RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 RIPPLY3P57055 190 aa10.5□□□□□ -0.73
TPM1-216ENST00000558910 PRPS1P60891 318 aa10.5□□□□□ -0.73
TPM1-216ENST00000558910 PSME3P61289 254 aa10.5□□□□□ -0.73
TPM1-216ENST00000558910 RPS4XP62701 263 aaKnown RBP10.5□□□□□ -0.73
TPM1-216ENST00000558910 C5orf46Q6UWT4 87 aa10.5□□□□□ -0.73
TPM1-216ENST00000558910 B3GLCTQ6Y288 498 aa10.5□□□□□ -0.73
TPM1-216ENST00000558910 FKBP9P1Q75LS8 142 aa10.5□□□□□ -0.73
TPM1-216ENST00000558910 ABHD12BQ7Z5M8 362 aaPredicted RBP10.5□□□□□ -0.73
TPM1-216ENST00000558910 P2RY8Q86VZ1 359 aa10.5□□□□□ -0.73
TPM1-216ENST00000558910 KRTAP1-3Q8IUG1 177 aa10.5□□□□□ -0.73
TPM1-216ENST00000558910 ZNF611Q8N823 705 aa10.5□□□□□ -0.73
TPM1-216ENST00000558910 FAM156AQ8NDB6 213 aa10.5□□□□□ -0.73
TPM1-216ENST00000558910 MAPK1IP1LQ8NDC0 245 aa10.5□□□□□ -0.73
TPM1-216ENST00000558910 OR5J2Q8NH18 312 aa10.5□□□□□ -0.73
TPM1-216ENST00000558910 KCTD14Q9BQ13 255 aaPredicted RBP10.5□□□□□ -0.73
TPM1-216ENST00000558910 TMEM43Q9BTV4 400 aa10.5□□□□□ -0.73
TPM1-216ENST00000558910 SEC61A2Q9H9S3 476 aa10.5□□□□□ -0.73
TPM1-216ENST00000558910 GPR35Q9HC97 309 aa10.5□□□□□ -0.73
TPM1-216ENST00000558910 NANSQ9NR45 359 aa10.5□□□□□ -0.73
TPM1-216ENST00000558910 RIMS3Q9UJD0 308 aa10.5□□□□□ -0.73
TPM1-216ENST00000558910 MOKQ9UQ07 419 aa10.5□□□□□ -0.73
TPM1-216ENST00000558910 B3GALT5Q9Y2C3 310 aa10.5□□□□□ -0.73
TPM1-216ENST00000558910 AMDHD2Q9Y303 409 aa10.5□□□□□ -0.73
TPM1-216ENST00000558910 SNX13Q9Y5W8 968 aa10.5□□□□□ -0.73
TPM1-216ENST00000558910 SETD2Q9BYW2 2564 aaPredicted RBP10.49□□□□□ -0.73
TPM1-216ENST00000558910 E7EQL1 145 aa10.49□□□□□ -0.73
TPM1-216ENST00000558910 H7C1Q1 480 aa10.49□□□□□ -0.73
TPM1-216ENST00000558910 SLC22A2O15244 555 aa10.49□□□□□ -0.73
TPM1-216ENST00000558910 AKAP8O43823 692 aaKnown RBP10.49□□□□□ -0.73
TPM1-216ENST00000558910 SNX3O60493 162 aa10.49□□□□□ -0.73
TPM1-216ENST00000558910 FMO6PO60774 539 aa10.49□□□□□ -0.73
TPM1-216ENST00000558910 F13BP05160 661 aa10.49□□□□□ -0.73
TPM1-216ENST00000558910 CELA3BP08861 270 aa10.49□□□□□ -0.73
TPM1-216ENST00000558910 CD79AP11912 226 aa10.49□□□□□ -0.73
TPM1-216ENST00000558910 MSX2P35548 267 aaPredicted RBP10.49□□□□□ -0.73
TPM1-216ENST00000558910 MXRA7P84157 204 aa10.49□□□□□ -0.73
TPM1-216ENST00000558910 MYBPC1Q00872 1141 aa10.49□□□□□ -0.73
TPM1-216ENST00000558910 PIGFQ07326 219 aa10.49□□□□□ -0.73
TPM1-216ENST00000558910 VEZF1Q14119 521 aa10.49□□□□□ -0.73
TPM1-216ENST00000558910 MFSD13AQ14CX5 517 aa10.49□□□□□ -0.73
TPM1-216ENST00000558910 ZNF74Q16587 644 aa10.49□□□□□ -0.73
TPM1-216ENST00000558910 PGGHGQ32M88 737 aa10.49□□□□□ -0.73
TPM1-216ENST00000558910 SLC35D2Q76EJ3 337 aa10.49□□□□□ -0.73
TPM1-216ENST00000558910 NANOGNBQ7Z5D8 188 aa10.49□□□□□ -0.73
TPM1-216ENST00000558910 CIARTQ8N365 385 aaPredicted RBP10.49□□□□□ -0.73
TPM1-216ENST00000558910 PIK3C3Q8NEB9 887 aa10.49□□□□□ -0.73
TPM1-216ENST00000558910 BCL2L2Q92843 193 aaPredicted RBP10.49□□□□□ -0.73
TPM1-216ENST00000558910 CMTM5Q96DZ9 223 aa10.49□□□□□ -0.73
TPM1-216ENST00000558910 KCNS3Q9BQ31 491 aa10.49□□□□□ -0.73
TPM1-216ENST00000558910 PRSS27Q9BQR3 290 aa10.49□□□□□ -0.73
TPM1-216ENST00000558910 C20orf141Q9NUB4 165 aa10.49□□□□□ -0.73
TPM1-216ENST00000558910 MRPL39Q9NYK5 338 aaKnown RBP10.49□□□□□ -0.73
TPM1-216ENST00000558910 POFUT2Q9Y2G5 429 aa10.49□□□□□ -0.73
TPM1-216ENST00000558910 CORINQ9Y5Q5 1042 aa10.49□□□□□ -0.73
TPM1-216ENST00000558910 ALPK2Q86TB3 2170 aa10.49□□□□□ -0.73
TPM1-216ENST00000558910 IGHV1-18A0A0C4DH31 117 aa10.48□□□□□ -0.73
TPM1-216ENST00000558910 MCIDASD6RGH6 385 aa10.48□□□□□ -0.73
TPM1-216ENST00000558910 FAM229AH3BQW9 127 aa10.48□□□□□ -0.73
TPM1-216ENST00000558910 ZNF432O94892 652 aa10.48□□□□□ -0.73
TPM1-216ENST00000558910 PTAFRP25105 342 aa10.48□□□□□ -0.73
TPM1-216ENST00000558910 AQP2P41181 271 aa10.48□□□□□ -0.73
TPM1-216ENST00000558910 CSNK1A1P48729 337 aa10.48□□□□□ -0.73
TPM1-216ENST00000558910 IDH3GP51553 393 aaPredicted RBP10.48□□□□□ -0.73
TPM1-216ENST00000558910 TOP3AQ13472 1001 aaPredicted RBP10.48□□□□□ -0.73
TPM1-216ENST00000558910 ARPINQ7Z6K5 226 aa10.48□□□□□ -0.73
TPM1-216ENST00000558910 IGFN1Q86VF2 1251 aa10.48□□□□□ -0.73
TPM1-216ENST00000558910 TMEM239Q8WW34 195 aa10.48□□□□□ -0.73
TPM1-216ENST00000558910 LZICQ8WZA0 190 aa10.48□□□□□ -0.73
TPM1-216ENST00000558910 FBXO17Q96EF6 278 aa10.48□□□□□ -0.73
TPM1-216ENST00000558910 SGTBQ96EQ0 304 aa10.48□□□□□ -0.73
TPM1-216ENST00000558910 HOPXQ9BPY8 73 aaPredicted RBP10.48□□□□□ -0.73
TPM1-216ENST00000558910 ULBP2Q9BZM5 246 aa10.48□□□□□ -0.73
TPM1-216ENST00000558910 AMBRA1Q9C0C7 1298 aa10.48□□□□□ -0.73
TPM1-216ENST00000558910 MYLK2Q9H1R3 596 aa10.48□□□□□ -0.73
TPM1-216ENST00000558910 EVA1AQ9H8M9 152 aa10.48□□□□□ -0.73
TPM1-216ENST00000558910 B3GAT2Q9NPZ5 323 aa10.48□□□□□ -0.73
TPM1-216ENST00000558910 MEPEQ9NQ76 525 aaPredicted RBP10.48□□□□□ -0.73
TPM1-216ENST00000558910 TAS2R5Q9NYW4 299 aa10.48□□□□□ -0.73
TPM1-216ENST00000558910 PRDM4Q9UKN5 801 aa10.48□□□□□ -0.73
TPM1-216ENST00000558910 NOX1Q9Y5S8 564 aa10.48□□□□□ -0.73
TPM1-216ENST00000558910 ZNF503-AS2A6NEH8 195 aa10.47□□□□□ -0.73
TPM1-216ENST00000558910 OR7A10O76100 309 aa10.47□□□□□ -0.73
TPM1-216ENST00000558910 OR5F1O95221 314 aa10.47□□□□□ -0.73
TPM1-216ENST00000558910 MT-ATP6P00846 226 aa10.47□□□□□ -0.73
TPM1-216ENST00000558910 HLA-HP01893 362 aa10.47□□□□□ -0.73
TPM1-216ENST00000558910 IFNW1P05000 195 aa10.47□□□□□ -0.73
TPM1-216ENST00000558910 DANCRP0C864 163 aa10.47□□□□□ -0.73
TPM1-216ENST00000558910 PATE4P0C8F1 98 aa10.47□□□□□ -0.73
TPM1-216ENST00000558910 IFI30P13284 250 aa10.47□□□□□ -0.73
TPM1-216ENST00000558910 B4GALT1P15291 398 aa10.47□□□□□ -0.73
TPM1-216ENST00000558910 SELENOWP63302 87 aa10.47□□□□□ -0.73
TPM1-216ENST00000558910 SHEQ5VZ18 495 aa10.47□□□□□ -0.73
TPM1-216ENST00000558910 ANKRD16Q6P6B7 361 aa10.47□□□□□ -0.73
TPM1-216ENST00000558910 ZNF813Q6ZN06 617 aa10.47□□□□□ -0.73
TPM1-216ENST00000558910 SLC46A3Q7Z3Q1 461 aa10.47□□□□□ -0.73
TPM1-216ENST00000558910 MYPOPQ86VE0 399 aaPredicted RBP10.47□□□□□ -0.73
TPM1-216ENST00000558910 C20orf196Q8IYI0 205 aa10.47□□□□□ -0.73
TPM1-216ENST00000558910 TMEM123Q8N131 208 aa10.47□□□□□ -0.73
TPM1-216ENST00000558910 FBXL14Q8N1E6 418 aa10.47□□□□□ -0.73
TPM1-216ENST00000558910 C17orf78Q8N4C9 275 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms