RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 SLC22A8Q8TCC7 542 aa5.29□□□□□ -1.56
USP3-212ENST00000559276 NUDT8Q8WV74 236 aa5.29□□□□□ -1.56
USP3-212ENST00000559276 AKAP1Q92667 903 aaKnown RBP eCLIP5.29□□□□□ -1.56
USP3-212ENST00000559276 UFD1Q92890 307 aa5.29□□□□□ -1.56
USP3-212ENST00000559276 RIT1Q92963 219 aa5.29□□□□□ -1.56
USP3-212ENST00000559276 RNASE6Q93091 150 aaKnown RBP5.29□□□□□ -1.56
USP3-212ENST00000559276 RFKQ969G6 155 aa5.29□□□□□ -1.56
USP3-212ENST00000559276 RGMAQ96B86 450 aa5.29□□□□□ -1.56
USP3-212ENST00000559276 PPCDCQ96CD2 204 aa5.29□□□□□ -1.56
USP3-212ENST00000559276 MBD6Q96DN6 1003 aa5.29□□□□□ -1.56
USP3-212ENST00000559276 RBM18Q96H35 190 aaKnown RBP5.29□□□□□ -1.56
USP3-212ENST00000559276 WDYHV1Q96HA8 205 aa5.29□□□□□ -1.56
USP3-212ENST00000559276 DIRAS2Q96HU8 199 aa5.29□□□□□ -1.56
USP3-212ENST00000559276 GNRHR2Q96P88 292 aa5.29□□□□□ -1.56
USP3-212ENST00000559276 NEDD4LQ96PU5 975 aa5.29□□□□□ -1.56
USP3-212ENST00000559276 GAL3ST4Q96RP7 486 aa5.29□□□□□ -1.56
USP3-212ENST00000559276 SMR3AQ99954 134 aa5.29□□□□□ -1.56
USP3-212ENST00000559276 SLC35A5Q9BS91 424 aa5.29□□□□□ -1.56
USP3-212ENST00000559276 G6PC3Q9BUM1 346 aa5.29□□□□□ -1.56
USP3-212ENST00000559276 SPATA5L1Q9BVQ7 753 aa5.29□□□□□ -1.56
USP3-212ENST00000559276 TEX12Q9BXU0 123 aa5.29□□□□□ -1.56
USP3-212ENST00000559276 PRDM14Q9GZV8 571 aa5.29□□□□□ -1.56
USP3-212ENST00000559276 C11orf54Q9H0W9 315 aaPredicted RBP5.29□□□□□ -1.56
USP3-212ENST00000559276 RANBP3Q9H6Z4 567 aaPredicted RBP5.29□□□□□ -1.56
USP3-212ENST00000559276 PPP1R3EQ9H7J1 279 aa5.29□□□□□ -1.56
USP3-212ENST00000559276 NMNAT1Q9HAN9 279 aaPredicted RBP5.29□□□□□ -1.56
USP3-212ENST00000559276 RANGRFQ9HD47 186 aaPredicted RBP5.29□□□□□ -1.56
USP3-212ENST00000559276 SNTG1Q9NSN8 517 aa5.29□□□□□ -1.56
USP3-212ENST00000559276 GIMAP4Q9NUV9 329 aa5.29□□□□□ -1.56
USP3-212ENST00000559276 MED17Q9NVC6 651 aa5.29□□□□□ -1.56
USP3-212ENST00000559276 RLIMQ9NVW2 624 aa5.29□□□□□ -1.56
USP3-212ENST00000559276 ASB6Q9NWX5 421 aa5.29□□□□□ -1.56
USP3-212ENST00000559276 TXNL4BQ9NX01 149 aaKnown RBP5.29□□□□□ -1.56
USP3-212ENST00000559276 TEX10Q9NXF1 929 aaPredicted RBP5.29□□□□□ -1.56
USP3-212ENST00000559276 CNIH4Q9P003 139 aa5.29□□□□□ -1.56
USP3-212ENST00000559276 B4GALT7Q9UBV7 327 aa5.29□□□□□ -1.56
USP3-212ENST00000559276 COPS7AQ9UBW8 275 aa5.29□□□□□ -1.56
USP3-212ENST00000559276 REV1Q9UBZ9 1251 aa5.29□□□□□ -1.56
USP3-212ENST00000559276 TESQ9UGI8 421 aaKnown RBP5.29□□□□□ -1.56
USP3-212ENST00000559276 SLC6A5Q9Y345 797 aa5.29□□□□□ -1.56
USP3-212ENST00000559276 NSD1Q96L73 2696 aaPredicted RBP5.29□□□□□ -1.56
USP3-212ENST00000559276 MED12Q93074 2177 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 A0A1B0GVI7 797 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 FAM240BA0A1B0GVZ2 78 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 GNG14A0A1W2PPG7 69 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 MBD3L4A6NDZ8 208 aaPredicted RBP5.28□□□□□ -1.56
USP3-212ENST00000559276 MBD3L3A6NE82 208 aaPredicted RBP5.28□□□□□ -1.56
USP3-212ENST00000559276 OR6C70A6NIJ9 312 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 MBD3L5A6NJ08 208 aaPredicted RBP5.28□□□□□ -1.56
USP3-212ENST00000559276 OR6C76A6NM76 312 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 HSPB2A8KAH6 182 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 PRODHO43272 600 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 LYRM1O43325 122 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 SSX4O60224 188 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 TMEM127O75204 238 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 CDRT1O95170 752 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 HLA-DPB1P04440 258 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 H1F0P07305 194 aaKnown RBP5.28□□□□□ -1.56
USP3-212ENST00000559276 NUDT7P0C024 238 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 FAM157BP0CG42 384 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 SLC35E2P0CK97 266 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 ACP2P11117 423 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 GDF1P27539 372 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 HOXC12P31275 282 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 IFNA8P32881 189 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 CHI3L1P36222 383 aaPredicted RBP5.28□□□□□ -1.56
USP3-212ENST00000559276 ASCL1P50553 236 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 XKP51811 444 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 ATP12AP54707 1039 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 DSTNP60981 165 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 RAE1P78406 368 aaKnown RBP5.28□□□□□ -1.56
USP3-212ENST00000559276 FOXF2Q12947 444 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 HNRNPA0Q13151 305 aaKnown RBP5.28□□□□□ -1.56
USP3-212ENST00000559276 BIKQ13323 160 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 GNA13Q14344 377 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 TRAM1Q15629 374 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 HSPB2Q16082 182 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 KLHL12Q53G59 568 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 EIPR1Q53HC9 387 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 PYDC2Q56P42 97 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 CEP78Q5JTW2 689 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 WIPI1Q5MNZ9 446 aaPredicted RBP5.28□□□□□ -1.56
USP3-212ENST00000559276 ZBTB37Q5TC79 503 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 PRAMEF8Q5VWM4 474 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 PRAMEF7Q5VXH5 474 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 PLXDC2Q6UX71 529 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 PAMR1Q6UXH9 720 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 BAIAP2L2Q6UXY1 529 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 ADGRE4PQ86SQ3 457 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 DND1Q8IYX4 353 aaKnown RBP5.28□□□□□ -1.56
USP3-212ENST00000559276 PRR22Q8IZ63 422 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 Q8N402 240 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 YIPF7Q8N8F6 280 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 C9orf106Q8NAJ2 232 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 TOR1AIP2Q8NFQ8 470 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 OR9Q2Q8NGE9 314 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 OR52N1Q8NH53 320 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 MBD3L2Q8NHZ7 208 aaPredicted RBP5.28□□□□□ -1.56
USP3-212ENST00000559276 NFKBIDQ8NI38 313 aa5.28□□□□□ -1.56
USP3-212ENST00000559276 LINC01560Q8TB33 94 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms