RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 MAPK11Q15759 364 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 ETFDHQ16134 617 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 GSTA3Q16772 222 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 ZNF311Q5JNZ3 666 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 LCE1EQ5T753 118 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 C1orf140Q5VVS0 124 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 CD276Q5ZPR3 534 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 WBP2NLQ6ICG8 309 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 OR7E24Q6IFN5 339 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 NIPAL3Q6P499 406 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 PAQR6Q6TCH4 344 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 CLEC2AQ6UVW9 174 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 KDM8Q8N371 416 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 MUC15Q8N387 334 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 ZNF525Q8N782 197 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 WDR31Q8NA23 367 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 NFKBIDQ8NI38 313 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 OIT3Q8WWZ8 545 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 C3orf49Q96BT1 292 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 FBXO17Q96EF6 278 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 THOC1Q96FV9 657 aaKnown RBP6.4□□□□□ -1.38
SPG11-213ENST00000558988 KCNJ15Q99712 375 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 DHRS9Q9BPW9 319 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 FKRPQ9H9S5 495 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 SLC17A5Q9NRA2 495 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 CBLN4Q9NTU7 201 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 ZIM2Q9NZV7 527 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 ADAM21Q9UKJ8 722 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 MOKQ9UQ07 419 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 MGAT4BQ9UQ53 548 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 TRAPPC4Q9Y296 219 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 USH1CQ9Y6N9 552 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 CR1P17927 2039 aa6.4□□□□□ -1.39
SPG11-213ENST00000558988 NF1P21359 2839 aa6.39□□□□□ -1.39
SPG11-213ENST00000558988 AQP7P3A6NL99 342 aa6.39□□□□□ -1.39
SPG11-213ENST00000558988 A8MVM7 634 aa6.39□□□□□ -1.39
SPG11-213ENST00000558988 ZNF587BE7ETH6 402 aa6.39□□□□□ -1.39
SPG11-213ENST00000558988 CLIC1O00299 241 aa6.39□□□□□ -1.39
SPG11-213ENST00000558988 POLR3GO15318 223 aaPredicted RBP6.39□□□□□ -1.39
SPG11-213ENST00000558988 GPRIN2O60269 458 aa6.39□□□□□ -1.39
SPG11-213ENST00000558988 SERPINI2O75830 405 aa6.39□□□□□ -1.39
SPG11-213ENST00000558988 SEC14L2O76054 403 aa6.39□□□□□ -1.39
SPG11-213ENST00000558988 GUSBP08236 651 aa6.39□□□□□ -1.39
SPG11-213ENST00000558988 TFPTP0C1Z6 253 aa6.39□□□□□ -1.39
SPG11-213ENST00000558988 FKBP2P26885 142 aaKnown RBP6.39□□□□□ -1.39
SPG11-213ENST00000558988 MPGP29372 298 aa6.39□□□□□ -1.39
SPG11-213ENST00000558988 TTKP33981 857 aa6.39□□□□□ -1.39
SPG11-213ENST00000558988 CAPZA2P47755 286 aa6.39□□□□□ -1.39
SPG11-213ENST00000558988 MVDP53602 400 aa6.39□□□□□ -1.39
SPG11-213ENST00000558988 NCALDP61601 193 aa6.39□□□□□ -1.39
SPG11-213ENST00000558988 TXNL4AP83876 142 aaKnown RBP6.39□□□□□ -1.39
SPG11-213ENST00000558988 H3F3AP84243 136 aa6.39□□□□□ -1.39
SPG11-213ENST00000558988 C1DQ13901 141 aaKnown RBP6.39□□□□□ -1.39
SPG11-213ENST00000558988 NRF1Q16656 503 aa6.39□□□□□ -1.39
SPG11-213ENST00000558988 GCNT6Q5T4J0 391 aa6.39□□□□□ -1.39
SPG11-213ENST00000558988 RNF220Q5VTB9 566 aa6.39□□□□□ -1.39
SPG11-213ENST00000558988 CARD17Q5XLA6 110 aa6.39□□□□□ -1.39
SPG11-213ENST00000558988 HMBOX1Q6NT76 420 aa6.39□□□□□ -1.39
SPG11-213ENST00000558988 DTX2Q86UW9 622 aa6.39□□□□□ -1.39
SPG11-213ENST00000558988 C10orf53Q8N6V4 93 aa6.39□□□□□ -1.39
SPG11-213ENST00000558988 POMGNT2Q8NAT1 580 aa6.39□□□□□ -1.39
SPG11-213ENST00000558988 LRRC8CQ8TDW0 803 aa6.39□□□□□ -1.39
SPG11-213ENST00000558988 DYDC1Q8WWB3 177 aa6.39□□□□□ -1.39
SPG11-213ENST00000558988 KTI12Q96EK9 354 aaPredicted RBP6.39□□□□□ -1.39
SPG11-213ENST00000558988 MUS81Q96NY9 551 aa6.39□□□□□ -1.39
SPG11-213ENST00000558988 VRK1Q99986 396 aaPredicted RBP6.39□□□□□ -1.39
SPG11-213ENST00000558988 EBF4Q9BQW3 602 aa6.39□□□□□ -1.39
SPG11-213ENST00000558988 MLST8Q9BVC4 326 aa6.39□□□□□ -1.39
SPG11-213ENST00000558988 ARMC7Q9H6L4 198 aa6.39□□□□□ -1.39
SPG11-213ENST00000558988 TMBIM4Q9HC24 238 aa6.39□□□□□ -1.39
SPG11-213ENST00000558988 SLCO1B3Q9NPD5 702 aa6.39□□□□□ -1.39
SPG11-213ENST00000558988 TCF7L2Q9NQB0 619 aa6.39□□□□□ -1.39
SPG11-213ENST00000558988 SDR39U1Q9NRG7 319 aaPredicted RBP6.39□□□□□ -1.39
SPG11-213ENST00000558988 TMEM45AQ9NWC5 275 aa6.39□□□□□ -1.39
SPG11-213ENST00000558988 CCDC167Q9P0B6 97 aa6.39□□□□□ -1.39
SPG11-213ENST00000558988 SEC14L4Q9UDX3 406 aa6.39□□□□□ -1.39
SPG11-213ENST00000558988 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.39□□□□□ -1.39
SPG11-213ENST00000558988 AMDHD2Q9Y303 409 aa6.39□□□□□ -1.39
SPG11-213ENST00000558988 CHD3Q12873 2000 aaKnown RBP6.38□□□□□ -1.39
SPG11-213ENST00000558988 ABCA1O95477 2261 aa6.38□□□□□ -1.39
SPG11-213ENST00000558988 JMJD1CQ15652 2540 aa6.38□□□□□ -1.39
SPG11-213ENST00000558988 A0A0G2JPF8 293 aa6.38□□□□□ -1.39
SPG11-213ENST00000558988 HNRNPCL2B2RXH8 293 aa6.38□□□□□ -1.39
SPG11-213ENST00000558988 HNRNPCL3B7ZW38 293 aa6.38□□□□□ -1.39
SPG11-213ENST00000558988 FAAHO00519 579 aa6.38□□□□□ -1.39
SPG11-213ENST00000558988 HNRNPCL1O60812 293 aaKnown RBP6.38□□□□□ -1.39
SPG11-213ENST00000558988 CRLF1O75462 422 aa6.38□□□□□ -1.39
SPG11-213ENST00000558988 UPK3AO75631 287 aa6.38□□□□□ -1.39
SPG11-213ENST00000558988 ZCCHC18P0CG32 403 aa6.38□□□□□ -1.39
SPG11-213ENST00000558988 HNRNPCL4P0DMR1 293 aa6.38□□□□□ -1.39
SPG11-213ENST00000558988 PNMTP11086 282 aa6.38□□□□□ -1.39
SPG11-213ENST00000558988 NQO1P15559 274 aaKnown RBP6.38□□□□□ -1.39
SPG11-213ENST00000558988 CLDN17P56750 224 aa6.38□□□□□ -1.39
SPG11-213ENST00000558988 ROR2Q01974 943 aaKnown RBP6.38□□□□□ -1.39
SPG11-213ENST00000558988 CHRNB3Q05901 458 aa6.38□□□□□ -1.39
SPG11-213ENST00000558988 NPRL3Q12980 569 aa6.38□□□□□ -1.39
SPG11-213ENST00000558988 GGTLC2Q14390 218 aa6.38□□□□□ -1.39
SPG11-213ENST00000558988 RGNQ15493 299 aa6.38□□□□□ -1.39
SPG11-213ENST00000558988 TBRG1Q3YBR2 411 aa6.38□□□□□ -1.39
SPG11-213ENST00000558988 AGKQ53H12 422 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms