RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 VSTM5A8MXK1 200 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 ZNF99A8MXY4 864 aaPredicted RBP7.43□□□□□ -1.22
TPM1-213ENST00000558400 NPIPB4C9JG80 1138 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 LRRN3E7EW58 273 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 C11orf98E9PRG8 122 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 KPNA4O00629 521 aaPredicted RBP7.43□□□□□ -1.22
TPM1-213ENST00000558400 CLOCKO15516 846 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 SMPD2O60906 423 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 NR2C1P13056 603 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 HLA-DOBP13765 273 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 IFNGR1P15260 489 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 NCK1P16333 377 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 TCN1P20061 433 aaPredicted RBP7.43□□□□□ -1.22
TPM1-213ENST00000558400 CD40P25942 277 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 SLC9A3P48764 834 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 DAP3P51398 398 aaKnown RBP7.43□□□□□ -1.22
TPM1-213ENST00000558400 FOXG1P55316 489 aaPredicted RBP7.43□□□□□ -1.22
TPM1-213ENST00000558400 PRKCDQ05655 676 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 DGCR6Q14129 220 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 TBRG1Q3YBR2 411 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 C9orf135Q5VTT2 229 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 SHEQ5VZ18 495 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 ZNF730Q6ZMV8 503 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 TMEM123Q8N131 208 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 LRRC17Q8N6Y2 441 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 RNF148Q8N7C7 305 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 IL17RDQ8NFM7 739 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 OR1K1Q8NGR3 316 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 FNDC8Q8TC99 324 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 BCAS4Q8TDM0 211 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 TMEM171Q8WVE6 324 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 ACOT11Q8WXI4 607 aaPredicted RBP7.43□□□□□ -1.22
TPM1-213ENST00000558400 AKAP1Q92667 903 aaKnown RBP eCLIP7.43□□□□□ -1.22
TPM1-213ENST00000558400 FBXW5Q969U6 566 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 ZNF566Q969W8 418 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 BPIFA2Q96DR5 249 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 TXNDC15Q96J42 360 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 NSMCE2Q96MF7 247 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 CCL19Q99731 98 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 EMC6Q9BV81 110 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 GRIP2Q9C0E4 1043 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 NDEL1Q9GZM8 345 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 C1orf21Q9H246 121 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 MUC13Q9H3R2 512 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 CXorf56Q9H5V9 222 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 CRLF2Q9HC73 371 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 KRCC1Q9NPI7 259 aaPredicted RBP7.43□□□□□ -1.22
TPM1-213ENST00000558400 CISD1Q9NZ45 108 aaKnown RBP7.43□□□□□ -1.22
TPM1-213ENST00000558400 GMPR2Q9P2T1 348 aaKnown RBP7.43□□□□□ -1.22
TPM1-213ENST00000558400 TMEM5Q9Y2B1 443 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 POFUT2Q9Y2G5 429 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 SNX13Q9Y5W8 968 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 DCHS2Q6V1P9 2916 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 ALPK2Q86TB3 2170 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 A0A087WUU8 490 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 MCIDASD6RGH6 385 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 M0R1B8 84 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 M0R3G1 203 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 ABCD4O14678 606 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 FFAR1O14842 300 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 SERPINI2O75830 405 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 STAMBPO95630 424 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 PLAUP00749 431 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 IGHG1P01857 330 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 H1F0P07305 194 aaKnown RBP7.42□□□□□ -1.22
TPM1-213ENST00000558400 TSPAN19P0C672 248 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 SAGP10523 405 aaPredicted RBP7.42□□□□□ -1.22
TPM1-213ENST00000558400 BMP4P12644 408 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 IFI30P13284 250 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 CBR1P16152 277 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 HOXB6P17509 224 aaKnown RBP7.42□□□□□ -1.22
TPM1-213ENST00000558400 ARR3P36575 388 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 YAP1P46937 504 aaKnown RBP7.42□□□□□ -1.22
TPM1-213ENST00000558400 CSNK1A1P48729 337 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 ZNF83P51522 516 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 UGT2B15P54855 530 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 BIDP55957 195 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 ARF1P84077 181 aaKnown RBP7.42□□□□□ -1.22
TPM1-213ENST00000558400 RPL18Q07020 188 aaKnown RBP7.42□□□□□ -1.22
TPM1-213ENST00000558400 FOXD4Q12950 439 aaPredicted RBP7.42□□□□□ -1.22
TPM1-213ENST00000558400 CAMK2DQ13557 499 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 LAPTM4AQ15012 233 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 CEACAM16Q2WEN9 425 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 ZNF672Q499Z4 452 aaPredicted RBP7.42□□□□□ -1.22
TPM1-213ENST00000558400 MTX3Q5HYI7 312 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 CARD17Q5XLA6 110 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 SLC22A25Q6T423 547 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 PRSS57Q6UWY2 283 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 SEZ6L2Q6UXD5 910 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 TMPRSS11FQ6ZWK6 438 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 MBOAT2Q6ZWT7 520 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 ZNF627Q7L945 461 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 TRPM8Q7Z2W7 1104 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 SLC46A3Q7Z3Q1 461 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 PIWIL3Q7Z3Z3 882 aaKnown RBP7.42□□□□□ -1.22
TPM1-213ENST00000558400 DPPA2Q7Z7J5 298 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 OAFQ86UD1 273 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 NRMQ8IXM6 262 aa7.42□□□□□ -1.22
TPM1-213ENST00000558400 RBM15BQ8NDT2 890 aaKnown RBP7.42□□□□□ -1.22
TPM1-213ENST00000558400 PFN4Q8NHR9 129 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms