RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 NIPSNAP1Q9BPW8 284 aa8.54□□□□□ -1.04
ACTN1-215ENST00000555616 MED18Q9BUE0 208 aa8.54□□□□□ -1.04
ACTN1-215ENST00000555616 ASPNQ9BXN1 380 aa8.54□□□□□ -1.04
ACTN1-215ENST00000555616 RIBC2Q9H4K1 309 aa8.54□□□□□ -1.04
ACTN1-215ENST00000555616 BCO1Q9HAY6 547 aa8.54□□□□□ -1.04
ACTN1-215ENST00000555616 NANSQ9NR45 359 aa8.54□□□□□ -1.04
ACTN1-215ENST00000555616 ZNF226Q9NYT6 803 aa8.54□□□□□ -1.04
ACTN1-215ENST00000555616 KLHL9Q9P2J3 617 aa8.54□□□□□ -1.04
ACTN1-215ENST00000555616 ING1Q9UK53 422 aaPredicted RBP8.54□□□□□ -1.04
ACTN1-215ENST00000555616 ITGB1BP2Q9UKP3 347 aa8.54□□□□□ -1.04
ACTN1-215ENST00000555616 CORINQ9Y5Q5 1042 aa8.54□□□□□ -1.04
ACTN1-215ENST00000555616 A0A1W2PNR3 127 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 A0A1W2PPR1 153 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 DEFB108AA8MXU0 73 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 CDC42EP2O14613 210 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 SIAH2O43255 324 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 DENRO43583 198 aaKnown RBP8.53□□□□□ -1.04
ACTN1-215ENST00000555616 CYTIPO60759 359 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 MITFO75030 526 aaPredicted RBP8.53□□□□□ -1.04
ACTN1-215ENST00000555616 SNAP29O95721 258 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 PPP3CBP16298 524 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 FUT1P19526 365 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 KLK2P20151 261 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 PSMB1P20618 241 aaKnown RBP8.53□□□□□ -1.04
ACTN1-215ENST00000555616 ENPP1P22413 925 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 CRYGSP22914 178 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 DIO1P49895 249 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 MED21Q13503 144 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 TMEM201Q5SNT2 666 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 ANKRD34AQ69YU3 496 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 TFAP2EQ6VUC0 442 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 STAC2Q6ZMT1 411 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 ZNF620Q6ZNG0 422 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 TMPPEQ6ZT21 453 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 BEND4Q6ZU67 534 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 SLC46A3Q7Z3Q1 461 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 MEX3DQ86XN8 651 aaKnown RBP8.53□□□□□ -1.04
ACTN1-215ENST00000555616 TUSC5Q8IXB3 177 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 DHRSXQ8N5I4 330 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 SCAIQ8N9R8 606 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 OR52L1Q8NGH7 329 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 OR13C2Q8NGS9 318 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 TEX47Q8TBZ9 253 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 CYGBQ8WWM9 190 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 LIPHQ8WWY8 451 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 SLC25A36Q96CQ1 311 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 ZHX1-C8orf76Q96EF9 292 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 NR1H4Q96RI1 486 aaPredicted RBP8.53□□□□□ -1.04
ACTN1-215ENST00000555616 GPA33Q99795 319 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 FOXC2Q99958 501 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 PTDSS2Q9BVG9 487 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 TEX12Q9BXU0 123 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 GABARAPL3Q9BY60 117 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 OR10A4Q9H209 315 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 CXXC4Q9H2H0 198 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 LIME1Q9H400 295 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 TOR3AQ9H497 397 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 PLEKHF2Q9H8W4 249 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 FANCFQ9NPI8 374 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 TRAPPC4Q9Y296 219 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 CDH10Q9Y6N8 788 aa8.53□□□□□ -1.04
ACTN1-215ENST00000555616 IGKV3D-15A0A087WSY6 115 aa8.52□□□□□ -1.05
ACTN1-215ENST00000555616 IGHV3-15A0A0B4J1V0 119 aa8.52□□□□□ -1.05
ACTN1-215ENST00000555616 LIPT2A6NK58 231 aa8.52□□□□□ -1.05
ACTN1-215ENST00000555616 ZNF724A8MTY0 619 aa8.52□□□□□ -1.05
ACTN1-215ENST00000555616 H0YAE9 185 aa8.52□□□□□ -1.05
ACTN1-215ENST00000555616 SULT2B1O00204 365 aa8.52□□□□□ -1.05
ACTN1-215ENST00000555616 CASKO14936 926 aa8.52□□□□□ -1.05
ACTN1-215ENST00000555616 EIF1BO60739 113 aaKnown RBP8.52□□□□□ -1.05
ACTN1-215ENST00000555616 NDUFB2O95178 105 aa8.52□□□□□ -1.05
ACTN1-215ENST00000555616 OR6A2O95222 327 aa8.52□□□□□ -1.05
ACTN1-215ENST00000555616 ATE1O95260 518 aa8.52□□□□□ -1.05
ACTN1-215ENST00000555616 SOX14O95416 240 aa8.52□□□□□ -1.05
ACTN1-215ENST00000555616 PMS2P2O95744 297 aa8.52□□□□□ -1.05
ACTN1-215ENST00000555616 BGLAPP02818 100 aa8.52□□□□□ -1.05
ACTN1-215ENST00000555616 RAF1P04049 648 aa8.52□□□□□ -1.05
ACTN1-215ENST00000555616 THBDP07204 575 aa8.52□□□□□ -1.05
ACTN1-215ENST00000555616 YES1P07947 543 aa8.52□□□□□ -1.05
ACTN1-215ENST00000555616 POU1F1P28069 291 aa8.52□□□□□ -1.05
ACTN1-215ENST00000555616 GRPRP30550 384 aa8.52□□□□□ -1.05
ACTN1-215ENST00000555616 SLC6A6P31641 620 aa8.52□□□□□ -1.05
ACTN1-215ENST00000555616 ART1P52961 327 aa8.52□□□□□ -1.05
ACTN1-215ENST00000555616 CRISP1P54107 249 aa8.52□□□□□ -1.05
ACTN1-215ENST00000555616 OR2B6P58173 313 aa8.52□□□□□ -1.05
ACTN1-215ENST00000555616 PRPS1P60891 318 aa8.52□□□□□ -1.05
ACTN1-215ENST00000555616 SLC35A1P78382 337 aa8.52□□□□□ -1.05
ACTN1-215ENST00000555616 NPRL3Q12980 569 aa8.52□□□□□ -1.05
ACTN1-215ENST00000555616 PMS2P3Q13401 168 aa8.52□□□□□ -1.05
ACTN1-215ENST00000555616 PDK3Q15120 406 aa8.52□□□□□ -1.05
ACTN1-215ENST00000555616 POU4F3Q15319 338 aa8.52□□□□□ -1.05
ACTN1-215ENST00000555616 OR7A5Q15622 319 aa8.52□□□□□ -1.05
ACTN1-215ENST00000555616 KRTAP21-3Q3LHN1 58 aa8.52□□□□□ -1.05
ACTN1-215ENST00000555616 ZIK1Q3SY52 487 aaPredicted RBP8.52□□□□□ -1.05
ACTN1-215ENST00000555616 SLC36A3Q495N2 470 aa8.52□□□□□ -1.05
ACTN1-215ENST00000555616 ZBED5Q49AG3 693 aa8.52□□□□□ -1.05
ACTN1-215ENST00000555616 TTC23Q5W5X9 447 aa8.52□□□□□ -1.05
ACTN1-215ENST00000555616 SMARCD3Q6STE5 483 aa8.52□□□□□ -1.05
ACTN1-215ENST00000555616 C22orf34Q6ZV56 151 aa8.52□□□□□ -1.05
ACTN1-215ENST00000555616 NUFIP2Q7Z417 695 aaKnown RBP8.52□□□□□ -1.05
ACTN1-215ENST00000555616 GABRG1Q8N1C3 465 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms