TPM1-221ENST00000559831 RNPS1Q15287 305 aaKnown RBP9.28□□□□□ -0.92
TPM1-221ENST00000559831 EMC4Q5J8M3 183 aa9.28□□□□□ -0.92
TPM1-221ENST00000559831 ARMC4Q5T2S8 1044 aa9.28□□□□□ -0.92
TPM1-221ENST00000559831 FAM205BPQ63HN1 556 aa9.28□□□□□ -0.92
TPM1-221ENST00000559831 GTF2IRD2BQ6EKJ0 949 aa9.28□□□□□ -0.92
TPM1-221ENST00000559831 NIPAL3Q6P499 406 aa9.28□□□□□ -0.92
TPM1-221ENST00000559831 PLBD1Q6P4A8 553 aa9.28□□□□□ -0.92
TPM1-221ENST00000559831 C3P1Q6ZMU1 363 aa9.28□□□□□ -0.92
TPM1-221ENST00000559831 CXXC5Q7LFL8 322 aaKnown RBP9.28□□□□□ -0.92
TPM1-221ENST00000559831 HDDC2Q7Z4H3 204 aa9.28□□□□□ -0.92
TPM1-221ENST00000559831 BCDIN3DQ7Z5W3 292 aaKnown RBP9.28□□□□□ -0.92
TPM1-221ENST00000559831 GTF2IRD2Q86UP8 949 aa9.28□□□□□ -0.92
TPM1-221ENST00000559831 CPOQ8IVL8 374 aa9.28□□□□□ -0.92
TPM1-221ENST00000559831 WDFY1Q8IWB7 410 aa9.28□□□□□ -0.92
TPM1-221ENST00000559831 TUSC5Q8IXB3 177 aa9.28□□□□□ -0.92
TPM1-221ENST00000559831 SYT14Q8NB59 555 aa9.28□□□□□ -0.92
TPM1-221ENST00000559831 SLC37A3Q8NCC5 494 aa9.28□□□□□ -0.92
TPM1-221ENST00000559831 OR8J1Q8NGP2 316 aa9.28□□□□□ -0.92
TPM1-221ENST00000559831 ZNF519Q8TB69 540 aa9.28□□□□□ -0.92
TPM1-221ENST00000559831 TMEM163Q8TC26 289 aa9.28□□□□□ -0.92
TPM1-221ENST00000559831 HDAC2Q92769 488 aaKnown RBP9.28□□□□□ -0.92
TPM1-221ENST00000559831 NMNAT3Q96T66 252 aa9.28□□□□□ -0.92
TPM1-221ENST00000559831 MED20Q9H944 212 aa9.28□□□□□ -0.92
TPM1-221ENST00000559831 HINT3Q9NQE9 182 aaKnown RBP9.28□□□□□ -0.92
TPM1-221ENST00000559831 DNAJC27Q9NZQ0 273 aa9.28□□□□□ -0.92
TPM1-221ENST00000559831 EMC3Q9P0I2 261 aa9.28□□□□□ -0.92
TPM1-221ENST00000559831 FLVCR1Q9Y5Y0 555 aa9.28□□□□□ -0.92
TPM1-221ENST00000559831 HSPE1-MOB4S4R3N1 261 aa9.28□□□□□ -0.92
TPM1-221ENST00000559831 COL6A6A6NMZ7 2263 aa9.28□□□□□ -0.92
TPM1-221ENST00000559831 SPTA1P02549 2419 aa9.27□□□□□ -0.92
TPM1-221ENST00000559831 ATMQ13315 3056 aa9.27□□□□□ -0.93
TPM1-221ENST00000559831 IGKV3D-15A0A087WSY6 115 aa9.27□□□□□ -0.93
TPM1-221ENST00000559831 NPIPB13A6NJU9 1138 aa9.27□□□□□ -0.93
TPM1-221ENST00000559831 NPIPB4C9JG80 1138 aa9.27□□□□□ -0.93
TPM1-221ENST00000559831 PRR23D1E9PI22 279 aaPredicted RBP9.27□□□□□ -0.93
TPM1-221ENST00000559831 GPR171O14626 319 aa9.27□□□□□ -0.93
TPM1-221ENST00000559831 SLC19A2O60779 497 aa9.27□□□□□ -0.93
TPM1-221ENST00000559831 TRMUO75648 421 aaKnown RBP9.27□□□□□ -0.93
TPM1-221ENST00000559831 SMNDC1O75940 238 aaKnown RBP eCLIP9.27□□□□□ -0.931e-8■■□□□ 11.9
TPM1-221ENST00000559831 IGHG1P01857 330 aa9.27□□□□□ -0.93
TPM1-221ENST00000559831 YES1P07947 543 aa9.27□□□□□ -0.93
TPM1-221ENST00000559831 PRR23D2P0DMB1 279 aaPredicted RBP9.27□□□□□ -0.93
TPM1-221ENST00000559831 PAICSP22234 425 aaKnown RBP9.27□□□□□ -0.93
TPM1-221ENST00000559831 PTGER4P35408 488 aa9.27□□□□□ -0.93
TPM1-221ENST00000559831 SLC16A1P53985 500 aa9.27□□□□□ -0.93
TPM1-221ENST00000559831 SNRPGP62308 76 aaKnown RBP9.27□□□□□ -0.93
TPM1-221ENST00000559831 RUNX1T1Q06455 604 aa9.27□□□□□ -0.93
TPM1-221ENST00000559831 DBPQ10586 325 aaPredicted RBP9.27□□□□□ -0.93
TPM1-221ENST00000559831 ITGADQ13349 1161 aa9.27□□□□□ -0.93
TPM1-221ENST00000559831 KLHL12Q53G59 568 aa9.27□□□□□ -0.93
TPM1-221ENST00000559831 TMEM201Q5SNT2 666 aa9.27□□□□□ -0.93
TPM1-221ENST00000559831 NSUN5P2Q63ZY6 315 aa9.27□□□□□ -0.93
TPM1-221ENST00000559831 NHLRC1Q6VVB1 395 aa9.27□□□□□ -0.93
TPM1-221ENST00000559831 AAED1Q7RTV5 226 aa9.27□□□□□ -0.93
TPM1-221ENST00000559831 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.27□□□□□ -0.93
TPM1-221ENST00000559831 ADGRE4PQ86SQ3 457 aa9.27□□□□□ -0.93
TPM1-221ENST00000559831 ADCK1Q86TW2 530 aa9.27□□□□□ -0.93
TPM1-221ENST00000559831 MARVELD2Q8N4S9 558 aa9.27□□□□□ -0.93
TPM1-221ENST00000559831 ZIC4Q8N9L1 334 aa9.27□□□□□ -0.93
TPM1-221ENST00000559831 C9orf106Q8NAJ2 232 aa9.27□□□□□ -0.93
TPM1-221ENST00000559831 NPEPL1Q8NDH3 523 aa9.27□□□□□ -0.93
TPM1-221ENST00000559831 ST6GALNAC3Q8NDV1 305 aa9.27□□□□□ -0.93
TPM1-221ENST00000559831 NOXO1Q8NFA2 376 aa9.27□□□□□ -0.93
TPM1-221ENST00000559831 BBS1Q8NFJ9 593 aa9.27□□□□□ -0.93
TPM1-221ENST00000559831 OR9Q1Q8NGQ5 310 aa9.27□□□□□ -0.93
TPM1-221ENST00000559831 OR6X1Q8NH79 312 aa9.27□□□□□ -0.93
TPM1-221ENST00000559831 RHOXF1Q8NHV9 184 aa9.27□□□□□ -0.93
TPM1-221ENST00000559831 APH1BQ8WW43 257 aa9.27□□□□□ -0.93
TPM1-221ENST00000559831 TRUB1Q8WWH5 349 aaKnown RBP9.27□□□□□ -0.93
TPM1-221ENST00000559831 WNT2BQ93097 391 aa9.27□□□□□ -0.93
TPM1-221ENST00000559831 ZNF566Q969W8 418 aa9.27□□□□□ -0.93
TPM1-221ENST00000559831 LRR1Q96L50 414 aa9.27□□□□□ -0.93
TPM1-221ENST00000559831 ADAD1Q96M93 576 aaKnown RBP9.27□□□□□ -0.93
TPM1-221ENST00000559831 OR51V1Q9H2C8 321 aa9.27□□□□□ -0.93
TPM1-221ENST00000559831 TP63Q9H3D4 680 aaPredicted RBP9.27□□□□□ -0.93
TPM1-221ENST00000559831 RERGLQ9H628 205 aa9.27□□□□□ -0.93
TPM1-221ENST00000559831 RPRD1BQ9NQG5 326 aaKnown RBP9.27□□□□□ -0.93
TPM1-221ENST00000559831 CLN6Q9NWW5 311 aa9.27□□□□□ -0.93
TPM1-221ENST00000559831 UBAP1Q9NZ09 502 aa9.27□□□□□ -0.93
TPM1-221ENST00000559831 H2AFY2Q9P0M6 372 aaPredicted RBP9.27□□□□□ -0.93
TPM1-221ENST00000559831 ING1Q9UK53 422 aaPredicted RBP9.27□□□□□ -0.93
TPM1-221ENST00000559831 LRCH1Q9Y2L9 728 aa9.27□□□□□ -0.93
TPM1-221ENST00000559831 NOSIPQ9Y314 301 aaKnown RBP9.27□□□□□ -0.93
TPM1-221ENST00000559831 PCDHGB5Q9Y5G0 923 aa9.27□□□□□ -0.93
TPM1-221ENST00000559831 FREM1Q5H8C1 2179 aa9.27□□□□□ -0.93
TPM1-221ENST00000559831 PRSS37A4D1T9 235 aa9.26□□□□□ -0.93
TPM1-221ENST00000559831 OR6C68A6NDL8 312 aa9.26□□□□□ -0.93
TPM1-221ENST00000559831 CD8B2A6NJW9 211 aa9.26□□□□□ -0.93
TPM1-221ENST00000559831 ZNF724A8MTY0 619 aa9.26□□□□□ -0.93
TPM1-221ENST00000559831 ENTPD6O75354 484 aa9.26□□□□□ -0.93
TPM1-221ENST00000559831 SLC43A1O75387 559 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms