RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 CFHR2P36980 270 aa7.77□□□□□ -1.17
NEDD1-211ENST00000557454 MDH2P40926 338 aaKnown RBP7.77□□□□□ -1.17
NEDD1-211ENST00000557454 IDH3AP50213 366 aa7.77□□□□□ -1.17
NEDD1-211ENST00000557454 CDH13P55290 713 aa7.77□□□□□ -1.17
NEDD1-211ENST00000557454 CLDN17P56750 224 aa7.77□□□□□ -1.17
NEDD1-211ENST00000557454 RAB1AP62820 205 aa7.77□□□□□ -1.17
NEDD1-211ENST00000557454 TMEM255AQ5JRV8 349 aa7.77□□□□□ -1.17
NEDD1-211ENST00000557454 EMBQ6PCB8 327 aa7.77□□□□□ -1.17
NEDD1-211ENST00000557454 C11orf88Q6PI97 169 aa7.77□□□□□ -1.17
NEDD1-211ENST00000557454 KRT77Q7Z794 578 aa7.77□□□□□ -1.17
NEDD1-211ENST00000557454 KLBQ86Z14 1044 aa7.77□□□□□ -1.17
NEDD1-211ENST00000557454 SCCPDHQ8NBX0 429 aa7.77□□□□□ -1.17
NEDD1-211ENST00000557454 PAPD5Q8NDF8 572 aaKnown RBP7.77□□□□□ -1.17
NEDD1-211ENST00000557454 PPP1R35Q8TAP8 253 aa7.77□□□□□ -1.17
NEDD1-211ENST00000557454 ZNF519Q8TB69 540 aa7.77□□□□□ -1.17
NEDD1-211ENST00000557454 CCDC126Q96EE4 140 aa7.77□□□□□ -1.17
NEDD1-211ENST00000557454 FAM120BQ96EK7 910 aaKnown RBP7.77□□□□□ -1.17
NEDD1-211ENST00000557454 RCC1LQ96I51 464 aaKnown RBP7.77□□□□□ -1.17
NEDD1-211ENST00000557454 CPNE1Q99829 537 aa7.77□□□□□ -1.17
NEDD1-211ENST00000557454 CDADC1Q9BWV3 514 aa7.77□□□□□ -1.17
NEDD1-211ENST00000557454 ACTRT3Q9BYD9 372 aa7.77□□□□□ -1.17
NEDD1-211ENST00000557454 EXD2Q9NVH0 621 aa7.77□□□□□ -1.17
NEDD1-211ENST00000557454 ADPRHL2Q9NX46 363 aa7.77□□□□□ -1.17
NEDD1-211ENST00000557454 POLR3HQ9Y535 204 aaPredicted RBP7.77□□□□□ -1.17
NEDD1-211ENST00000557454 IGHV1-69DA0A0B4J2H0 117 aa7.76□□□□□ -1.17
NEDD1-211ENST00000557454 A6NHS1 94 aa7.76□□□□□ -1.17
NEDD1-211ENST00000557454 P2RY10O00398 339 aa7.76□□□□□ -1.17
NEDD1-211ENST00000557454 ZNF208O43345 1280 aa7.76□□□□□ -1.17
NEDD1-211ENST00000557454 IGHV1-69P01742 117 aa7.76□□□□□ -1.17
NEDD1-211ENST00000557454 IGHV3-13P01766 116 aa7.76□□□□□ -1.17
NEDD1-211ENST00000557454 KRT6AP02538 564 aa7.76□□□□□ -1.17
NEDD1-211ENST00000557454 KRT6BP04259 564 aa7.76□□□□□ -1.17
NEDD1-211ENST00000557454 B4GALT1P15291 398 aa7.76□□□□□ -1.17
NEDD1-211ENST00000557454 EFNA1P20827 205 aaPredicted RBP7.76□□□□□ -1.17
NEDD1-211ENST00000557454 CRABP2P29373 138 aa7.76□□□□□ -1.17
NEDD1-211ENST00000557454 KRT6CP48668 564 aa7.76□□□□□ -1.17
NEDD1-211ENST00000557454 MMP15P51511 669 aa7.76□□□□□ -1.17
NEDD1-211ENST00000557454 PMS2P3Q13401 168 aa7.76□□□□□ -1.17
NEDD1-211ENST00000557454 PPP1R7Q15435 360 aa7.76□□□□□ -1.17
NEDD1-211ENST00000557454 GPR68Q15743 365 aa7.76□□□□□ -1.17
NEDD1-211ENST00000557454 MOGQ16653 247 aa7.76□□□□□ -1.17
NEDD1-211ENST00000557454 FAM83EQ2M2I3 478 aa7.76□□□□□ -1.17
NEDD1-211ENST00000557454 ZNF385BQ569K4 471 aa7.76□□□□□ -1.17
NEDD1-211ENST00000557454 ZNF813Q6ZN06 617 aa7.76□□□□□ -1.17
NEDD1-211ENST00000557454 EIF3MQ7L2H7 374 aaKnown RBP7.76□□□□□ -1.17
NEDD1-211ENST00000557454 OLIG3Q7RTU3 272 aa7.76□□□□□ -1.17
NEDD1-211ENST00000557454 RNF130Q86XS8 419 aa7.76□□□□□ -1.17
NEDD1-211ENST00000557454 PDZD9Q8IXQ8 264 aa7.76□□□□□ -1.17
NEDD1-211ENST00000557454 ZNF283Q8N7M2 679 aa7.76□□□□□ -1.17
NEDD1-211ENST00000557454 FAM71CQ8NEG0 241 aa7.76□□□□□ -1.17
NEDD1-211ENST00000557454 SDR9C7Q8NEX9 313 aa7.76□□□□□ -1.17
NEDD1-211ENST00000557454 ZFP28Q8NHY6 868 aa7.76□□□□□ -1.17
NEDD1-211ENST00000557454 PMM1Q92871 262 aa7.76□□□□□ -1.17
NEDD1-211ENST00000557454 SIGLEC11Q96RL6 698 aa7.76□□□□□ -1.17
NEDD1-211ENST00000557454 SEMA6AQ9H2E6 1030 aa7.76□□□□□ -1.17
NEDD1-211ENST00000557454 ZCCHC3Q9NUD5 404 aaKnown RBP7.76□□□□□ -1.17
NEDD1-211ENST00000557454 OSGIN1Q9UJX0 560 aa7.76□□□□□ -1.17
NEDD1-211ENST00000557454 TANC2Q9HCD6 1990 aa7.76□□□□□ -1.17
NEDD1-211ENST00000557454 A0A1W2PRX2 142 aa7.75□□□□□ -1.17
NEDD1-211ENST00000557454 PLSCR5A0PG75 271 aa7.75□□□□□ -1.17
NEDD1-211ENST00000557454 C22orf46C9J442 243 aa7.75□□□□□ -1.17
NEDD1-211ENST00000557454 M0R3G1 203 aa7.75□□□□□ -1.17
NEDD1-211ENST00000557454 ANGPTL7O43827 346 aa7.75□□□□□ -1.17
NEDD1-211ENST00000557454 SCN2BO60939 215 aa7.75□□□□□ -1.17
NEDD1-211ENST00000557454 JTBO76095 146 aa7.75□□□□□ -1.17
NEDD1-211ENST00000557454 OPN1SWP03999 348 aa7.75□□□□□ -1.17
NEDD1-211ENST00000557454 CHRM2P08172 466 aa7.75□□□□□ -1.17
NEDD1-211ENST00000557454 RPS17P08708 135 aaKnown RBP7.75□□□□□ -1.17
NEDD1-211ENST00000557454 PATE4P0C8F1 98 aa7.75□□□□□ -1.17
NEDD1-211ENST00000557454 MMP9P14780 707 aa7.75□□□□□ -1.17
NEDD1-211ENST00000557454 PGM1P36871 562 aa7.75□□□□□ -1.17
NEDD1-211ENST00000557454 KIR2DS4P43632 304 aa7.75□□□□□ -1.17
NEDD1-211ENST00000557454 IDH2P48735 452 aaKnown RBP7.75□□□□□ -1.17
NEDD1-211ENST00000557454 POLR2HP52434 150 aaKnown RBP7.75□□□□□ -1.17
NEDD1-211ENST00000557454 AQP5P55064 265 aa7.75□□□□□ -1.17
NEDD1-211ENST00000557454 CAMK2DQ13557 499 aa7.75□□□□□ -1.17
NEDD1-211ENST00000557454 ZNF141Q15928 474 aa7.75□□□□□ -1.17
NEDD1-211ENST00000557454 ARHGAP11BQ3KRB8 267 aa7.75□□□□□ -1.17
NEDD1-211ENST00000557454 PHYHD1Q5SRE7 291 aa7.75□□□□□ -1.17
NEDD1-211ENST00000557454 PIWIL3Q7Z3Z3 882 aaKnown RBP7.75□□□□□ -1.17
NEDD1-211ENST00000557454 KDM8Q8N371 416 aa7.75□□□□□ -1.17
NEDD1-211ENST00000557454 SLC30A7Q8NEW0 376 aa7.75□□□□□ -1.17
NEDD1-211ENST00000557454 OR4C13Q8NGP0 309 aa7.75□□□□□ -1.17
NEDD1-211ENST00000557454 OR2T6Q8NHC8 308 aa7.75□□□□□ -1.17
NEDD1-211ENST00000557454 ZNF483Q8TF39 744 aaPredicted RBP7.75□□□□□ -1.17
NEDD1-211ENST00000557454 IPCEF1Q8WWN9 437 aaPredicted RBP7.75□□□□□ -1.17
NEDD1-211ENST00000557454 DDB2Q92466 427 aa7.75□□□□□ -1.17
NEDD1-211ENST00000557454 LHX4Q969G2 390 aa7.75□□□□□ -1.17
NEDD1-211ENST00000557454 RCHY1Q96PM5 261 aa7.75□□□□□ -1.17
NEDD1-211ENST00000557454 PRPF18Q99633 342 aaKnown RBP7.75□□□□□ -1.17
NEDD1-211ENST00000557454 CHID1Q9BWS9 393 aa7.75□□□□□ -1.17
NEDD1-211ENST00000557454 IQCGQ9H095 443 aaKnown RBP7.75□□□□□ -1.17
NEDD1-211ENST00000557454 CDH20Q9HBT6 801 aa7.75□□□□□ -1.17
NEDD1-211ENST00000557454 ZNRD1Q9P1U0 126 aa7.75□□□□□ -1.17
NEDD1-211ENST00000557454 GUCA1BQ9UMX6 200 aa7.75□□□□□ -1.17
NEDD1-211ENST00000557454 GPR45Q9Y5Y3 372 aa7.75□□□□□ -1.17
NEDD1-211ENST00000557454 CCDC189A1A4V9 331 aa7.74□□□□□ -1.17
NEDD1-211ENST00000557454 STX16-NPEPL1H3BU86 382 aa7.74□□□□□ -1.17
NEDD1-211ENST00000557454 AP3D1O14617 1153 aa7.74□□□□□ -1.17
NEDD1-211ENST00000557454 STX16O14662 325 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms