RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 MSX2P35548 267 aaPredicted RBP11.99□□□□□ -0.49
SHMT2-219ENST00000555563 MNAT1P51948 309 aa11.99□□□□□ -0.49
SHMT2-219ENST00000555563 CDH11P55287 796 aa11.99□□□□□ -0.49
SHMT2-219ENST00000555563 UBE2NP61088 152 aaKnown RBP11.99□□□□□ -0.49
SHMT2-219ENST00000555563 TUBA1BP68363 451 aa11.99□□□□□ -0.49
SHMT2-219ENST00000555563 TUBA4AP68366 448 aa11.99□□□□□ -0.49
SHMT2-219ENST00000555563 C1QTNF12Q5T7M4 302 aa11.99□□□□□ -0.49
SHMT2-219ENST00000555563 TUBA1AQ71U36 451 aa11.99□□□□□ -0.49
SHMT2-219ENST00000555563 MEX3DQ86XN8 651 aaKnown RBP11.99□□□□□ -0.49
SHMT2-219ENST00000555563 KRTAP1-3Q8IUG1 177 aa11.99□□□□□ -0.49
SHMT2-219ENST00000555563 OR6N1Q8NGY5 312 aa11.99□□□□□ -0.49
SHMT2-219ENST00000555563 OR6X1Q8NH79 312 aa11.99□□□□□ -0.49
SHMT2-219ENST00000555563 MAGEE2Q8TD90 523 aaPredicted RBP11.99□□□□□ -0.49
SHMT2-219ENST00000555563 LIPHQ8WWY8 451 aa11.99□□□□□ -0.49
SHMT2-219ENST00000555563 ADAD1Q96M93 576 aaKnown RBP11.99□□□□□ -0.49
SHMT2-219ENST00000555563 ULBP2Q9BZM5 246 aa11.99□□□□□ -0.49
SHMT2-219ENST00000555563 GORASP2Q9H8Y8 452 aa11.99□□□□□ -0.49
SHMT2-219ENST00000555563 ADAM21Q9UKJ8 722 aa11.99□□□□□ -0.49
SHMT2-219ENST00000555563 DSCAMO60469 2012 aa11.99□□□□□ -0.49
SHMT2-219ENST00000555563 ZNF99A8MXY4 864 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-219ENST00000555563 hCG_2039718K7EN88 272 aa11.98□□□□□ -0.49
SHMT2-219ENST00000555563 F13BP05160 661 aa11.98□□□□□ -0.49
SHMT2-219ENST00000555563 SOD3P08294 240 aa11.98□□□□□ -0.49
SHMT2-219ENST00000555563 TSPAN19P0C672 248 aa11.98□□□□□ -0.49
SHMT2-219ENST00000555563 AQP2P41181 271 aa11.98□□□□□ -0.49
SHMT2-219ENST00000555563 CSNK1A1P48729 337 aa11.98□□□□□ -0.49
SHMT2-219ENST00000555563 SLC22A25Q6T423 547 aa11.98□□□□□ -0.49
SHMT2-219ENST00000555563 B3GLCTQ6Y288 498 aa11.98□□□□□ -0.49
SHMT2-219ENST00000555563 CYP4Z1Q86W10 505 aa11.98□□□□□ -0.49
SHMT2-219ENST00000555563 NRMQ8IXM6 262 aa11.98□□□□□ -0.49
SHMT2-219ENST00000555563 MOSPD2Q8NHP6 518 aa11.98□□□□□ -0.49
SHMT2-219ENST00000555563 TMEM171Q8WVE6 324 aa11.98□□□□□ -0.49
SHMT2-219ENST00000555563 BPIFA2Q96DR5 249 aa11.98□□□□□ -0.49
SHMT2-219ENST00000555563 PERPQ96FX8 193 aa11.98□□□□□ -0.49
SHMT2-219ENST00000555563 LRR1Q96L50 414 aa11.98□□□□□ -0.49
SHMT2-219ENST00000555563 NMNAT1Q9HAN9 279 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-219ENST00000555563 B3GAT2Q9NPZ5 323 aa11.98□□□□□ -0.49
SHMT2-219ENST00000555563 NDUFAF4Q9P032 175 aa11.98□□□□□ -0.49
SHMT2-219ENST00000555563 MGAT4BQ9UQ53 548 aa11.98□□□□□ -0.49
SHMT2-219ENST00000555563 A0A087WUU8 490 aa11.97□□□□□ -0.49
SHMT2-219ENST00000555563 ZNF503-AS2A6NEH8 195 aa11.97□□□□□ -0.49
SHMT2-219ENST00000555563 BCL10O95999 233 aa11.97□□□□□ -0.49
SHMT2-219ENST00000555563 SEMG1P04279 462 aa11.97□□□□□ -0.49
SHMT2-219ENST00000555563 DANCRP0C864 163 aa11.97□□□□□ -0.49
SHMT2-219ENST00000555563 SAGP10523 405 aaPredicted RBP11.97□□□□□ -0.49
SHMT2-219ENST00000555563 MAKP20794 623 aa11.97□□□□□ -0.49
SHMT2-219ENST00000555563 RPS4XP62701 263 aaKnown RBP11.97□□□□□ -0.49
SHMT2-219ENST00000555563 ADAM8P78325 824 aa11.97□□□□□ -0.49
SHMT2-219ENST00000555563 VLDLRP98155 873 aa11.97□□□□□ -0.49
SHMT2-219ENST00000555563 PGGHGQ32M88 737 aa11.97□□□□□ -0.49
SHMT2-219ENST00000555563 ZNF730Q6ZMV8 503 aa11.97□□□□□ -0.49
SHMT2-219ENST00000555563 TGIF2LYQ8IUE0 185 aa11.97□□□□□ -0.49
SHMT2-219ENST00000555563 WFDC11Q8NEX6 87 aa11.97□□□□□ -0.49
SHMT2-219ENST00000555563 OR13C2Q8NGS9 318 aa11.97□□□□□ -0.49
SHMT2-219ENST00000555563 SMAP2Q8WU79 429 aaPredicted RBP11.97□□□□□ -0.49
SHMT2-219ENST00000555563 ACOT11Q8WXI4 607 aaPredicted RBP11.97□□□□□ -0.49
SHMT2-219ENST00000555563 TMEM54Q969K7 222 aa11.97□□□□□ -0.49
SHMT2-219ENST00000555563 ZNF566Q969W8 418 aa11.97□□□□□ -0.49
SHMT2-219ENST00000555563 SLC25A44Q96H78 314 aaPredicted RBP11.97□□□□□ -0.49
SHMT2-219ENST00000555563 NSL1Q96IY1 281 aa11.97□□□□□ -0.49
SHMT2-219ENST00000555563 RADILQ96JH8 1075 aa11.97□□□□□ -0.49
SHMT2-219ENST00000555563 C7orf34Q96L11 122 aa11.97□□□□□ -0.49
SHMT2-219ENST00000555563 NSMCE2Q96MF7 247 aa11.97□□□□□ -0.49
SHMT2-219ENST00000555563 ANKRD19PQ9H560 264 aa11.97□□□□□ -0.49
SHMT2-219ENST00000555563 INIPQ9NRY2 104 aa11.97□□□□□ -0.49
SHMT2-219ENST00000555563 CISD1Q9NZ45 108 aaKnown RBP11.97□□□□□ -0.49
SHMT2-219ENST00000555563 POU2F3Q9UKI9 436 aa11.97□□□□□ -0.49
SHMT2-219ENST00000555563 LAMP3Q9UQV4 416 aa11.97□□□□□ -0.49
SHMT2-219ENST00000555563 HIF3AQ9Y2N7 669 aa11.97□□□□□ -0.49
SHMT2-219ENST00000555563 ROS1P08922 2347 aa11.97□□□□□ -0.49
SHMT2-219ENST00000555563 CADP27708 2225 aa11.96□□□□□ -0.49
SHMT2-219ENST00000555563 IGHV1-18A0A0C4DH31 117 aa11.96□□□□□ -0.49
SHMT2-219ENST00000555563 A0A1W2PRG6 482 aa11.96□□□□□ -0.49
SHMT2-219ENST00000555563 HTR3EA5X5Y0 456 aa11.96□□□□□ -0.49
SHMT2-219ENST00000555563 B2RBV5 119 aa11.96□□□□□ -0.49
SHMT2-219ENST00000555563 MCIDASD6RGH6 385 aa11.96□□□□□ -0.49
SHMT2-219ENST00000555563 ATP6V1G2-DDX39BF2Z307 99 aa11.96□□□□□ -0.49
SHMT2-219ENST00000555563 DIRAS1O95057 198 aa11.96□□□□□ -0.49
SHMT2-219ENST00000555563 IGHG1P01857 330 aa11.96□□□□□ -0.49
SHMT2-219ENST00000555563 H1F0P07305 194 aaKnown RBP11.96□□□□□ -0.49
SHMT2-219ENST00000555563 PGA4P0DJD7 388 aa11.96□□□□□ -0.49
SHMT2-219ENST00000555563 PGA3P0DJD8 388 aa11.96□□□□□ -0.49
SHMT2-219ENST00000555563 T-ENOLP0DO92 83 aa11.96□□□□□ -0.49
SHMT2-219ENST00000555563 B4GALT1P15291 398 aa11.96□□□□□ -0.49
SHMT2-219ENST00000555563 RHCEP18577 417 aa11.96□□□□□ -0.49
SHMT2-219ENST00000555563 CALB2P22676 271 aa11.96□□□□□ -0.49
SHMT2-219ENST00000555563 GPR4P46093 362 aa11.96□□□□□ -0.49
SHMT2-219ENST00000555563 PTH2RP49190 550 aa11.96□□□□□ -0.49
SHMT2-219ENST00000555563 DAP3P51398 398 aaKnown RBP11.96□□□□□ -0.49
SHMT2-219ENST00000555563 NKX6-1P78426 367 aaPredicted RBP11.96□□□□□ -0.49
SHMT2-219ENST00000555563 PRKCDQ05655 676 aa11.96□□□□□ -0.49
SHMT2-219ENST00000555563 RUNX1T1Q06455 604 aa11.96□□□□□ -0.49
SHMT2-219ENST00000555563 SPATS1Q496A3 300 aa11.96□□□□□ -0.49
SHMT2-219ENST00000555563 Q5PR19 223 aa11.96□□□□□ -0.49
SHMT2-219ENST00000555563 TBPL2Q6SJ96 375 aa11.96□□□□□ -0.49
SHMT2-219ENST00000555563 ZNF813Q6ZN06 617 aa11.96□□□□□ -0.49
SHMT2-219ENST00000555563 MBOAT2Q6ZWT7 520 aa11.96□□□□□ -0.49
SHMT2-219ENST00000555563 LRRC75A-AS1Q8N1F1 130 aa11.96□□□□□ -0.49
SHMT2-219ENST00000555563 NOXO1Q8NFA2 376 aa11.96□□□□□ -0.49
SHMT2-219ENST00000555563 SLC7A13Q8TCU3 470 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms