RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 PLBD1Q6P4A8 553 aa15.03■□□□□ -0
SNX1-203ENST00000558040 P4HA3Q7Z4N8 544 aa15.03■□□□□ -0
SNX1-203ENST00000558040 NPEPL1Q8NDH3 523 aa15.03■□□□□ -0
SNX1-203ENST00000558040 OR6X1Q8NH79 312 aa15.03■□□□□ -0
SNX1-203ENST00000558040 FNDC9Q8TBE3 224 aa15.03■□□□□ -0
SNX1-203ENST00000558040 ZNF566Q969W8 418 aa15.03■□□□□ -0
SNX1-203ENST00000558040 ZNF582Q96NG8 517 aaPredicted RBP15.03■□□□□ -0
SNX1-203ENST00000558040 NMNAT3Q96T66 252 aa15.03■□□□□ -0
SNX1-203ENST00000558040 SLX1AQ9BQ83 275 aa15.03■□□□□ -0
SNX1-203ENST00000558040 MED29Q9NX70 200 aa15.03■□□□□ -0
SNX1-203ENST00000558040 SCN3BQ9NY72 215 aa15.03■□□□□ -0
SNX1-203ENST00000558040 AASSQ9UDR5 926 aa15.03■□□□□ -0
SNX1-203ENST00000558040 ZNF407Q9C0G0 2248 aa15.02■□□□□ -0
SNX1-203ENST00000558040 LOC400499M0QZD8 3231 aa15.02■□□□□ -0
SNX1-203ENST00000558040 IGKV3D-15A0A087WSY6 115 aa15.02■□□□□ -0
SNX1-203ENST00000558040 PRSS37A4D1T9 235 aa15.02■□□□□ -0
SNX1-203ENST00000558040 ZNF716A6NP11 495 aa15.02■□□□□ -0
SNX1-203ENST00000558040 TTLL8A6PVC2 850 aa15.02■□□□□ -0
SNX1-203ENST00000558040 CENPBD1B2RD01 187 aa15.02■□□□□ -0
SNX1-203ENST00000558040 SLC1A7O00341 560 aa15.02■□□□□ -0
SNX1-203ENST00000558040 PRODHO43272 600 aa15.02■□□□□ -0
SNX1-203ENST00000558040 FAM20BO75063 409 aa15.02■□□□□ -0
SNX1-203ENST00000558040 ENTPD6O75354 484 aa15.02■□□□□ -0
SNX1-203ENST00000558040 IGHG1P01857 330 aa15.02■□□□□ -0
SNX1-203ENST00000558040 NR2C1P13056 603 aa15.02■□□□□ -0
SNX1-203ENST00000558040 GABRA1P14867 456 aa15.02■□□□□ -0
SNX1-203ENST00000558040 PTGER4P35408 488 aa15.02■□□□□ -0
SNX1-203ENST00000558040 CDKN2AP42771 156 aaKnown RBP15.02■□□□□ -0
SNX1-203ENST00000558040 TDGF1P3P51864 188 aa15.02■□□□□ -0
SNX1-203ENST00000558040 SLC25A1P53007 311 aa15.02■□□□□ -0
SNX1-203ENST00000558040 CLDN17P56750 224 aa15.02■□□□□ -0
SNX1-203ENST00000558040 LGALS3BPQ08380 585 aa15.02■□□□□ -0
SNX1-203ENST00000558040 LY6DQ14210 128 aa15.02■□□□□ -0
SNX1-203ENST00000558040 AADACL4Q5VUY2 407 aa15.02■□□□□ -0
SNX1-203ENST00000558040 NHLRC1Q6VVB1 395 aa15.02■□□□□ -0
SNX1-203ENST00000558040 CYB561A3Q8NBI2 242 aa15.02■□□□□ -0
SNX1-203ENST00000558040 BPIFB6Q8NFQ5 453 aa15.02■□□□□ -0
SNX1-203ENST00000558040 OR5M9Q8NGP3 310 aa15.02■□□□□ -0
SNX1-203ENST00000558040 FNDC8Q8TC99 324 aa15.02■□□□□ -0
SNX1-203ENST00000558040 ABHD3Q8WU67 409 aa15.02■□□□□ -0
SNX1-203ENST00000558040 SLC25A44Q96H78 314 aaPredicted RBP15.02■□□□□ -0
SNX1-203ENST00000558040 TXNDC15Q96J42 360 aa15.02■□□□□ -0
SNX1-203ENST00000558040 RNF122Q9H9V4 155 aa15.02■□□□□ -0
SNX1-203ENST00000558040 PLCXD1Q9NUJ7 323 aa15.02■□□□□ -0
SNX1-203ENST00000558040 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.02■□□□□ -0
SNX1-203ENST00000558040 RCE1Q9Y256 329 aa15.02■□□□□ -0
SNX1-203ENST00000558040 TPRKBQ9Y3C4 175 aa15.02■□□□□ -0
SNX1-203ENST00000558040 RPL36Q9Y3U8 105 aaKnown RBP15.02■□□□□ -0
SNX1-203ENST00000558040 CFAP47Q6ZTR5 3102 aa15.01□□□□□ -0.01
SNX1-203ENST00000558040 CHD8Q9HCK8 2581 aa15.01□□□□□ -0.01
SNX1-203ENST00000558040 SLC35F4A4IF30 521 aa15.01□□□□□ -0.01
SNX1-203ENST00000558040 FAM183AA6NL82 134 aa15.01□□□□□ -0.01
SNX1-203ENST00000558040 FIGNL2A6NMB9 653 aa15.01□□□□□ -0.01
SNX1-203ENST00000558040 WDR1O75083 606 aa15.01□□□□□ -0.01
SNX1-203ENST00000558040 ABOP16442 354 aa15.01□□□□□ -0.01
SNX1-203ENST00000558040 CDH11P55287 796 aa15.01□□□□□ -0.01
SNX1-203ENST00000558040 CLRN1P58418 232 aa15.01□□□□□ -0.01
SNX1-203ENST00000558040 RBPJQ06330 500 aa15.01□□□□□ -0.01
SNX1-203ENST00000558040 KCTD21Q4G0X4 260 aa15.01□□□□□ -0.01
SNX1-203ENST00000558040 LAIR2Q6ISS4 152 aa15.01□□□□□ -0.01
SNX1-203ENST00000558040 NIPAL3Q6P499 406 aa15.01□□□□□ -0.01
SNX1-203ENST00000558040 DNM1P34Q6PK57 102 aa15.01□□□□□ -0.01
SNX1-203ENST00000558040 GFRALQ6UXV0 394 aa15.01□□□□□ -0.01
SNX1-203ENST00000558040 ADGRE4PQ86SQ3 457 aa15.01□□□□□ -0.01
SNX1-203ENST00000558040 OR2T4Q8NH00 348 aa15.01□□□□□ -0.01
SNX1-203ENST00000558040 TRIB1Q96RU8 372 aa15.01□□□□□ -0.01
SNX1-203ENST00000558040 DDOQ99489 341 aa15.01□□□□□ -0.01
SNX1-203ENST00000558040 ALG12Q9BV10 488 aa15.01□□□□□ -0.01
SNX1-203ENST00000558040 EMC6Q9BV81 110 aa15.01□□□□□ -0.01
SNX1-203ENST00000558040 GP6Q9HCN6 339 aa15.01□□□□□ -0.01
SNX1-203ENST00000558040 GLRX2Q9NS18 164 aa15.01□□□□□ -0.01
SNX1-203ENST00000558040 ASF1BQ9NVP2 202 aa15.01□□□□□ -0.01
SNX1-203ENST00000558040 VSX1Q9NZR4 365 aaPredicted RBP15.01□□□□□ -0.01
SNX1-203ENST00000558040 CLCF1Q9UBD9 225 aa15.01□□□□□ -0.01
SNX1-203ENST00000558040 FLVCR1Q9Y5Y0 555 aa15.01□□□□□ -0.01
SNX1-203ENST00000558040 DNAJC13O75165 2243 aa15.01□□□□□ -0.01
SNX1-203ENST00000558040 OR6C68A6NDL8 312 aa15□□□□□ -0.01
SNX1-203ENST00000558040 SLC22A31A6NKX4 558 aa15□□□□□ -0.01
SNX1-203ENST00000558040 ZNF724A8MTY0 619 aa15□□□□□ -0.01
SNX1-203ENST00000558040 TRMUO75648 421 aaKnown RBP15□□□□□ -0.01
SNX1-203ENST00000558040 SMNDC1O75940 238 aaKnown RBP eCLIP15□□□□□ -0.01
SNX1-203ENST00000558040 AQP8O94778 261 aa15□□□□□ -0.01
SNX1-203ENST00000558040 TPOP07202 933 aa15□□□□□ -0.01
SNX1-203ENST00000558040 RPSAP08865 295 aaKnown RBP15□□□□□ -0.01
SNX1-203ENST00000558040 HOXD4P09016 255 aaPredicted RBP15□□□□□ -0.01
SNX1-203ENST00000558040 CRHBPP24387 322 aa15□□□□□ -0.01
SNX1-203ENST00000558040 CRABP1P29762 137 aa15□□□□□ -0.01
SNX1-203ENST00000558040 HTR1FP30939 366 aa15□□□□□ -0.01
SNX1-203ENST00000558040 NUDT6P53370 316 aa15□□□□□ -0.01
SNX1-203ENST00000558040 RPS7P62081 194 aaKnown RBP15□□□□□ -0.01
SNX1-203ENST00000558040 TMED1Q13445 227 aa15□□□□□ -0.01
SNX1-203ENST00000558040 SMN1Q16637 294 aaKnown RBP15□□□□□ -0.01
SNX1-203ENST00000558040 ACSF3Q4G176 576 aaPredicted RBP15□□□□□ -0.01
SNX1-203ENST00000558040 KLHL12Q53G59 568 aa15□□□□□ -0.01
SNX1-203ENST00000558040 PRR30Q53SZ7 412 aaPredicted RBP15□□□□□ -0.01
SNX1-203ENST00000558040 SLC35D3Q5M8T2 416 aa15□□□□□ -0.01
SNX1-203ENST00000558040 LCN1P1Q5VSP4 162 aa15□□□□□ -0.01
SNX1-203ENST00000558040 ZNF585AQ6P3V2 769 aa15□□□□□ -0.01
SNX1-203ENST00000558040 BCDIN3DQ7Z5W3 292 aaKnown RBP15□□□□□ -0.01
SNX1-203ENST00000558040 FGD2Q7Z6J4 655 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms