RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 ERMAPQ96PL5 475 aaPredicted RBP12.43□□□□□ -0.42
VIPAS39-208ENST00000556412 ALKBH3Q96Q83 286 aaPredicted RBP12.43□□□□□ -0.42
VIPAS39-208ENST00000556412 RBM4BQ9BQ04 359 aaKnown RBP12.43□□□□□ -0.42
VIPAS39-208ENST00000556412 C9orf16Q9BUW7 83 aa12.43□□□□□ -0.42
VIPAS39-208ENST00000556412 RBM4Q9BWF3 364 aaKnown RBP12.43□□□□□ -0.42
VIPAS39-208ENST00000556412 SLCO5A1Q9H2Y9 848 aa12.43□□□□□ -0.42
VIPAS39-208ENST00000556412 TXNIPQ9H3M7 391 aa12.43□□□□□ -0.42
VIPAS39-208ENST00000556412 KCNJ16Q9NPI9 418 aa12.43□□□□□ -0.42
VIPAS39-208ENST00000556412 STX18Q9P2W9 335 aaKnown RBP12.43□□□□□ -0.42
VIPAS39-208ENST00000556412 REV1Q9UBZ9 1251 aa12.43□□□□□ -0.42
VIPAS39-208ENST00000556412 NKX1-2Q9UD57 310 aaPredicted RBP12.43□□□□□ -0.42
VIPAS39-208ENST00000556412 TEX13CA0A0J9YWL9 993 aa12.42□□□□□ -0.42
VIPAS39-208ENST00000556412 M0R3G1 203 aa12.42□□□□□ -0.42
VIPAS39-208ENST00000556412 SOCS2O14508 198 aa12.42□□□□□ -0.42
VIPAS39-208ENST00000556412 MSTNO14793 375 aa12.42□□□□□ -0.42
VIPAS39-208ENST00000556412 CLDN14O95500 239 aa12.42□□□□□ -0.42
VIPAS39-208ENST00000556412 OSMP13725 252 aa12.42□□□□□ -0.42
VIPAS39-208ENST00000556412 RPS6KA3P51812 740 aa12.42□□□□□ -0.42
VIPAS39-208ENST00000556412 CLRN1P58418 232 aa12.42□□□□□ -0.42
VIPAS39-208ENST00000556412 RUNX1T1Q06455 604 aa12.42□□□□□ -0.42
VIPAS39-208ENST00000556412 FAPQ12884 760 aa12.42□□□□□ -0.42
VIPAS39-208ENST00000556412 DAG1Q14118 895 aa12.42□□□□□ -0.42
VIPAS39-208ENST00000556412 LPCAT4Q643R3 524 aa12.42□□□□□ -0.42
VIPAS39-208ENST00000556412 NHLRC1Q6VVB1 395 aa12.42□□□□□ -0.42
VIPAS39-208ENST00000556412 ZBTB49Q6ZSB9 765 aa12.42□□□□□ -0.42
VIPAS39-208ENST00000556412 HDDC2Q7Z4H3 204 aa12.42□□□□□ -0.42
VIPAS39-208ENST00000556412 GPR137CQ8N3F9 429 aa12.42□□□□□ -0.42
VIPAS39-208ENST00000556412 IQCF1Q8N6M8 205 aa12.42□□□□□ -0.42
VIPAS39-208ENST00000556412 SYT14Q8NB59 555 aa12.42□□□□□ -0.42
VIPAS39-208ENST00000556412 OR6X1Q8NH79 312 aa12.42□□□□□ -0.42
VIPAS39-208ENST00000556412 ASB10Q8WXI3 467 aa12.42□□□□□ -0.42
VIPAS39-208ENST00000556412 DNAJC9Q8WXX5 260 aa12.42□□□□□ -0.42
VIPAS39-208ENST00000556412 ZNF566Q969W8 418 aa12.42□□□□□ -0.42
VIPAS39-208ENST00000556412 RASD2Q96D21 266 aa12.42□□□□□ -0.42
VIPAS39-208ENST00000556412 Q96M85 177 aa12.42□□□□□ -0.42
VIPAS39-208ENST00000556412 ADAD1Q96M93 576 aaKnown RBP12.42□□□□□ -0.42
VIPAS39-208ENST00000556412 GPX7Q96SL4 187 aaPredicted RBP12.42□□□□□ -0.42
VIPAS39-208ENST00000556412 NRIP3Q9NQ35 241 aa12.42□□□□□ -0.42
VIPAS39-208ENST00000556412 SLC7A10Q9NS82 523 aa12.42□□□□□ -0.42
VIPAS39-208ENST00000556412 IL20Q9NYY1 176 aa12.42□□□□□ -0.42
VIPAS39-208ENST00000556412 ORC6Q9Y5N6 252 aa12.42□□□□□ -0.42
VIPAS39-208ENST00000556412 RP1L1Q8IWN7 2480 aaPredicted RBP12.42□□□□□ -0.42
VIPAS39-208ENST00000556412 POLEQ07864 2286 aa12.42□□□□□ -0.42
VIPAS39-208ENST00000556412 H7C1C5 153 aa12.41□□□□□ -0.42
VIPAS39-208ENST00000556412 XKRYO14609 159 aa12.41□□□□□ -0.42
VIPAS39-208ENST00000556412 ARHGEF9O43307 516 aa12.41□□□□□ -0.42
VIPAS39-208ENST00000556412 UPK3AO75631 287 aa12.41□□□□□ -0.42
VIPAS39-208ENST00000556412 ZNF432O94892 652 aa12.41□□□□□ -0.42
VIPAS39-208ENST00000556412 IGHG1P01857 330 aa12.41□□□□□ -0.42
VIPAS39-208ENST00000556412 AGAP20933 346 aa12.41□□□□□ -0.42
VIPAS39-208ENST00000556412 PEX2P28328 305 aa12.41□□□□□ -0.42
VIPAS39-208ENST00000556412 CSNK1A1P48729 337 aa12.41□□□□□ -0.42
VIPAS39-208ENST00000556412 LCN6P62502 163 aa12.41□□□□□ -0.42
VIPAS39-208ENST00000556412 PPP2R2BQ00005 443 aa12.41□□□□□ -0.42
VIPAS39-208ENST00000556412 SLC35F1Q5T1Q4 408 aa12.41□□□□□ -0.42
VIPAS39-208ENST00000556412 ARMC4Q5T2S8 1044 aa12.41□□□□□ -0.42
VIPAS39-208ENST00000556412 C9orf135Q5VTT2 229 aa12.41□□□□□ -0.42
VIPAS39-208ENST00000556412 FBXW9Q5XUX1 488 aa12.41□□□□□ -0.42
VIPAS39-208ENST00000556412 KDM4DQ6B0I6 523 aa12.41□□□□□ -0.42
VIPAS39-208ENST00000556412 TMEM123Q8N131 208 aa12.41□□□□□ -0.42
VIPAS39-208ENST00000556412 CLDN22Q8N7P3 220 aa12.41□□□□□ -0.42
VIPAS39-208ENST00000556412 OR2T33Q8NG76 320 aa12.41□□□□□ -0.42
VIPAS39-208ENST00000556412 SLC25A44Q96H78 314 aaPredicted RBP12.41□□□□□ -0.42
VIPAS39-208ENST00000556412 RBM24Q9BX46 236 aaKnown RBP12.41□□□□□ -0.42
VIPAS39-208ENST00000556412 OSBPL10Q9BXB5 764 aa12.41□□□□□ -0.42
VIPAS39-208ENST00000556412 RIBC2Q9H4K1 309 aa12.41□□□□□ -0.42
VIPAS39-208ENST00000556412 RNPEPL1Q9HAU8 725 aa12.41□□□□□ -0.42
VIPAS39-208ENST00000556412 A8MXE2 369 aa12.41□□□□□ -0.42
VIPAS39-208ENST00000556412 IGHMP01871 453 aa12.41□□□□□ -0.42
VIPAS39-208ENST00000556412 TP53P04637 393 aaPredicted RBP12.41□□□□□ -0.42
VIPAS39-208ENST00000556412 ACADSP16219 412 aa12.41□□□□□ -0.42
VIPAS39-208ENST00000556412 CDH2P19022 906 aaPredicted RBP12.41□□□□□ -0.42
VIPAS39-208ENST00000556412 SDHAP31040 664 aa12.41□□□□□ -0.42
VIPAS39-208ENST00000556412 ASCL1P50553 236 aa12.41□□□□□ -0.42
VIPAS39-208ENST00000556412 ALDH3A2P51648 485 aa12.41□□□□□ -0.42
VIPAS39-208ENST00000556412 SLC34A1Q06495 639 aa12.41□□□□□ -0.42
VIPAS39-208ENST00000556412 CD47Q08722 323 aa12.41□□□□□ -0.42
VIPAS39-208ENST00000556412 KRR1Q13601 381 aaKnown RBP12.41□□□□□ -0.42
VIPAS39-208ENST00000556412 ZNF474Q6S9Z5 364 aaPredicted RBP12.41□□□□□ -0.42
VIPAS39-208ENST00000556412 BEND4Q6ZU67 534 aa12.41□□□□□ -0.42
VIPAS39-208ENST00000556412 GALNT4Q8N4A0 578 aa12.41□□□□□ -0.42
VIPAS39-208ENST00000556412 ARIH2OSQ8N7S6 290 aa12.41□□□□□ -0.42
VIPAS39-208ENST00000556412 POMGNT2Q8NAT1 580 aa12.41□□□□□ -0.42
VIPAS39-208ENST00000556412 ULBP2Q9BZM5 246 aa12.41□□□□□ -0.42
VIPAS39-208ENST00000556412 ASB6Q9NWX5 421 aa12.41□□□□□ -0.42
VIPAS39-208ENST00000556412 TMEFF2Q9UIK5 374 aaPredicted RBP12.41□□□□□ -0.42
VIPAS39-208ENST00000556412 A6NIZ1 184 aa12.4□□□□□ -0.42
VIPAS39-208ENST00000556412 NPIPB13A6NJU9 1138 aa12.4□□□□□ -0.42
VIPAS39-208ENST00000556412 NPIPB4C9JG80 1138 aa12.4□□□□□ -0.42
VIPAS39-208ENST00000556412 TRMUO75648 421 aaKnown RBP12.4□□□□□ -0.42
VIPAS39-208ENST00000556412 ALPLP05186 524 aa12.4□□□□□ -0.42
VIPAS39-208ENST00000556412 RAP1BP61224 184 aa12.4□□□□□ -0.42
VIPAS39-208ENST00000556412 RAP1AP62834 184 aa12.4□□□□□ -0.42
VIPAS39-208ENST00000556412 MYBPC1Q00872 1141 aa12.4□□□□□ -0.42
VIPAS39-208ENST00000556412 MESTQ5EB52 335 aa12.4□□□□□ -0.42
VIPAS39-208ENST00000556412 TMEM236Q5W0B7 351 aa12.4□□□□□ -0.42
VIPAS39-208ENST00000556412 FAM205BPQ63HN1 556 aa12.4□□□□□ -0.42
VIPAS39-208ENST00000556412 GPR139Q6DWJ6 353 aa12.4□□□□□ -0.42
VIPAS39-208ENST00000556412 FAM122BQ7Z309 247 aa12.4□□□□□ -0.42
VIPAS39-208ENST00000556412 JAZF1Q86VZ6 243 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms