RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 NARFLQ9H6Q4 476 aa8.67□□□□□ -1.02
SCFD1-220ENST00000556486 LPAR2Q9HBW0 351 aa8.67□□□□□ -1.02
SCFD1-220ENST00000556486 AIG1Q9NVV5 245 aa8.67□□□□□ -1.02
SCFD1-220ENST00000556486 SLAMF8Q9P0V8 285 aa8.67□□□□□ -1.02
SCFD1-220ENST00000556486 MOKQ9UQ07 419 aa8.67□□□□□ -1.02
SCFD1-220ENST00000556486 PCDHGB1Q9Y5G3 927 aa8.67□□□□□ -1.02
SCFD1-220ENST00000556486 SNX13Q9Y5W8 968 aa8.67□□□□□ -1.02
SCFD1-220ENST00000556486 IGHV1-18A0A0C4DH31 117 aa8.66□□□□□ -1.02
SCFD1-220ENST00000556486 LOC390937A0A1W2PQ73 354 aa8.66□□□□□ -1.02
SCFD1-220ENST00000556486 A8MVM7 634 aa8.66□□□□□ -1.02
SCFD1-220ENST00000556486 B9A039 149 aa8.66□□□□□ -1.02
SCFD1-220ENST00000556486 LYNX1G3V0Z9 82 aa8.66□□□□□ -1.02
SCFD1-220ENST00000556486 RPL36A-HNRNPH2H7BZ11 118 aa8.66□□□□□ -1.02
SCFD1-220ENST00000556486 SLC16A6O15403 523 aa8.66□□□□□ -1.02
SCFD1-220ENST00000556486 FRS3O43559 492 aa8.66□□□□□ -1.02
SCFD1-220ENST00000556486 KRT75O95678 551 aa8.66□□□□□ -1.02
SCFD1-220ENST00000556486 IGKV3-15P01624 115 aa8.66□□□□□ -1.02
SCFD1-220ENST00000556486 ZCCHC18P0CG32 403 aa8.66□□□□□ -1.02
SCFD1-220ENST00000556486 LYNX1P0DP58 116 aa8.66□□□□□ -1.02
SCFD1-220ENST00000556486 CCNA2P20248 432 aa8.66□□□□□ -1.02
SCFD1-220ENST00000556486 IL12AP29459 219 aa8.66□□□□□ -1.02
SCFD1-220ENST00000556486 SERPINF1P36955 418 aa8.66□□□□□ -1.02
SCFD1-220ENST00000556486 CDKN2CP42773 168 aa8.66□□□□□ -1.02
SCFD1-220ENST00000556486 SH3BGRP55822 239 aaPredicted RBP8.66□□□□□ -1.02
SCFD1-220ENST00000556486 UFM1P61960 85 aa8.66□□□□□ -1.02
SCFD1-220ENST00000556486 SNRPD2P62316 118 aaKnown RBP8.66□□□□□ -1.02
SCFD1-220ENST00000556486 LGALS3BPQ08380 585 aa8.66□□□□□ -1.02
SCFD1-220ENST00000556486 IKZF1Q13422 519 aa8.66□□□□□ -1.02
SCFD1-220ENST00000556486 CEACAM7Q14002 265 aa8.66□□□□□ -1.02
SCFD1-220ENST00000556486 MIDNQ504T8 468 aa8.66□□□□□ -1.02
SCFD1-220ENST00000556486 LIN52Q52LA3 116 aa8.66□□□□□ -1.02
SCFD1-220ENST00000556486 WBP2NLQ6ICG8 309 aa8.66□□□□□ -1.02
SCFD1-220ENST00000556486 KLHL24Q6TFL4 600 aa8.66□□□□□ -1.02
SCFD1-220ENST00000556486 DEF8Q6ZN54 512 aa8.66□□□□□ -1.02
SCFD1-220ENST00000556486 CREB3L2Q70SY1 520 aa8.66□□□□□ -1.02
SCFD1-220ENST00000556486 AAED1Q7RTV5 226 aa8.66□□□□□ -1.02
SCFD1-220ENST00000556486 HMGN2P46Q86SG4 172 aa8.66□□□□□ -1.02
SCFD1-220ENST00000556486 PEG10Q86TG7 708 aaKnown RBP8.66□□□□□ -1.02
SCFD1-220ENST00000556486 PEX5LQ8IYB4 626 aa8.66□□□□□ -1.02
SCFD1-220ENST00000556486 TMEM99Q8N816 258 aa8.66□□□□□ -1.02
SCFD1-220ENST00000556486 LINC01356Q8N9X3 169 aa8.66□□□□□ -1.02
SCFD1-220ENST00000556486 ZNF540Q8NDQ6 660 aa8.66□□□□□ -1.02
SCFD1-220ENST00000556486 PPP1R36Q96LQ0 422 aa8.66□□□□□ -1.02
SCFD1-220ENST00000556486 SLC38A2Q96QD8 506 aa8.66□□□□□ -1.02
SCFD1-220ENST00000556486 LINC00470Q9BZP3 86 aa8.66□□□□□ -1.02
SCFD1-220ENST00000556486 CA10Q9NS85 328 aa8.66□□□□□ -1.02
SCFD1-220ENST00000556486 RLIMQ9NVW2 624 aa8.66□□□□□ -1.02
SCFD1-220ENST00000556486 TMEM45AQ9NWC5 275 aa8.66□□□□□ -1.02
SCFD1-220ENST00000556486 CALML5Q9NZT1 146 aa8.66□□□□□ -1.02
SCFD1-220ENST00000556486 VWFP04275 2813 aa8.66□□□□□ -1.02
SCFD1-220ENST00000556486 TMEM89A2RUT3 159 aa8.65□□□□□ -1.02
SCFD1-220ENST00000556486 NOTOA8MTQ0 251 aa8.65□□□□□ -1.02
SCFD1-220ENST00000556486 FTCDNL1E5RQL4 147 aa8.65□□□□□ -1.02
SCFD1-220ENST00000556486 ZNF587BE7ETH6 402 aa8.65□□□□□ -1.02
SCFD1-220ENST00000556486 SDHDO14521 159 aa8.65□□□□□ -1.02
SCFD1-220ENST00000556486 GSC2O15499 205 aa8.65□□□□□ -1.02
SCFD1-220ENST00000556486 AKR7A3O95154 331 aa8.65□□□□□ -1.02
SCFD1-220ENST00000556486 CRYAAP02489 173 aa8.65□□□□□ -1.02
SCFD1-220ENST00000556486 TFPTP0C1Z6 253 aa8.65□□□□□ -1.02
SCFD1-220ENST00000556486 NR2F1P10589 423 aa8.65□□□□□ -1.02
SCFD1-220ENST00000556486 CXCR1P25024 350 aa8.65□□□□□ -1.02
SCFD1-220ENST00000556486 GIFP27352 417 aa8.65□□□□□ -1.02
SCFD1-220ENST00000556486 PPOXP50336 477 aa8.65□□□□□ -1.02
SCFD1-220ENST00000556486 POU3F1Q03052 451 aaPredicted RBP8.65□□□□□ -1.02
SCFD1-220ENST00000556486 STX3Q13277 289 aa8.65□□□□□ -1.02
SCFD1-220ENST00000556486 OR7A5Q15622 319 aa8.65□□□□□ -1.02
SCFD1-220ENST00000556486 ADIPOQQ15848 244 aa8.65□□□□□ -1.02
SCFD1-220ENST00000556486 TBRG1Q3YBR2 411 aa8.65□□□□□ -1.02
SCFD1-220ENST00000556486 HIKESHIQ53FT3 197 aa8.65□□□□□ -1.02
SCFD1-220ENST00000556486 PRAMEF8Q5VWM4 474 aa8.65□□□□□ -1.02
SCFD1-220ENST00000556486 PRAMEF7Q5VXH5 474 aa8.65□□□□□ -1.02
SCFD1-220ENST00000556486 ANKRD16Q6P6B7 361 aa8.65□□□□□ -1.02
SCFD1-220ENST00000556486 C6orf89Q6UWU4 347 aa8.65□□□□□ -1.02
SCFD1-220ENST00000556486 MSANTD1Q6ZTZ1 278 aa8.65□□□□□ -1.02
SCFD1-220ENST00000556486 EPHX4Q8IUS5 362 aa8.65□□□□□ -1.02
SCFD1-220ENST00000556486 SVOPLQ8N434 492 aa8.65□□□□□ -1.02
SCFD1-220ENST00000556486 NUP37Q8NFH4 326 aa8.65□□□□□ -1.02
SCFD1-220ENST00000556486 OR1K1Q8NGR3 316 aa8.65□□□□□ -1.02
SCFD1-220ENST00000556486 OR52P1PQ8NH57 321 aa8.65□□□□□ -1.02
SCFD1-220ENST00000556486 MFSD8Q8NHS3 518 aa8.65□□□□□ -1.02
SCFD1-220ENST00000556486 BCL2L2Q92843 193 aaPredicted RBP8.65□□□□□ -1.02
SCFD1-220ENST00000556486 OR52E6Q96RD3 313 aa8.65□□□□□ -1.02
SCFD1-220ENST00000556486 NELFAQ9H3P2 528 aa8.65□□□□□ -1.02
SCFD1-220ENST00000556486 PLK3Q9H4B4 646 aa8.65□□□□□ -1.02
SCFD1-220ENST00000556486 ZNF442Q9H7R0 627 aa8.65□□□□□ -1.02
SCFD1-220ENST00000556486 ZMAT3Q9HA38 289 aaKnown RBP8.65□□□□□ -1.02
SCFD1-220ENST00000556486 THUMPD1Q9NXG2 353 aaKnown RBP8.65□□□□□ -1.02
SCFD1-220ENST00000556486 P2RX2Q9UBL9 471 aa8.65□□□□□ -1.02
SCFD1-220ENST00000556486 RCE1Q9Y256 329 aa8.65□□□□□ -1.02
SCFD1-220ENST00000556486 RASD1Q9Y272 281 aa8.65□□□□□ -1.02
SCFD1-220ENST00000556486 CHST2Q9Y4C5 530 aa8.65□□□□□ -1.02
SCFD1-220ENST00000556486 LOC102725191A0A1B0GVB3 256 aa8.64□□□□□ -1.03
SCFD1-220ENST00000556486 WDR91A4D1P6 747 aa8.64□□□□□ -1.03
SCFD1-220ENST00000556486 FAM157AC9JC47 383 aa8.64□□□□□ -1.03
SCFD1-220ENST00000556486 RFXANKO14593 260 aa8.64□□□□□ -1.03
SCFD1-220ENST00000556486 KLF11O14901 512 aa8.64□□□□□ -1.03
SCFD1-220ENST00000556486 HDAC3O15379 428 aa8.64□□□□□ -1.03
SCFD1-220ENST00000556486 RGS16O15492 202 aaPredicted RBP8.64□□□□□ -1.03
SCFD1-220ENST00000556486 SNNO75324 88 aaPredicted RBP8.64□□□□□ -1.03
SCFD1-220ENST00000556486 ZNF432O94892 652 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms