RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 METTL17Q9H7H0 456 aaPredicted RBP6.37□□□□□ -1.39
TDP1-213ENST00000555880 NOX3Q9HBY0 568 aa6.37□□□□□ -1.39
TDP1-213ENST00000555880 MMP25Q9NPA2 562 aa6.37□□□□□ -1.39
TDP1-213ENST00000555880 EXOSC3Q9NQT5 275 aaKnown RBP6.37□□□□□ -1.39
TDP1-213ENST00000555880 C2orf42Q9NWW7 574 aa6.37□□□□□ -1.39
TDP1-213ENST00000555880 PGPEP1Q9NXJ5 209 aa6.37□□□□□ -1.39
TDP1-213ENST00000555880 MRPL15Q9P015 296 aaKnown RBP6.37□□□□□ -1.39
TDP1-213ENST00000555880 ZNF69Q9UC07 566 aa6.37□□□□□ -1.39
TDP1-213ENST00000555880 FOXJ3Q9UPW0 622 aa6.37□□□□□ -1.39
TDP1-213ENST00000555880 NUP210LQ5VU65 1888 aa6.37□□□□□ -1.39
TDP1-213ENST00000555880 IGKV1D-42A0A075B6H8 117 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 ANKRD20A5PA0PJZ0 165 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 FIGNL2A6NMB9 653 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 TMEM212A6NML5 194 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 HSPB2A8KAH6 182 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 C17orf105B2RV13 164 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 IDSB3KWA1 339 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 M0R233 179 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 XKRYO14609 159 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 ARPC1BO15143 372 aaKnown RBP6.36□□□□□ -1.39
TDP1-213ENST00000555880 ZNF264O43296 627 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 FOXS1O43638 330 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 CTSBP07858 339 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 ADRB1P08588 477 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 SPTBP11277 2137 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 CDK2P24941 298 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 ADH7P40394 386 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 MNDAP41218 407 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 SLC6A8P48029 635 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 SOX2P48431 317 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 P2RX1P51575 399 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 BLVRAP53004 296 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 AP2S1P53680 142 aaPredicted RBP6.36□□□□□ -1.39
TDP1-213ENST00000555880 EPHA4P54764 986 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 CLDN12P56749 244 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 TFF2Q03403 129 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 EIF2B5Q13144 721 aaKnown RBP6.36□□□□□ -1.39
TDP1-213ENST00000555880 SRSF5Q13243 272 aaKnown RBP6.36□□□□□ -1.39
TDP1-213ENST00000555880 SKP2Q13309 424 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 C1orf61Q13536 156 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 ERV3-1Q14264 604 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 FZD2Q14332 565 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 GRM7Q14831 915 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 HSPB2Q16082 182 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 LINC01590Q5TEZ4 76 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 LIPNQ5VXI9 398 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 OLFML2AQ68BL7 652 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 KIAA0895LQ68EN5 471 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 GPR139Q6DWJ6 353 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 STAC2Q6ZMT1 411 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 NLRC3Q7RTR2 1065 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 ATG4DQ86TL0 474 aaPredicted RBP6.36□□□□□ -1.39
TDP1-213ENST00000555880 CDC20BQ86Y33 519 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 FTMTQ8N4E7 242 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 ZNF615Q8N8J6 731 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 C7orf57Q8NEG2 295 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 OR11H4Q8NGC9 324 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 RGP1Q92546 391 aaPredicted RBP6.36□□□□□ -1.39
TDP1-213ENST00000555880 ORAI1Q96D31 301 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 HAVCR1Q96D42 359 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 GFI1Q99684 422 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 TSPAN10Q9H1Z9 355 aaPredicted RBP6.36□□□□□ -1.39
TDP1-213ENST00000555880 WDR76Q9H967 626 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 SRA1Q9HD15 236 aaKnown RBP6.36□□□□□ -1.39
TDP1-213ENST00000555880 SOHLH2Q9NX45 425 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 TAS2R8Q9NYW2 309 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 MGAT4CQ9UBM8 478 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 OR5V1Q9UGF6 321 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 MMP17Q9ULZ9 603 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 PLCL2Q9UPR0 1127 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 MAB21L2Q9Y586 359 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 NPTNQ9Y639 398 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 CACNA1IQ9P0X4 2223 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 KNL1Q8NG31 2342 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 CEP290O15078 2479 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 CDH23Q9H251 3354 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 UBE2QL1A1L167 161 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 GMDSO60547 372 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 ZNF254O75437 659 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 TOXO94900 526 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 UTS2O95399 124 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 IL33O95760 270 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 TXNDC12O95881 172 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 HPXP02790 462 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 F13BP05160 661 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 IGHV4-34P06331 123 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 PROS1P07225 676 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 SYPP08247 313 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 GIPP09681 153 aaPredicted RBP6.36□□□□□ -1.39
TDP1-213ENST00000555880 CPN1P15169 458 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 IGFBP4P22692 258 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 CXCR1P25024 350 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 SSTR2P30874 369 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 RORAP35398 523 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 PPICP45877 212 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 CAPZBP47756 277 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 PTH2RP49190 550 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 TAS2R20P59543 309 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 ZP1P60852 638 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 RAP2BP61225 183 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms