RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 CCDC36Q8IYA8 594 aa14.76□□□□□ -0.05
LRRC28-210ENST00000558879 C10orf53Q8N6V4 93 aa14.76□□□□□ -0.05
LRRC28-210ENST00000558879 OR4F15Q8NGB8 312 aa14.76□□□□□ -0.05
LRRC28-210ENST00000558879 C10orf82Q8WW14 230 aa14.76□□□□□ -0.05
LRRC28-210ENST00000558879 SORCS2Q96PQ0 1159 aa14.76□□□□□ -0.05
LRRC28-210ENST00000558879 ECSITQ9BQ95 431 aa14.76□□□□□ -0.05
LRRC28-210ENST00000558879 POLR2J2Q9GZM3 115 aaKnown RBP14.76□□□□□ -0.05
LRRC28-210ENST00000558879 POLR2J3Q9H1A7 115 aaKnown RBP14.76□□□□□ -0.05
LRRC28-210ENST00000558879 ZNF442Q9H7R0 627 aa14.76□□□□□ -0.05
LRRC28-210ENST00000558879 NOX3Q9HBY0 568 aa14.76□□□□□ -0.05
LRRC28-210ENST00000558879 MEPEQ9NQ76 525 aaPredicted RBP14.76□□□□□ -0.05
LRRC28-210ENST00000558879 B3GNT2Q9NY97 397 aa14.76□□□□□ -0.05
LRRC28-210ENST00000558879 TAS2R5Q9NYW4 299 aa14.76□□□□□ -0.05
LRRC28-210ENST00000558879 ZNF229Q9UJW7 825 aa14.76□□□□□ -0.05
LRRC28-210ENST00000558879 PMF1-BGLAPU3KQ54 211 aa14.76□□□□□ -0.05
LRRC28-210ENST00000558879 RTTNQ86VV8 2226 aa14.76□□□□□ -0.05
LRRC28-210ENST00000558879 IGHV2OR16-5A0A0B4J2B6 119 aa14.75□□□□□ -0.05
LRRC28-210ENST00000558879 C11orf98E9PRG8 122 aa14.75□□□□□ -0.05
LRRC28-210ENST00000558879 SLC22A2O15244 555 aa14.75□□□□□ -0.05
LRRC28-210ENST00000558879 CD5LO43866 347 aa14.75□□□□□ -0.05
LRRC28-210ENST00000558879 IGF2P01344 180 aa14.75□□□□□ -0.05
LRRC28-210ENST00000558879 CSF3P09919 207 aa14.75□□□□□ -0.05
LRRC28-210ENST00000558879 SLC25A16P16260 332 aa14.75□□□□□ -0.05
LRRC28-210ENST00000558879 GUCY1A3Q02108 690 aa14.75□□□□□ -0.05
LRRC28-210ENST00000558879 HGFACQ04756 655 aa14.75□□□□□ -0.05
LRRC28-210ENST00000558879 CARM1Q86X55 608 aa14.75□□□□□ -0.05
LRRC28-210ENST00000558879 C10orf105Q8TEF2 133 aa14.75□□□□□ -0.05
LRRC28-210ENST00000558879 PROX1Q92786 737 aa14.75□□□□□ -0.05
LRRC28-210ENST00000558879 TMEM54Q969K7 222 aa14.75□□□□□ -0.05
LRRC28-210ENST00000558879 FBXO17Q96EF6 278 aa14.75□□□□□ -0.05
LRRC28-210ENST00000558879 FOXB1Q99853 325 aa14.75□□□□□ -0.05
LRRC28-210ENST00000558879 ULBP2Q9BZM5 246 aa14.75□□□□□ -0.05
LRRC28-210ENST00000558879 B3GAT2Q9NPZ5 323 aa14.75□□□□□ -0.05
LRRC28-210ENST00000558879 NANSQ9NR45 359 aa14.75□□□□□ -0.05
LRRC28-210ENST00000558879 BAG5Q9UL15 447 aa14.75□□□□□ -0.05
LRRC28-210ENST00000558879 CAPN7Q9Y6W3 813 aa14.75□□□□□ -0.05
LRRC28-210ENST00000558879 ANK3Q12955 4377 aaKnown RBP14.75□□□□□ -0.05
LRRC28-210ENST00000558879 B9A039 149 aa14.74□□□□□ -0.05
LRRC28-210ENST00000558879 KPNA4O00629 521 aaPredicted RBP14.74□□□□□ -0.05
LRRC28-210ENST00000558879 CH25HO95992 272 aa14.74□□□□□ -0.05
LRRC28-210ENST00000558879 VIMP08670 466 aaKnown RBP14.74□□□□□ -0.05
LRRC28-210ENST00000558879 IFNGR1P15260 489 aa14.74□□□□□ -0.05
LRRC28-210ENST00000558879 B4GALT1P15291 398 aa14.74□□□□□ -0.05
LRRC28-210ENST00000558879 TNFRSF1BP20333 461 aa14.74□□□□□ -0.05
LRRC28-210ENST00000558879 AHCYP23526 432 aa14.74□□□□□ -0.05
LRRC28-210ENST00000558879 SERPINF1P36955 418 aa14.74□□□□□ -0.05
LRRC28-210ENST00000558879 BIDP55957 195 aa14.74□□□□□ -0.05
LRRC28-210ENST00000558879 SNRPD2P62316 118 aaKnown RBP14.74□□□□□ -0.05
LRRC28-210ENST00000558879 LOXL1Q08397 574 aaPredicted RBP14.74□□□□□ -0.05
LRRC28-210ENST00000558879 SF3A3Q12874 501 aaKnown RBP eCLIP14.74□□□□□ -0.05
LRRC28-210ENST00000558879 ZNF813Q6ZN06 617 aa14.74□□□□□ -0.05
LRRC28-210ENST00000558879 SLC35D2Q76EJ3 337 aa14.74□□□□□ -0.05
LRRC28-210ENST00000558879 LRRC17Q8N6Y2 441 aa14.74□□□□□ -0.05
LRRC28-210ENST00000558879 PCYOX1LQ8NBM8 494 aa14.74□□□□□ -0.05
LRRC28-210ENST00000558879 OR6X1Q8NH79 312 aa14.74□□□□□ -0.05
LRRC28-210ENST00000558879 NANOS1Q8WY41 292 aaKnown RBP14.74□□□□□ -0.05
LRRC28-210ENST00000558879 FAM168AQ92567 244 aa14.74□□□□□ -0.05
LRRC28-210ENST00000558879 PLK3Q9H4B4 646 aa14.74□□□□□ -0.05
LRRC28-210ENST00000558879 ADAM21Q9UKJ8 722 aa14.74□□□□□ -0.05
LRRC28-210ENST00000558879 SH3GLB1Q9Y371 365 aa14.74□□□□□ -0.05
LRRC28-210ENST00000558879 LOC100653049A0A140TA62 436 aa14.73□□□□□ -0.05
LRRC28-210ENST00000558879 ZNF726A6NNF4 738 aa14.73□□□□□ -0.05
LRRC28-210ENST00000558879 TLX2O43763 284 aaPredicted RBP14.73□□□□□ -0.05
LRRC28-210ENST00000558879 CRLF1O75462 422 aa14.73□□□□□ -0.05
LRRC28-210ENST00000558879 SERPINI2O75830 405 aa14.73□□□□□ -0.05
LRRC28-210ENST00000558879 KRT34O76011 436 aa14.73□□□□□ -0.05
LRRC28-210ENST00000558879 LY6HO94772 140 aa14.73□□□□□ -0.05
LRRC28-210ENST00000558879 OR5F1O95221 314 aa14.73□□□□□ -0.05
LRRC28-210ENST00000558879 F12P00748 615 aaPredicted RBP14.73□□□□□ -0.05
LRRC28-210ENST00000558879 HLA-HP01893 362 aa14.73□□□□□ -0.05
LRRC28-210ENST00000558879 MT-ND1P03886 318 aa14.73□□□□□ -0.05
LRRC28-210ENST00000558879 TSPAN19P0C672 248 aa14.73□□□□□ -0.05
LRRC28-210ENST00000558879 ZNF14P17017 642 aaPredicted RBP14.73□□□□□ -0.05
LRRC28-210ENST00000558879 RBM34P42696 430 aaKnown RBP14.73□□□□□ -0.05
LRRC28-210ENST00000558879 CSNK1A1P48729 337 aa14.73□□□□□ -0.05
LRRC28-210ENST00000558879 PPOXP50336 477 aa14.73□□□□□ -0.05
LRRC28-210ENST00000558879 UGT2B15P54855 530 aa14.73□□□□□ -0.05
LRRC28-210ENST00000558879 NPRL3Q12980 569 aa14.73□□□□□ -0.05
LRRC28-210ENST00000558879 MELKQ14680 651 aa14.73□□□□□ -0.05
LRRC28-210ENST00000558879 GSG1Q2KHT4 349 aa14.73□□□□□ -0.05
LRRC28-210ENST00000558879 NKAIN4Q8IVV8 208 aa14.73□□□□□ -0.05
LRRC28-210ENST00000558879 OR6N1Q8NGY5 312 aa14.73□□□□□ -0.05
LRRC28-210ENST00000558879 GID8Q9NWU2 228 aa14.73□□□□□ -0.05
LRRC28-210ENST00000558879 FKBP7Q9Y680 259 aa14.73□□□□□ -0.05
LRRC28-210ENST00000558879 VWC2LB2RUY7 222 aa14.72□□□□□ -0.05
LRRC28-210ENST00000558879 OR6A2O95222 327 aa14.72□□□□□ -0.05
LRRC28-210ENST00000558879 OR4A8P0C604 315 aa14.72□□□□□ -0.05
LRRC28-210ENST00000558879 PGA4P0DJD7 388 aa14.72□□□□□ -0.05
LRRC28-210ENST00000558879 PGA3P0DJD8 388 aa14.72□□□□□ -0.05
LRRC28-210ENST00000558879 VLDLRP98155 873 aa14.72□□□□□ -0.05
LRRC28-210ENST00000558879 TMEM249Q2WGJ8 235 aa14.72□□□□□ -0.05
LRRC28-210ENST00000558879 LRRC23Q53EV4 343 aaPredicted RBP14.72□□□□□ -0.05
LRRC28-210ENST00000558879 DEF8Q6ZN54 512 aa14.72□□□□□ -0.05
LRRC28-210ENST00000558879 NANOGNBQ7Z5D8 188 aa14.72□□□□□ -0.05
LRRC28-210ENST00000558879 MICU2Q8IYU8 434 aa14.72□□□□□ -0.05
LRRC28-210ENST00000558879 IL17RDQ8NFM7 739 aa14.72□□□□□ -0.05
LRRC28-210ENST00000558879 OR2T12Q8NG77 320 aa14.72□□□□□ -0.05
LRRC28-210ENST00000558879 PFN4Q8NHR9 129 aa14.72□□□□□ -0.05
LRRC28-210ENST00000558879 TMEM255BQ8WV15 326 aa14.72□□□□□ -0.05
LRRC28-210ENST00000558879 LIPHQ8WWY8 451 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms