RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 ROR2Q01974 943 aaKnown RBP12.62□□□□□ -0.39
USP3-205ENST00000557884 TLE4Q04727 773 aa12.62□□□□□ -0.39
USP3-205ENST00000557884 FHL1Q13642 323 aa12.62□□□□□ -0.39
USP3-205ENST00000557884 ACKR1Q16570 336 aa12.62□□□□□ -0.39
USP3-205ENST00000557884 ZBED5Q49AG3 693 aa12.62□□□□□ -0.39
USP3-205ENST00000557884 PHYHD1Q5SRE7 291 aa12.62□□□□□ -0.39
USP3-205ENST00000557884 HMBOX1Q6NT76 420 aa12.62□□□□□ -0.39
USP3-205ENST00000557884 WFDC8Q8IUA0 241 aa12.62□□□□□ -0.39
USP3-205ENST00000557884 C20orf196Q8IYI0 205 aa12.62□□□□□ -0.39
USP3-205ENST00000557884 OR6N1Q8NGY5 312 aa12.62□□□□□ -0.39
USP3-205ENST00000557884 CCM2LQ9NUG4 571 aaPredicted RBP12.62□□□□□ -0.39
USP3-205ENST00000557884 HCFC1P51610 2035 aa12.61□□□□□ -0.39
USP3-205ENST00000557884 OR6C65A6NJZ3 312 aa12.61□□□□□ -0.39
USP3-205ENST00000557884 GNGT2O14610 69 aa12.61□□□□□ -0.39
USP3-205ENST00000557884 CASKO14936 926 aa12.61□□□□□ -0.39
USP3-205ENST00000557884 KLF4O43474 513 aa12.61□□□□□ -0.39
USP3-205ENST00000557884 CCNB2O95067 398 aa12.61□□□□□ -0.39
USP3-205ENST00000557884 PPP3CBP16298 524 aa12.61□□□□□ -0.39
USP3-205ENST00000557884 ZNF26P17031 533 aaPredicted RBP12.61□□□□□ -0.39
USP3-205ENST00000557884 RPL4P36578 427 aaKnown RBP12.61□□□□□ -0.39
USP3-205ENST00000557884 IFNGR2P38484 337 aa12.61□□□□□ -0.39
USP3-205ENST00000557884 DAP3P51398 398 aaKnown RBP12.61□□□□□ -0.39
USP3-205ENST00000557884 HMGA2P52926 109 aa12.61□□□□□ -0.39
USP3-205ENST00000557884 RUNX1T1Q06455 604 aa12.61□□□□□ -0.39
USP3-205ENST00000557884 PGBD2Q6P3X8 592 aa12.61□□□□□ -0.39
USP3-205ENST00000557884 ABHD12BQ7Z5M8 362 aaPredicted RBP12.61□□□□□ -0.39
USP3-205ENST00000557884 LRRC75AQ8NAA5 344 aa12.61□□□□□ -0.39
USP3-205ENST00000557884 OR6X1Q8NH79 312 aa12.61□□□□□ -0.39
USP3-205ENST00000557884 ASB10Q8WXI3 467 aa12.61□□□□□ -0.39
USP3-205ENST00000557884 ZNF837Q96EG3 531 aaPredicted RBP12.61□□□□□ -0.39
USP3-205ENST00000557884 LINC00470Q9BZP3 86 aa12.61□□□□□ -0.39
USP3-205ENST00000557884 YY1AP1Q9H869 796 aa12.61□□□□□ -0.39
USP3-205ENST00000557884 GPR35Q9HC97 309 aa12.61□□□□□ -0.39
USP3-205ENST00000557884 IL20RAQ9UHF4 553 aa12.61□□□□□ -0.39
USP3-205ENST00000557884 PKDREJQ9NTG1 2253 aa12.61□□□□□ -0.39
USP3-205ENST00000557884 ABCA12Q86UK0 2595 aa12.61□□□□□ -0.39
USP3-205ENST00000557884 A0A1W2PR80 420 aa12.6□□□□□ -0.39
USP3-205ENST00000557884 A6NNC1 897 aa12.6□□□□□ -0.39
USP3-205ENST00000557884 TIPRLO75663 272 aa12.6□□□□□ -0.39
USP3-205ENST00000557884 SEC14L2O76054 403 aa12.6□□□□□ -0.39
USP3-205ENST00000557884 ERVK-25P63136 954 aa12.6□□□□□ -0.39
USP3-205ENST00000557884 TGFBR3Q03167 851 aa12.6□□□□□ -0.39
USP3-205ENST00000557884 TAB1Q15750 504 aa12.6□□□□□ -0.39
USP3-205ENST00000557884 GABRA6Q16445 453 aa12.6□□□□□ -0.39
USP3-205ENST00000557884 CEACAM16Q2WEN9 425 aa12.6□□□□□ -0.39
USP3-205ENST00000557884 HIKESHIQ53FT3 197 aa12.6□□□□□ -0.39
USP3-205ENST00000557884 THSD4Q6ZMP0 1018 aa12.6□□□□□ -0.39
USP3-205ENST00000557884 TMEM200AQ86VY9 491 aa12.6□□□□□ -0.39
USP3-205ENST00000557884 SYT14Q8NB59 555 aa12.6□□□□□ -0.39
USP3-205ENST00000557884 AQP11Q8NBQ7 271 aa12.6□□□□□ -0.39
USP3-205ENST00000557884 PAPD5Q8NDF8 572 aaKnown RBP12.6□□□□□ -0.39
USP3-205ENST00000557884 OR52N5Q8NH56 324 aa12.6□□□□□ -0.39
USP3-205ENST00000557884 FANK1Q8TC84 345 aa12.6□□□□□ -0.39
USP3-205ENST00000557884 GNPDA2Q8TDQ7 276 aa12.6□□□□□ -0.39
USP3-205ENST00000557884 ZNF566Q969W8 418 aa12.6□□□□□ -0.39
USP3-205ENST00000557884 SLC25A44Q96H78 314 aaPredicted RBP12.6□□□□□ -0.39
USP3-205ENST00000557884 ADAD1Q96M93 576 aaKnown RBP12.6□□□□□ -0.39
USP3-205ENST00000557884 TSPAN32Q96QS1 320 aa12.6□□□□□ -0.39
USP3-205ENST00000557884 KATNB1Q9BVA0 655 aa12.6□□□□□ -0.39
USP3-205ENST00000557884 POLDIP3Q9BY77 421 aaKnown RBP12.6□□□□□ -0.39
USP3-205ENST00000557884 ULBP2Q9BZM5 246 aa12.6□□□□□ -0.39
USP3-205ENST00000557884 OR10A4Q9H209 315 aa12.6□□□□□ -0.39
USP3-205ENST00000557884 TXNIPQ9H3M7 391 aa12.6□□□□□ -0.39
USP3-205ENST00000557884 CRLF2Q9HC73 371 aa12.6□□□□□ -0.39
USP3-205ENST00000557884 B3GAT2Q9NPZ5 323 aa12.6□□□□□ -0.39
USP3-205ENST00000557884 ZNF226Q9NYT6 803 aa12.6□□□□□ -0.39
USP3-205ENST00000557884 SIGLEC7Q9Y286 467 aa12.6□□□□□ -0.39
USP3-205ENST00000557884 ADAM18Q9Y3Q7 739 aa12.6□□□□□ -0.39
USP3-205ENST00000557884 A0A096LPE4 126 aa12.59□□□□□ -0.39
USP3-205ENST00000557884 A0A1W2PPZ6 126 aa12.59□□□□□ -0.39
USP3-205ENST00000557884 OR5H1A6NKK0 313 aa12.59□□□□□ -0.39
USP3-205ENST00000557884 SIAH2O43255 324 aa12.59□□□□□ -0.39
USP3-205ENST00000557884 PTP4A3O75365 173 aa12.59□□□□□ -0.39
USP3-205ENST00000557884 E2F6O75461 281 aa12.59□□□□□ -0.39
USP3-205ENST00000557884 TRMUO75648 421 aaKnown RBP12.59□□□□□ -0.39
USP3-205ENST00000557884 NDUFB2O95178 105 aa12.59□□□□□ -0.39
USP3-205ENST00000557884 IGHG1P01857 330 aa12.59□□□□□ -0.39
USP3-205ENST00000557884 PGA4P0DJD7 388 aa12.59□□□□□ -0.39
USP3-205ENST00000557884 PGA3P0DJD8 388 aa12.59□□□□□ -0.39
USP3-205ENST00000557884 HOXB6P17509 224 aaKnown RBP12.59□□□□□ -0.39
USP3-205ENST00000557884 CRYGSP22914 178 aa12.59□□□□□ -0.39
USP3-205ENST00000557884 FPR3P25089 353 aa12.59□□□□□ -0.39
USP3-205ENST00000557884 SSTR2P30874 369 aa12.59□□□□□ -0.39
USP3-205ENST00000557884 ACVR1BP36896 505 aa12.59□□□□□ -0.39
USP3-205ENST00000557884 CLRN1P58418 232 aa12.59□□□□□ -0.39
USP3-205ENST00000557884 PRPS1P60891 318 aa12.59□□□□□ -0.39
USP3-205ENST00000557884 ARF1P84077 181 aaKnown RBP12.59□□□□□ -0.39
USP3-205ENST00000557884 KPNB1Q14974 876 aaKnown RBP12.59□□□□□ -0.39
USP3-205ENST00000557884 MICAQ29983 383 aa12.59□□□□□ -0.39
USP3-205ENST00000557884 ANKDD1AQ495B1 522 aa12.59□□□□□ -0.39
USP3-205ENST00000557884 ARMC4Q5T2S8 1044 aa12.59□□□□□ -0.39
USP3-205ENST00000557884 FBXW10Q5XX13 1052 aa12.59□□□□□ -0.39
USP3-205ENST00000557884 C1orf94Q6P1W5 598 aa12.59□□□□□ -0.39
USP3-205ENST00000557884 TMEM179BQ7Z7N9 219 aa12.59□□□□□ -0.39
USP3-205ENST00000557884 OR10G2Q8NGC3 310 aa12.59□□□□□ -0.39
USP3-205ENST00000557884 HSD17B8Q92506 261 aa12.59□□□□□ -0.39
USP3-205ENST00000557884 HDAC2Q92769 488 aaKnown RBP12.59□□□□□ -0.39
USP3-205ENST00000557884 TMEM54Q969K7 222 aa12.59□□□□□ -0.39
USP3-205ENST00000557884 GTPBP3Q969Y2 492 aaKnown RBP12.59□□□□□ -0.39
USP3-205ENST00000557884 C14orf79Q96F83 325 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms