RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 MORN5Q5VZ52 161 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 AP1ARQ63HQ0 302 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 ZNF836Q6ZNA1 936 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 FAM57BQ71RH2 274 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 ZNF550Q7Z398 422 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 RBM45Q8IUH3 476 aaKnown RBP3.75□□□□□ -1.81
SPG11-211ENST00000558561 LURAP1LQ8IV03 231 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 LACC1Q8IV20 430 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 TUSC5Q8IXB3 177 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 DND1Q8IYX4 353 aaKnown RBP3.75□□□□□ -1.81
SPG11-211ENST00000558561 KDM8Q8N371 416 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 GTPBP8Q8N3Z3 284 aaPredicted RBP3.75□□□□□ -1.81
SPG11-211ENST00000558561 ADPRHL1Q8NDY3 354 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 OR10D3Q8NH80 312 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 PRSS3P2Q8NHM4 247 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 RAB3IL1Q8TBN0 382 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 MIPOL1Q8TD10 442 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 SFXN5Q8TD22 340 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 DYDC1Q8WWB3 177 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 SPDL1Q96EA4 605 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 TMEM19Q96HH6 336 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 ADAD1Q96M93 576 aaKnown RBP3.75□□□□□ -1.81
SPG11-211ENST00000558561 WFIKKN1Q96NZ8 548 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 ZNF317Q96PQ6 595 aaPredicted RBP3.75□□□□□ -1.81
SPG11-211ENST00000558561 ZNF300Q96RE9 604 aaPredicted RBP3.75□□□□□ -1.81
SPG11-211ENST00000558561 TREX2Q9BQ50 279 aaPredicted RBP3.75□□□□□ -1.81
SPG11-211ENST00000558561 SLC39A3Q9BRY0 314 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 CCDC28BQ9BUN5 200 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 HDHD5Q9BXW7 423 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 ZNF350Q9GZX5 532 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 LAT2Q9GZY6 243 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 COQ10BQ9H8M1 238 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 CALHM2Q9HA72 323 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 PLEKHA2Q9HB19 425 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 G6PC2Q9NQR9 355 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 SDHAF3Q9NRP4 125 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 ATAD3AQ9NVI7 634 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 TMEM45AQ9NWC5 275 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 ARMCX1Q9P291 453 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 PCDHGB4Q9UN71 923 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 L3MBTL1Q9Y468 752 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 WDR45Q9Y484 360 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 KLF2Q9Y5W3 355 aaPredicted RBP3.75□□□□□ -1.81
SPG11-211ENST00000558561 MAST4O15021 2626 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 VPS13CQ709C8 3753 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 MED13LQ71F56 2210 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 ZNF469Q96JG9 3925 aaPredicted RBP3.75□□□□□ -1.81
SPG11-211ENST00000558561 MYO9AB2RTY4 2548 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 MAP1AP78559 2803 aaPredicted RBP3.74□□□□□ -1.81
SPG11-211ENST00000558561 A0A1W2PNV4 684 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 A0A1W2PQD3 144 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 A8MXE2 369 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 LRRN3E7EW58 273 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 SLCO1B7G3V0H7 640 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 ZNF264O43296 627 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 HNRNPRO43390 633 aaKnown RBP3.74□□□□□ -1.81
SPG11-211ENST00000558561 DSCAMO60469 2012 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 SHOX2O60902 331 aaPredicted RBP3.74□□□□□ -1.81
SPG11-211ENST00000558561 NUDT14O95848 222 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 CSTAP01040 98 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 IGHV3-9P01782 118 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 OPN1SWP03999 348 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 THY1P04216 161 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 IL6P05231 212 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 BCHEP06276 602 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 NGFRP08138 427 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 VIMP08670 466 aaKnown RBP3.74□□□□□ -1.81
SPG11-211ENST00000558561 IFI6P09912 130 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 ZCCHC18P0CG32 403 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 NR2F1P10589 423 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 COX6B1P14854 86 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 GABRA1P14867 456 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 IDO1P14902 403 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 HPGDP15428 266 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 TNFRSF1BP20333 461 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 AGAP20933 346 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 ATP6V1C1P21283 382 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 RPS4Y1P22090 263 aaKnown RBP3.74□□□□□ -1.81
SPG11-211ENST00000558561 CBLP22681 906 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 LOXP28300 417 aaPredicted RBP3.74□□□□□ -1.81
SPG11-211ENST00000558561 AQP1P29972 269 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 RPL3P39023 403 aaKnown RBP3.74□□□□□ -1.81
SPG11-211ENST00000558561 CCR4P51679 360 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 CRYBA2P53672 197 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 CLNS1AP54105 237 aaKnown RBP3.74□□□□□ -1.81
SPG11-211ENST00000558561 CARD18P57730 90 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 MTPNP58546 118 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 EEF1A1P68104 462 aaKnown RBP3.74□□□□□ -1.81
SPG11-211ENST00000558561 DMTNQ08495 405 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 MERTKQ12866 999 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 GUSBP1Q15486 140 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 ETFDHQ16134 617 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 BCL2A1Q16548 175 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 SGCBQ16585 318 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 GSTA3Q16772 222 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 DUSP7Q16829 419 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 EXOC3L2Q2M3D2 409 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 C6orf10Q5SRN2 563 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 MRPL2Q5T653 305 aaKnown RBP3.74□□□□□ -1.81
SPG11-211ENST00000558561 HBMQ6B0K9 141 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms