RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 TXNDC15Q96J42 360 aa10.96□□□□□ -0.65
SLIRP-211ENST00000557623 TMEM204Q9BSN7 226 aa10.96□□□□□ -0.65
SLIRP-211ENST00000557623 EMC6Q9BV81 110 aa10.96□□□□□ -0.65
SLIRP-211ENST00000557623 LIME1Q9H400 295 aa10.96□□□□□ -0.65
SLIRP-211ENST00000557623 UBTD1Q9HAC8 227 aa10.96□□□□□ -0.65
SLIRP-211ENST00000557623 NMNAT1Q9HAN9 279 aaPredicted RBP10.96□□□□□ -0.65
SLIRP-211ENST00000557623 GPR35Q9HC97 309 aa10.96□□□□□ -0.65
SLIRP-211ENST00000557623 MOV10Q9HCE1 1003 aaKnown RBP10.96□□□□□ -0.65
SLIRP-211ENST00000557623 MAN2C1Q9NTJ4 1040 aa10.96□□□□□ -0.65
SLIRP-211ENST00000557623 NDUFAF4Q9P032 175 aa10.96□□□□□ -0.65
SLIRP-211ENST00000557623 ACTR3BQ9P1U1 418 aa10.96□□□□□ -0.65
SLIRP-211ENST00000557623 STX18Q9P2W9 335 aaKnown RBP10.96□□□□□ -0.65
SLIRP-211ENST00000557623 ITGB1BP2Q9UKP3 347 aa10.96□□□□□ -0.65
SLIRP-211ENST00000557623 MGAT4BQ9UQ53 548 aa10.96□□□□□ -0.65
SLIRP-211ENST00000557623 PLEKHA6Q9Y2H5 1048 aa10.96□□□□□ -0.65
SLIRP-211ENST00000557623 RNF115Q9Y4L5 304 aa10.96□□□□□ -0.65
SLIRP-211ENST00000557623 ANKRD17O75179 2603 aaKnown RBP10.96□□□□□ -0.66
SLIRP-211ENST00000557623 ABCA12Q86UK0 2595 aa10.96□□□□□ -0.66
SLIRP-211ENST00000557623 A0A1W2PRQ8 180 aa10.95□□□□□ -0.66
SLIRP-211ENST00000557623 M0R3G1 203 aa10.95□□□□□ -0.66
SLIRP-211ENST00000557623 PIP5K1CO60331 668 aa10.95□□□□□ -0.66
SLIRP-211ENST00000557623 STAMBPO95630 424 aa10.95□□□□□ -0.66
SLIRP-211ENST00000557623 BCL10O95999 233 aa10.95□□□□□ -0.66
SLIRP-211ENST00000557623 TSPAN19P0C672 248 aa10.95□□□□□ -0.66
SLIRP-211ENST00000557623 PTAFRP25105 342 aa10.95□□□□□ -0.66
SLIRP-211ENST00000557623 SLC9A3P48764 834 aa10.95□□□□□ -0.66
SLIRP-211ENST00000557623 DAP3P51398 398 aaKnown RBP10.95□□□□□ -0.66
SLIRP-211ENST00000557623 IST1P53990 364 aa10.95□□□□□ -0.66
SLIRP-211ENST00000557623 BIDP55957 195 aa10.95□□□□□ -0.66
SLIRP-211ENST00000557623 UBE2NP61088 152 aaKnown RBP10.95□□□□□ -0.66
SLIRP-211ENST00000557623 RPL18Q07020 188 aaKnown RBP10.95□□□□□ -0.66
SLIRP-211ENST00000557623 BSPH1Q075Z2 132 aa10.95□□□□□ -0.66
SLIRP-211ENST00000557623 CAMK2DQ13557 499 aa10.95□□□□□ -0.66
SLIRP-211ENST00000557623 DGCR6Q14129 220 aa10.95□□□□□ -0.66
SLIRP-211ENST00000557623 TBRG1Q3YBR2 411 aa10.95□□□□□ -0.66
SLIRP-211ENST00000557623 CARD17Q5XLA6 110 aa10.95□□□□□ -0.66
SLIRP-211ENST00000557623 SEZ6L2Q6UXD5 910 aa10.95□□□□□ -0.66
SLIRP-211ENST00000557623 TMEM108Q6UXF1 575 aa10.95□□□□□ -0.66
SLIRP-211ENST00000557623 LINGO2Q7L985 606 aa10.95□□□□□ -0.66
SLIRP-211ENST00000557623 NRMQ8IXM6 262 aa10.95□□□□□ -0.66
SLIRP-211ENST00000557623 FAM86B1Q8N7N1 296 aa10.95□□□□□ -0.66
SLIRP-211ENST00000557623 WDR31Q8NA23 367 aa10.95□□□□□ -0.66
SLIRP-211ENST00000557623 MBD6Q96DN6 1003 aa10.95□□□□□ -0.66
SLIRP-211ENST00000557623 SLC25A44Q96H78 314 aaPredicted RBP10.95□□□□□ -0.66
SLIRP-211ENST00000557623 RADILQ96JH8 1075 aa10.95□□□□□ -0.66
SLIRP-211ENST00000557623 C7orf34Q96L11 122 aa10.95□□□□□ -0.66
SLIRP-211ENST00000557623 PIP5K1AQ99755 562 aa10.95□□□□□ -0.66
SLIRP-211ENST00000557623 CRLF2Q9HC73 371 aa10.95□□□□□ -0.66
SLIRP-211ENST00000557623 KRCC1Q9NPI7 259 aaPredicted RBP10.95□□□□□ -0.66
SLIRP-211ENST00000557623 INIPQ9NRY2 104 aa10.95□□□□□ -0.66
SLIRP-211ENST00000557623 TAS2R1Q9NYW7 299 aa10.95□□□□□ -0.66
SLIRP-211ENST00000557623 TMEM5Q9Y2B1 443 aa10.95□□□□□ -0.66
SLIRP-211ENST00000557623 V9GYQ6 96 aa10.95□□□□□ -0.66
SLIRP-211ENST00000557623 A0A087WUU8 490 aa10.94□□□□□ -0.66
SLIRP-211ENST00000557623 ARPC4-TTLL3A0A0A6YYG9 625 aa10.94□□□□□ -0.66
SLIRP-211ENST00000557623 A0A1W2PR80 420 aa10.94□□□□□ -0.66
SLIRP-211ENST00000557623 DPRXA6NFQ7 191 aa10.94□□□□□ -0.66
SLIRP-211ENST00000557623 ZNF99A8MXY4 864 aaPredicted RBP10.94□□□□□ -0.66
SLIRP-211ENST00000557623 EFCAB9A8MZ26 197 aa10.94□□□□□ -0.66
SLIRP-211ENST00000557623 CENPBD1B2RD01 187 aa10.94□□□□□ -0.66
SLIRP-211ENST00000557623 MCIDASD6RGH6 385 aa10.94□□□□□ -0.66
SLIRP-211ENST00000557623 hCG_2039718K7EN88 272 aa10.94□□□□□ -0.66
SLIRP-211ENST00000557623 HS3ST1O14792 307 aa10.94□□□□□ -0.66
SLIRP-211ENST00000557623 CLOCKO15516 846 aa10.94□□□□□ -0.66
SLIRP-211ENST00000557623 UBOX5O94941 541 aa10.94□□□□□ -0.66
SLIRP-211ENST00000557623 ATE1O95260 518 aa10.94□□□□□ -0.66
SLIRP-211ENST00000557623 SEMG1P04279 462 aa10.94□□□□□ -0.66
SLIRP-211ENST00000557623 FABP3P05413 133 aa10.94□□□□□ -0.66
SLIRP-211ENST00000557623 SAGP10523 405 aaPredicted RBP10.94□□□□□ -0.66
SLIRP-211ENST00000557623 AQP2P41181 271 aa10.94□□□□□ -0.66
SLIRP-211ENST00000557623 CSNK1A1P48729 337 aa10.94□□□□□ -0.66
SLIRP-211ENST00000557623 ZNF83P51522 516 aa10.94□□□□□ -0.66
SLIRP-211ENST00000557623 VLDLRP98155 873 aa10.94□□□□□ -0.66
SLIRP-211ENST00000557623 TRIM25Q14258 630 aaKnown RBP10.94□□□□□ -0.66
SLIRP-211ENST00000557623 TAF11Q15544 211 aa10.94□□□□□ -0.66
SLIRP-211ENST00000557623 CEACAM16Q2WEN9 425 aa10.94□□□□□ -0.66
SLIRP-211ENST00000557623 DNAL1Q4LDG9 190 aa10.94□□□□□ -0.66
SLIRP-211ENST00000557623 ADAM5Q6NVV9 412 aa10.94□□□□□ -0.66
SLIRP-211ENST00000557623 TMPRSS11FQ6ZWK6 438 aa10.94□□□□□ -0.66
SLIRP-211ENST00000557623 TSEN54Q7Z6J9 526 aaKnown RBP10.94□□□□□ -0.66
SLIRP-211ENST00000557623 DHFR2Q86XF0 187 aa10.94□□□□□ -0.66
SLIRP-211ENST00000557623 CCDC36Q8IYA8 594 aa10.94□□□□□ -0.66
SLIRP-211ENST00000557623 DEPDC4Q8N2C3 294 aa10.94□□□□□ -0.66
SLIRP-211ENST00000557623 BCL2L2Q92843 193 aaPredicted RBP10.94□□□□□ -0.66
SLIRP-211ENST00000557623 PIGTQ969N2 578 aa10.94□□□□□ -0.66
SLIRP-211ENST00000557623 ZNF566Q969W8 418 aa10.94□□□□□ -0.66
SLIRP-211ENST00000557623 ZNF347Q96SE7 839 aa10.94□□□□□ -0.66
SLIRP-211ENST00000557623 FOXC2Q99958 501 aa10.94□□□□□ -0.66
SLIRP-211ENST00000557623 ULBP2Q9BZM5 246 aa10.94□□□□□ -0.66
SLIRP-211ENST00000557623 NDEL1Q9GZM8 345 aa10.94□□□□□ -0.66
SLIRP-211ENST00000557623 IL1RAPQ9NPH3 570 aa10.94□□□□□ -0.66
SLIRP-211ENST00000557623 CCM2LQ9NUG4 571 aaPredicted RBP10.94□□□□□ -0.66
SLIRP-211ENST00000557623 NPAP1Q9NZP6 1156 aa10.94□□□□□ -0.66
SLIRP-211ENST00000557623 HIF3AQ9Y2N7 669 aa10.94□□□□□ -0.66
SLIRP-211ENST00000557623 PDZD2O15018 2839 aa10.94□□□□□ -0.66
SLIRP-211ENST00000557623 NOTCH2Q04721 2471 aa10.93□□□□□ -0.66
SLIRP-211ENST00000557623 NPIPB13A6NJU9 1138 aa10.93□□□□□ -0.66
SLIRP-211ENST00000557623 NPIPB4C9JG80 1138 aa10.93□□□□□ -0.66
SLIRP-211ENST00000557623 M0R1B8 84 aa10.93□□□□□ -0.66
SLIRP-211ENST00000557623 ENTPD5O75356 428 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms