RNA–Protein interactions for RNA: ENST00000558509.5

IDH3A-205, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 4

Gene IDH3A, Length 617 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-205ENST00000558509 ZNF786Q8N393 782 aa12.79□□□□□ -0.36
IDH3A-205ENST00000558509 SMYD1Q8NB12 490 aa12.79□□□□□ -0.36
IDH3A-205ENST00000558509 SYT3Q9BQG1 590 aa12.79□□□□□ -0.36
IDH3A-205ENST00000558509 RAB1BQ9H0U4 201 aa12.79□□□□□ -0.36
IDH3A-205ENST00000558509 RAD21L1Q9H4I0 556 aa12.79□□□□□ -0.36
IDH3A-205ENST00000558509 CACYBPQ9HB71 228 aaKnown RBP12.79□□□□□ -0.36
IDH3A-205ENST00000558509 DYNLRB1Q9NP97 96 aa12.79□□□□□ -0.36
IDH3A-205ENST00000558509 TESQ9UGI8 421 aaKnown RBP12.79□□□□□ -0.36
IDH3A-205ENST00000558509 USP22Q9UPT9 525 aa12.79□□□□□ -0.36
IDH3A-205ENST00000558509 PLPP3O14495 311 aa12.78□□□□□ -0.36
IDH3A-205ENST00000558509 OR2T1O43869 369 aa12.78□□□□□ -0.36
IDH3A-205ENST00000558509 MFN2O95140 757 aa12.78□□□□□ -0.36
IDH3A-205ENST00000558509 NQO1P15559 274 aaKnown RBP12.78□□□□□ -0.36
IDH3A-205ENST00000558509 CDH15P55291 814 aa12.78□□□□□ -0.36
IDH3A-205ENST00000558509 PCBP3P57721 371 aaKnown RBP12.78□□□□□ -0.36
IDH3A-205ENST00000558509 FXNQ16595 210 aa12.78□□□□□ -0.36
IDH3A-205ENST00000558509 GSG1Q2KHT4 349 aa12.78□□□□□ -0.36
IDH3A-205ENST00000558509 BEND6Q5SZJ8 279 aaPredicted RBP12.78□□□□□ -0.36
IDH3A-205ENST00000558509 FAM91A1Q658Y4 838 aa12.78□□□□□ -0.36
IDH3A-205ENST00000558509 ULK3Q6PHR2 472 aa12.78□□□□□ -0.36
IDH3A-205ENST00000558509 CROCCP2Q86T23 111 aa12.78□□□□□ -0.36
IDH3A-205ENST00000558509 PAQR4Q8N4S7 273 aaPredicted RBP12.78□□□□□ -0.36
IDH3A-205ENST00000558509 RNF217Q8TC41 542 aa12.78□□□□□ -0.36
IDH3A-205ENST00000558509 UBASH3BQ8TF42 649 aa12.78□□□□□ -0.36
IDH3A-205ENST00000558509 DNAJA4Q8WW22 397 aaPredicted RBP12.78□□□□□ -0.36
IDH3A-205ENST00000558509 NEU4Q8WWR8 484 aaPredicted RBP12.78□□□□□ -0.36
IDH3A-205ENST00000558509 YIPF5Q969M3 257 aa12.78□□□□□ -0.36
IDH3A-205ENST00000558509 MRPL24Q96A35 216 aaKnown RBP12.78□□□□□ -0.36
IDH3A-205ENST00000558509 SLC47A1Q96FL8 570 aa12.78□□□□□ -0.36
IDH3A-205ENST00000558509 C7orf26Q96N11 449 aa12.78□□□□□ -0.36
IDH3A-205ENST00000558509 ANKRD27Q96NW4 1050 aa12.78□□□□□ -0.36
IDH3A-205ENST00000558509 MRPL39Q9NYK5 338 aaKnown RBP12.78□□□□□ -0.36
IDH3A-205ENST00000558509 GMEB1Q9Y692 573 aa12.78□□□□□ -0.36
IDH3A-205ENST00000558509 FAM157AC9JC47 383 aa12.77□□□□□ -0.37
IDH3A-205ENST00000558509 C11orf98E9PRG8 122 aa12.77□□□□□ -0.37
IDH3A-205ENST00000558509 POLR3GO15318 223 aaPredicted RBP12.77□□□□□ -0.37
IDH3A-205ENST00000558509 IFNGR1P15260 489 aa12.77□□□□□ -0.37
IDH3A-205ENST00000558509 GPX2P18283 190 aa12.77□□□□□ -0.37
IDH3A-205ENST00000558509 COL8A2P25067 703 aa12.77□□□□□ -0.37
IDH3A-205ENST00000558509 GIPRP48546 466 aa12.77□□□□□ -0.37
IDH3A-205ENST00000558509 PTDSS1P48651 473 aaKnown RBP12.77□□□□□ -0.37
IDH3A-205ENST00000558509 PUDPQ08623 228 aa12.77□□□□□ -0.37
IDH3A-205ENST00000558509 PMS2P3Q13401 168 aa12.77□□□□□ -0.37
IDH3A-205ENST00000558509 MELKQ14680 651 aa12.77□□□□□ -0.37
IDH3A-205ENST00000558509 RAB39AQ14964 217 aa12.77□□□□□ -0.37
IDH3A-205ENST00000558509 AGKQ53H12 422 aa12.77□□□□□ -0.37
IDH3A-205ENST00000558509 C5orf46Q6UWT4 87 aa12.77□□□□□ -0.37
IDH3A-205ENST00000558509 LINC00114Q6XXX2 140 aa12.77□□□□□ -0.37
IDH3A-205ENST00000558509 RETREG3Q86VR2 466 aa12.77□□□□□ -0.37
IDH3A-205ENST00000558509 SKA3Q8IX90 412 aa12.77□□□□□ -0.37
IDH3A-205ENST00000558509 LRRC17Q8N6Y2 441 aa12.77□□□□□ -0.37
IDH3A-205ENST00000558509 SCAIQ8N9R8 606 aa12.77□□□□□ -0.37
IDH3A-205ENST00000558509 OR6T1Q8NGN1 323 aa12.77□□□□□ -0.37
IDH3A-205ENST00000558509 OR6S1Q8NH40 331 aa12.77□□□□□ -0.37
IDH3A-205ENST00000558509 ARHGDIGQ99819 225 aa12.77□□□□□ -0.37
IDH3A-205ENST00000558509 FOXB1Q99853 325 aa12.77□□□□□ -0.37
IDH3A-205ENST00000558509 ULBP2Q9BZM5 246 aa12.77□□□□□ -0.37
IDH3A-205ENST00000558509 TMEM38AQ9H6F2 299 aa12.77□□□□□ -0.37
IDH3A-205ENST00000558509 NARFLQ9H6Q4 476 aa12.77□□□□□ -0.37
IDH3A-205ENST00000558509 CMAHPQ9Y471 501 aa12.77□□□□□ -0.37
IDH3A-205ENST00000558509 PAX7P23759 505 aa12.76□□□□□ -0.37
IDH3A-205ENST00000558509 CHN2P52757 468 aa12.76□□□□□ -0.37
IDH3A-205ENST00000558509 CRYBA2P53672 197 aa12.76□□□□□ -0.37
IDH3A-205ENST00000558509 BIDP55957 195 aa12.76□□□□□ -0.37
IDH3A-205ENST00000558509 MTPNP58546 118 aa12.76□□□□□ -0.37
IDH3A-205ENST00000558509 STX1BP61266 288 aa12.76□□□□□ -0.37
IDH3A-205ENST00000558509 ERVS71-1P61550 626 aa12.76□□□□□ -0.37
IDH3A-205ENST00000558509 DUSP7Q16829 419 aa12.76□□□□□ -0.37
IDH3A-205ENST00000558509 RINLQ6ZS11 566 aa12.76□□□□□ -0.37
IDH3A-205ENST00000558509 NET1Q7Z628 596 aaPredicted RBP12.76□□□□□ -0.37
IDH3A-205ENST00000558509 ARMC8Q8IUR7 673 aa12.76□□□□□ -0.37
IDH3A-205ENST00000558509 HIPK4Q8NE63 616 aa12.76□□□□□ -0.37
IDH3A-205ENST00000558509 CLDND2Q8NHS1 167 aa12.76□□□□□ -0.37
IDH3A-205ENST00000558509 TMEM54Q969K7 222 aa12.76□□□□□ -0.37
IDH3A-205ENST00000558509 THOC1Q96FV9 657 aaKnown RBP12.76□□□□□ -0.37
IDH3A-205ENST00000558509 LRR1Q96L50 414 aa12.76□□□□□ -0.37
IDH3A-205ENST00000558509 TSPAN32Q96QS1 320 aa12.76□□□□□ -0.37
IDH3A-205ENST00000558509 TMEM43Q9BTV4 400 aa12.76□□□□□ -0.37
IDH3A-205ENST00000558509 ASPNQ9BXN1 380 aa12.76□□□□□ -0.37
IDH3A-205ENST00000558509 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.76□□□□□ -0.37
IDH3A-205ENST00000558509 CORINQ9Y5Q5 1042 aa12.76□□□□□ -0.37
IDH3A-205ENST00000558509 CPSF4LA6NMK7 179 aaKnown RBP12.75□□□□□ -0.37
IDH3A-205ENST00000558509 ARHGAP32A7KAX9 2087 aa12.75□□□□□ -0.37
IDH3A-205ENST00000558509 AKAP8O43823 692 aaKnown RBP12.75□□□□□ -0.37
IDH3A-205ENST00000558509 ERLIN1O75477 346 aa12.75□□□□□ -0.37
IDH3A-205ENST00000558509 CCL2P13500 99 aa12.75□□□□□ -0.37
IDH3A-205ENST00000558509 ITGA2P17301 1181 aa12.75□□□□□ -0.37
IDH3A-205ENST00000558509 HNF1AP20823 631 aa12.75□□□□□ -0.37
IDH3A-205ENST00000558509 CD247P20963 164 aa12.75□□□□□ -0.37
IDH3A-205ENST00000558509 CSNK1A1P48729 337 aa12.75□□□□□ -0.37
IDH3A-205ENST00000558509 NCALDP61601 193 aa12.75□□□□□ -0.37
IDH3A-205ENST00000558509 RAB1AP62820 205 aa12.75□□□□□ -0.37
IDH3A-205ENST00000558509 HNRNPA0Q13151 305 aaKnown RBP12.75□□□□□ -0.37
IDH3A-205ENST00000558509 ALKBH6Q3KRA9 238 aa12.75□□□□□ -0.37
IDH3A-205ENST00000558509 RUNDC3AQ59EK9 446 aa12.75□□□□□ -0.37
IDH3A-205ENST00000558509 TTMPQ5BVD1 217 aa12.75□□□□□ -0.37
IDH3A-205ENST00000558509 LRFN4Q6PJG9 635 aa12.75□□□□□ -0.37
IDH3A-205ENST00000558509 KRT73Q86Y46 540 aa12.75□□□□□ -0.37
IDH3A-205ENST00000558509 C10orf53Q8N6V4 93 aa12.75□□□□□ -0.37
IDH3A-205ENST00000558509 LINC01356Q8N9X3 169 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms