RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 PHYHD1Q5SRE7 291 aa9.02□□□□□ -0.97
SHMT2-224ENST00000556737 KLHL17Q6TDP4 642 aa9.02□□□□□ -0.97
SHMT2-224ENST00000556737 H1FNTQ75WM6 255 aaPredicted RBP9.02□□□□□ -0.97
SHMT2-224ENST00000556737 ABHD12BQ7Z5M8 362 aaPredicted RBP9.02□□□□□ -0.97
SHMT2-224ENST00000556737 BIVMQ86UB2 503 aa9.02□□□□□ -0.97
SHMT2-224ENST00000556737 AQP12AQ8IXF9 295 aa9.02□□□□□ -0.97
SHMT2-224ENST00000556737 PIAS4Q8N2W9 510 aaPredicted RBP9.02□□□□□ -0.97
SHMT2-224ENST00000556737 MAGEE2Q8TD90 523 aaPredicted RBP9.02□□□□□ -0.97
SHMT2-224ENST00000556737 ADAMTS16Q8TE57 1224 aa9.02□□□□□ -0.97
SHMT2-224ENST00000556737 BCL2L2Q92843 193 aaPredicted RBP9.02□□□□□ -0.97
SHMT2-224ENST00000556737 ZNF837Q96EG3 531 aaPredicted RBP9.02□□□□□ -0.97
SHMT2-224ENST00000556737 TPD52L3Q96J77 140 aa9.02□□□□□ -0.97
SHMT2-224ENST00000556737 RADILQ96JH8 1075 aa9.02□□□□□ -0.97
SHMT2-224ENST00000556737 SEPHS2Q99611 448 aa9.02□□□□□ -0.97
SHMT2-224ENST00000556737 EPYCQ99645 322 aa9.02□□□□□ -0.97
SHMT2-224ENST00000556737 PRSS27Q9BQR3 290 aa9.02□□□□□ -0.97
SHMT2-224ENST00000556737 C1QTNF6Q9BXI9 259 aa9.02□□□□□ -0.97
SHMT2-224ENST00000556737 GRIP2Q9C0E4 1043 aa9.02□□□□□ -0.97
SHMT2-224ENST00000556737 MRPL39Q9NYK5 338 aaKnown RBP9.02□□□□□ -0.97
SHMT2-224ENST00000556737 CISD1Q9NZ45 108 aaKnown RBP9.02□□□□□ -0.97
SHMT2-224ENST00000556737 SELENONQ9NZV5 590 aa9.02□□□□□ -0.97
SHMT2-224ENST00000556737 RPS6KA6Q9UK32 745 aa9.02□□□□□ -0.97
SHMT2-224ENST00000556737 SLC7A7Q9UM01 511 aa9.02□□□□□ -0.97
SHMT2-224ENST00000556737 MGAT4BQ9UQ53 548 aa9.02□□□□□ -0.97
SHMT2-224ENST00000556737 CORINQ9Y5Q5 1042 aa9.02□□□□□ -0.97
SHMT2-224ENST00000556737 IGHV1-18A0A0C4DH31 117 aa9.01□□□□□ -0.97
SHMT2-224ENST00000556737 TRAPPC13A5PLN9 417 aa9.01□□□□□ -0.97
SHMT2-224ENST00000556737 ZNF503-AS2A6NEH8 195 aa9.01□□□□□ -0.97
SHMT2-224ENST00000556737 ATP6V1G2-DDX39BF2Z307 99 aa9.01□□□□□ -0.97
SHMT2-224ENST00000556737 PLPP3O14495 311 aa9.01□□□□□ -0.97
SHMT2-224ENST00000556737 NDUFS7O75251 213 aa9.01□□□□□ -0.97
SHMT2-224ENST00000556737 SLC43A1O75387 559 aa9.01□□□□□ -0.97
SHMT2-224ENST00000556737 ATP6V1G2O95670 118 aa9.01□□□□□ -0.97
SHMT2-224ENST00000556737 IGHV4-39P01824 125 aa9.01□□□□□ -0.97
SHMT2-224ENST00000556737 KDELR2P33947 212 aa9.01□□□□□ -0.97
SHMT2-224ENST00000556737 SH3BGRP55822 239 aaPredicted RBP9.01□□□□□ -0.97
SHMT2-224ENST00000556737 ATP5J2P56134 94 aa9.01□□□□□ -0.97
SHMT2-224ENST00000556737 TUBA1BP68363 451 aa9.01□□□□□ -0.97
SHMT2-224ENST00000556737 TUBA4AP68366 448 aa9.01□□□□□ -0.97
SHMT2-224ENST00000556737 POU3F1Q03052 451 aaPredicted RBP9.01□□□□□ -0.97
SHMT2-224ENST00000556737 PUDPQ08623 228 aa9.01□□□□□ -0.97
SHMT2-224ENST00000556737 RCN1Q15293 331 aa9.01□□□□□ -0.97
SHMT2-224ENST00000556737 ZNF74Q16587 644 aa9.01□□□□□ -0.97
SHMT2-224ENST00000556737 FAM98BQ52LJ0 330 aaKnown RBP9.01□□□□□ -0.97
SHMT2-224ENST00000556737 SLC22A25Q6T423 547 aa9.01□□□□□ -0.97
SHMT2-224ENST00000556737 DNM1P46Q6ZS02 220 aa9.01□□□□□ -0.97
SHMT2-224ENST00000556737 TUBA1AQ71U36 451 aa9.01□□□□□ -0.97
SHMT2-224ENST00000556737 FKBP9P1Q75LS8 142 aa9.01□□□□□ -0.97
SHMT2-224ENST00000556737 SLC46A3Q7Z3Q1 461 aa9.01□□□□□ -0.97
SHMT2-224ENST00000556737 MYPOPQ86VE0 399 aaPredicted RBP9.01□□□□□ -0.97
SHMT2-224ENST00000556737 CARM1Q86X55 608 aa9.01□□□□□ -0.97
SHMT2-224ENST00000556737 UEVLDQ8IX04 471 aa9.01□□□□□ -0.97
SHMT2-224ENST00000556737 ANKK1Q8NFD2 765 aa9.01□□□□□ -0.97
SHMT2-224ENST00000556737 RNF217Q8TC41 542 aa9.01□□□□□ -0.97
SHMT2-224ENST00000556737 RASSF5Q8WWW0 418 aa9.01□□□□□ -0.97
SHMT2-224ENST00000556737 LZICQ8WZA0 190 aa9.01□□□□□ -0.97
SHMT2-224ENST00000556737 POM121Q96HA1 1249 aa9.01□□□□□ -0.97
SHMT2-224ENST00000556737 ASPNQ9BXN1 380 aa9.01□□□□□ -0.97
SHMT2-224ENST00000556737 GORASP2Q9H8Y8 452 aa9.01□□□□□ -0.97
SHMT2-224ENST00000556737 SEC61A2Q9H9S3 476 aa9.01□□□□□ -0.97
SHMT2-224ENST00000556737 GPR35Q9HC97 309 aa9.01□□□□□ -0.97
SHMT2-224ENST00000556737 OBP2BQ9NPH6 170 aa9.01□□□□□ -0.97
SHMT2-224ENST00000556737 MED29Q9NX70 200 aa9.01□□□□□ -0.97
SHMT2-224ENST00000556737 CRNNQ9UBG3 495 aaPredicted RBP9.01□□□□□ -0.97
SHMT2-224ENST00000556737 SAMD4AQ9UPU9 718 aaKnown RBP9.01□□□□□ -0.97
SHMT2-224ENST00000556737 NAV3Q8IVL0 2385 aa9□□□□□ -0.97
SHMT2-224ENST00000556737 AKAP8O43823 692 aaKnown RBP9□□□□□ -0.97
SHMT2-224ENST00000556737 KRT33AO76009 404 aa9□□□□□ -0.97
SHMT2-224ENST00000556737 SEC14L2O76054 403 aa9□□□□□ -0.97
SHMT2-224ENST00000556737 WNT11O96014 354 aa9□□□□□ -0.97
SHMT2-224ENST00000556737 MT-ATP6P00846 226 aa9□□□□□ -0.97
SHMT2-224ENST00000556737 IGLV1-44P01699 117 aa9□□□□□ -0.97
SHMT2-224ENST00000556737 HOXB4P17483 251 aaPredicted RBP9□□□□□ -0.97
SHMT2-224ENST00000556737 TTKP33981 857 aa9□□□□□ -0.97
SHMT2-224ENST00000556737 PRPS1P60891 318 aa9□□□□□ -0.97
SHMT2-224ENST00000556737 ARF1P84077 181 aaKnown RBP9□□□□□ -0.97
SHMT2-224ENST00000556737 CHRNB3Q05901 458 aa9□□□□□ -0.97
SHMT2-224ENST00000556737 C1DQ13901 141 aaKnown RBP9□□□□□ -0.97
SHMT2-224ENST00000556737 CEACAM16Q2WEN9 425 aa9□□□□□ -0.97
SHMT2-224ENST00000556737 CYBRD1Q53TN4 286 aa9□□□□□ -0.97
SHMT2-224ENST00000556737 ZFP1Q6P2D0 407 aa9□□□□□ -0.97
SHMT2-224ENST00000556737 ANKRD16Q6P6B7 361 aa9□□□□□ -0.97
SHMT2-224ENST00000556737 KLHL24Q6TFL4 600 aa9□□□□□ -0.97
SHMT2-224ENST00000556737 C20orf196Q8IYI0 205 aa9□□□□□ -0.97
SHMT2-224ENST00000556737 PIK3C3Q8NEB9 887 aa9□□□□□ -0.97
SHMT2-224ENST00000556737 OR5J2Q8NH18 312 aa9□□□□□ -0.97
SHMT2-224ENST00000556737 CANT1Q8WVQ1 401 aa9□□□□□ -0.97
SHMT2-224ENST00000556737 MPP4Q96JB8 637 aa9□□□□□ -0.97
SHMT2-224ENST00000556737 SLC38A2Q96QD8 506 aa9□□□□□ -0.97
SHMT2-224ENST00000556737 DHRS9Q9BPW9 319 aa9□□□□□ -0.97
SHMT2-224ENST00000556737 EMC6Q9BV81 110 aa9□□□□□ -0.97
SHMT2-224ENST00000556737 SLC19A3Q9BZV2 496 aa9□□□□□ -0.97
SHMT2-224ENST00000556737 FKRPQ9H9S5 495 aa9□□□□□ -0.97
SHMT2-224ENST00000556737 S100A14Q9HCY8 104 aa9□□□□□ -0.97
SHMT2-224ENST00000556737 MEPEQ9NQ76 525 aaPredicted RBP9□□□□□ -0.97
SHMT2-224ENST00000556737 GDF2Q9UK05 429 aaPredicted RBP9□□□□□ -0.97
SHMT2-224ENST00000556737 BAG5Q9UL15 447 aa9□□□□□ -0.97
SHMT2-224ENST00000556737 AP4S1Q9Y587 144 aa9□□□□□ -0.97
SHMT2-224ENST00000556737 NOX1Q9Y5S8 564 aa9□□□□□ -0.97
SHMT2-224ENST00000556737 CR1P17927 2039 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms