RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 SH3GLB1Q9Y371 365 aa13.32□□□□□ -0.28
RPL28-206ENST00000558752 LOC100289279A0A1B0GTE1 492 aa13.31□□□□□ -0.28
RPL28-206ENST00000558752 A0A1W2PR80 420 aa13.31□□□□□ -0.28
RPL28-206ENST00000558752 CPSF4LA6NMK7 179 aaKnown RBP13.31□□□□□ -0.28
RPL28-206ENST00000558752 SNX3O60493 162 aa13.31□□□□□ -0.28
RPL28-206ENST00000558752 HIST1H2ABP04908 130 aa13.31□□□□□ -0.28
RPL28-206ENST00000558752 IGHV4-31P0DP07 118 aa13.31□□□□□ -0.28
RPL28-206ENST00000558752 NQO1P15559 274 aaKnown RBP13.31□□□□□ -0.28
RPL28-206ENST00000558752 LSP1P33241 339 aa13.31□□□□□ -0.28
RPL28-206ENST00000558752 SELENOPP49908 381 aa13.31□□□□□ -0.28
RPL28-206ENST00000558752 CRYBA2P53672 197 aa13.31□□□□□ -0.28
RPL28-206ENST00000558752 SEC24CP53992 1094 aa13.31□□□□□ -0.28
RPL28-206ENST00000558752 CLDN17P56750 224 aa13.31□□□□□ -0.28
RPL28-206ENST00000558752 SNRPD2P62316 118 aaKnown RBP13.31□□□□□ -0.28
RPL28-206ENST00000558752 SPOCK1Q08629 439 aa13.31□□□□□ -0.28
RPL28-206ENST00000558752 ZP4Q12836 540 aa13.31□□□□□ -0.28
RPL28-206ENST00000558752 KRTAP24-1Q3LI83 254 aa13.31□□□□□ -0.28
RPL28-206ENST00000558752 HIST3H2AQ7L7L0 130 aa13.31□□□□□ -0.28
RPL28-206ENST00000558752 CARM1Q86X55 608 aa13.31□□□□□ -0.28
RPL28-206ENST00000558752 SLC15A3Q8IY34 581 aa13.31□□□□□ -0.28
RPL28-206ENST00000558752 CCDC36Q8IYA8 594 aa13.31□□□□□ -0.28
RPL28-206ENST00000558752 C10orf53Q8N6V4 93 aa13.31□□□□□ -0.28
RPL28-206ENST00000558752 POU5F2Q8N7G0 328 aa13.31□□□□□ -0.28
RPL28-206ENST00000558752 WDR31Q8NA23 367 aa13.31□□□□□ -0.28
RPL28-206ENST00000558752 OR5J2Q8NH18 312 aa13.31□□□□□ -0.28
RPL28-206ENST00000558752 VANGL1Q8TAA9 524 aaPredicted RBP13.31□□□□□ -0.28
RPL28-206ENST00000558752 HIST1H2ACQ93077 130 aa13.31□□□□□ -0.28
RPL28-206ENST00000558752 ZNF426Q9BUY5 554 aa13.31□□□□□ -0.28
RPL28-206ENST00000558752 C19orf24Q9BVV8 132 aa13.31□□□□□ -0.28
RPL28-206ENST00000558752 MYLK2Q9H1R3 596 aa13.31□□□□□ -0.28
RPL28-206ENST00000558752 VSTM5A8MXK1 200 aa13.3□□□□□ -0.28
RPL28-206ENST00000558752 PLPP3O14495 311 aa13.3□□□□□ -0.28
RPL28-206ENST00000558752 OR5F1O95221 314 aa13.3□□□□□ -0.28
RPL28-206ENST00000558752 OR6A2O95222 327 aa13.3□□□□□ -0.28
RPL28-206ENST00000558752 APEHP13798 732 aaKnown RBP13.3□□□□□ -0.28
RPL28-206ENST00000558752 DRD4P21917 467 aa13.3□□□□□ -0.28
RPL28-206ENST00000558752 RBM34P42696 430 aaKnown RBP13.3□□□□□ -0.28
RPL28-206ENST00000558752 IL1RL1Q01638 556 aa13.3□□□□□ -0.28
RPL28-206ENST00000558752 PUDPQ08623 228 aa13.3□□□□□ -0.28
RPL28-206ENST00000558752 GGTLC2Q14390 218 aa13.3□□□□□ -0.28
RPL28-206ENST00000558752 C3orf36Q3SXR2 165 aa13.3□□□□□ -0.28
RPL28-206ENST00000558752 CYBRD1Q53TN4 286 aa13.3□□□□□ -0.28
RPL28-206ENST00000558752 C8orf82Q6P1X6 216 aaPredicted RBP13.3□□□□□ -0.28
RPL28-206ENST00000558752 ANKRD16Q6P6B7 361 aa13.3□□□□□ -0.28
RPL28-206ENST00000558752 B3GLCTQ6Y288 498 aa13.3□□□□□ -0.28
RPL28-206ENST00000558752 RBM45Q8IUH3 476 aaKnown RBP13.3□□□□□ -0.28
RPL28-206ENST00000558752 GPR137CQ8N3F9 429 aa13.3□□□□□ -0.28
RPL28-206ENST00000558752 FAM169BQ8N8A8 192 aa13.3□□□□□ -0.28
RPL28-206ENST00000558752 OR4D11Q8NGI4 311 aa13.3□□□□□ -0.28
RPL28-206ENST00000558752 HTRA1Q92743 480 aa13.3□□□□□ -0.28
RPL28-206ENST00000558752 FBXO17Q96EF6 278 aa13.3□□□□□ -0.28
RPL28-206ENST00000558752 C1QTNF6Q9BXI9 259 aa13.3□□□□□ -0.28
RPL28-206ENST00000558752 CHODLQ9H9P2 273 aa13.3□□□□□ -0.28
RPL28-206ENST00000558752 NANSQ9NR45 359 aa13.3□□□□□ -0.28
RPL28-206ENST00000558752 CMTM6Q9NX76 183 aa13.3□□□□□ -0.28
RPL28-206ENST00000558752 RIMS3Q9UJD0 308 aa13.3□□□□□ -0.28
RPL28-206ENST00000558752 ZNF229Q9UJW7 825 aa13.3□□□□□ -0.28
RPL28-206ENST00000558752 SLC7A7Q9UM01 511 aa13.3□□□□□ -0.28
RPL28-206ENST00000558752 ANK2Q01484 3957 aa13.3□□□□□ -0.28
RPL28-206ENST00000558752 YLPM1P49750 1951 aaKnown RBP13.29□□□□□ -0.28
RPL28-206ENST00000558752 LOC390937A0A1W2PQ73 354 aa13.29□□□□□ -0.28
RPL28-206ENST00000558752 ZNF726A6NNF4 738 aa13.29□□□□□ -0.28
RPL28-206ENST00000558752 LYPD3O95274 346 aa13.29□□□□□ -0.28
RPL28-206ENST00000558752 FOXG1P55316 489 aaPredicted RBP13.29□□□□□ -0.28
RPL28-206ENST00000558752 TAS2R41P59536 307 aa13.29□□□□□ -0.28
RPL28-206ENST00000558752 UBE2NP61088 152 aaKnown RBP13.29□□□□□ -0.28
RPL28-206ENST00000558752 LIPEQ05469 1076 aa13.29□□□□□ -0.28
RPL28-206ENST00000558752 ZNF74Q16587 644 aa13.29□□□□□ -0.28
RPL28-206ENST00000558752 IQCCQ4KMZ1 466 aa13.29□□□□□ -0.28
RPL28-206ENST00000558752 FAM120AOSQ5T036 256 aa13.29□□□□□ -0.28
RPL28-206ENST00000558752 NHLRC1Q6VVB1 395 aa13.29□□□□□ -0.28
RPL28-206ENST00000558752 OR1K1Q8NGR3 316 aa13.29□□□□□ -0.28
RPL28-206ENST00000558752 BCL2L2Q92843 193 aaPredicted RBP13.29□□□□□ -0.28
RPL28-206ENST00000558752 MOGAT1Q96PD6 335 aa13.29□□□□□ -0.28
RPL28-206ENST00000558752 B3GAT2Q9NPZ5 323 aa13.29□□□□□ -0.28
RPL28-206ENST00000558752 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.29□□□□□ -0.289e-9■■■■□ 21.2
RPL28-206ENST00000558752 ARPC4-TTLL3A0A0A6YYG9 625 aa13.28□□□□□ -0.28
RPL28-206ENST00000558752 GSTA4O15217 222 aa13.28□□□□□ -0.28
RPL28-206ENST00000558752 TRAF3IP2O43734 574 aaPredicted RBP13.28□□□□□ -0.28
RPL28-206ENST00000558752 UPK3AO75631 287 aa13.28□□□□□ -0.28
RPL28-206ENST00000558752 THY1P04216 161 aa13.28□□□□□ -0.28
RPL28-206ENST00000558752 ERCC1P07992 297 aaPredicted RBP13.28□□□□□ -0.28
RPL28-206ENST00000558752 CBLP22681 906 aa13.28□□□□□ -0.28
RPL28-206ENST00000558752 AHCYP23526 432 aa13.28□□□□□ -0.28
RPL28-206ENST00000558752 IGFBP5P24593 272 aa13.28□□□□□ -0.28
RPL28-206ENST00000558752 NR4A2P43354 598 aa13.28□□□□□ -0.28
RPL28-206ENST00000558752 ROR2Q01974 943 aaKnown RBP13.28□□□□□ -0.28
RPL28-206ENST00000558752 ST3GAL3Q11203 375 aa13.28□□□□□ -0.28
RPL28-206ENST00000558752 C9orf135Q5VTT2 229 aa13.28□□□□□ -0.28
RPL28-206ENST00000558752 TREML1Q86YW5 311 aa13.28□□□□□ -0.28
RPL28-206ENST00000558752 C20orf196Q8IYI0 205 aa13.28□□□□□ -0.28
RPL28-206ENST00000558752 OR2M2Q96R28 347 aa13.28□□□□□ -0.28
RPL28-206ENST00000558752 PRSS27Q9BQR3 290 aa13.28□□□□□ -0.28
RPL28-206ENST00000558752 SEC14L4Q9UDX3 406 aa13.28□□□□□ -0.28
RPL28-206ENST00000558752 SLC35F4A4IF30 521 aa13.27□□□□□ -0.29
RPL28-206ENST00000558752 VWC2LB2RUY7 222 aa13.27□□□□□ -0.29
RPL28-206ENST00000558752 B9A039 149 aa13.27□□□□□ -0.29
RPL28-206ENST00000558752 DYNC1I1O14576 645 aa13.27□□□□□ -0.29
RPL28-206ENST00000558752 ENTPD5O75356 428 aa13.27□□□□□ -0.29
RPL28-206ENST00000558752 GMNNO75496 209 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms