RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 TMCC2O75069 709 aa17.88■□□□□ 0.45
VTI1B-205ENST00000555543 IFNW1P05000 195 aa17.88■□□□□ 0.45
VTI1B-205ENST00000555543 CDKN1AP38936 164 aa17.88■□□□□ 0.45
VTI1B-205ENST00000555543 UBE2NP61088 152 aaKnown RBP17.88■□□□□ 0.45
VTI1B-205ENST00000555543 DTX2Q86UW9 622 aa17.88■□□□□ 0.45
VTI1B-205ENST00000555543 GEMIN6Q8WXD5 167 aaKnown RBP17.88■□□□□ 0.45
VTI1B-205ENST00000555543 FAM162AQ96A26 154 aa17.88■□□□□ 0.45
VTI1B-205ENST00000555543 SGTBQ96EQ0 304 aa17.88■□□□□ 0.45
VTI1B-205ENST00000555543 SEC61A2Q9H9S3 476 aa17.88■□□□□ 0.45
VTI1B-205ENST00000555543 ADA2Q9NZK5 511 aa17.88■□□□□ 0.45
VTI1B-205ENST00000555543 EGFL7Q9UHF1 273 aa17.88■□□□□ 0.45
VTI1B-205ENST00000555543 POU2F3Q9UKI9 436 aa17.88■□□□□ 0.45
VTI1B-205ENST00000555543 ZNF726A6NNF4 738 aa17.87■□□□□ 0.45
VTI1B-205ENST00000555543 ZNF99A8MXY4 864 aaPredicted RBP17.87■□□□□ 0.45
VTI1B-205ENST00000555543 BLOC1S5-TXNDC5H3BN57 136 aa17.87■□□□□ 0.45
VTI1B-205ENST00000555543 IGF2P01344 180 aa17.87■□□□□ 0.45
VTI1B-205ENST00000555543 HIST1H2ABP04908 130 aa17.87■□□□□ 0.45
VTI1B-205ENST00000555543 FUT1P19526 365 aa17.87■□□□□ 0.45
VTI1B-205ENST00000555543 RPL18Q07020 188 aaKnown RBP17.87■□□□□ 0.45
VTI1B-205ENST00000555543 ST3GAL3Q11203 375 aa17.87■□□□□ 0.45
VTI1B-205ENST00000555543 IFI44LQ53G44 452 aa17.87■□□□□ 0.45
VTI1B-205ENST00000555543 PRSS57Q6UWY2 283 aa17.87■□□□□ 0.45
VTI1B-205ENST00000555543 HIST3H2AQ7L7L0 130 aa17.87■□□□□ 0.45
VTI1B-205ENST00000555543 TSEN54Q7Z6J9 526 aaKnown RBP17.87■□□□□ 0.45
VTI1B-205ENST00000555543 MYPOPQ86VE0 399 aaPredicted RBP17.87■□□□□ 0.45
VTI1B-205ENST00000555543 OFCC1Q8IZS5 231 aa17.87■□□□□ 0.45
VTI1B-205ENST00000555543 FAM156AQ8NDB6 213 aa17.87■□□□□ 0.45
VTI1B-205ENST00000555543 OR6N1Q8NGY5 312 aa17.87■□□□□ 0.45
VTI1B-205ENST00000555543 HIST1H2ACQ93077 130 aa17.87■□□□□ 0.45
VTI1B-205ENST00000555543 Q96MF0 132 aa17.87■□□□□ 0.45
VTI1B-205ENST00000555543 HS6ST2Q96MM7 605 aa17.87■□□□□ 0.45
VTI1B-205ENST00000555543 SLC38A2Q96QD8 506 aa17.87■□□□□ 0.45
VTI1B-205ENST00000555543 ULBP2Q9BZM5 246 aa17.87■□□□□ 0.45
VTI1B-205ENST00000555543 CRNNQ9UBG3 495 aaPredicted RBP17.87■□□□□ 0.45
VTI1B-205ENST00000555543 MOKQ9UQ07 419 aa17.87■□□□□ 0.45
VTI1B-205ENST00000555543 MED31Q9Y3C7 131 aa17.87■□□□□ 0.45
VTI1B-205ENST00000555543 ZFHX3Q15911 3703 aa17.87■□□□□ 0.45
VTI1B-205ENST00000555543 ZANQ9Y493 2812 aa17.86■□□□□ 0.45
VTI1B-205ENST00000555543 PRSS23O95084 383 aa17.86■□□□□ 0.45
VTI1B-205ENST00000555543 F13BP05160 661 aa17.86■□□□□ 0.45
VTI1B-205ENST00000555543 CSNK1A1P48729 337 aa17.86■□□□□ 0.45
VTI1B-205ENST00000555543 ATP5J2P56134 94 aa17.86■□□□□ 0.45
VTI1B-205ENST00000555543 FKBP9P1Q75LS8 142 aa17.86■□□□□ 0.45
VTI1B-205ENST00000555543 OR6X1Q8NH79 312 aa17.86■□□□□ 0.45
VTI1B-205ENST00000555543 LIPHQ8WWY8 451 aa17.86■□□□□ 0.45
VTI1B-205ENST00000555543 LRRC37BQ96QE4 947 aa17.86■□□□□ 0.45
VTI1B-205ENST00000555543 DHRS9Q9BPW9 319 aa17.86■□□□□ 0.45
VTI1B-205ENST00000555543 TAGLN3Q9UI15 199 aa17.86■□□□□ 0.45
VTI1B-205ENST00000555543 DCTN3O75935 186 aa17.85■□□□□ 0.45
VTI1B-205ENST00000555543 IGLV1-44P01699 117 aa17.85■□□□□ 0.45
VTI1B-205ENST00000555543 CELA3BP08861 270 aa17.85■□□□□ 0.45
VTI1B-205ENST00000555543 TSPAN19P0C672 248 aa17.85■□□□□ 0.45
VTI1B-205ENST00000555543 CECR9P0C854 216 aa17.85■□□□□ 0.45
VTI1B-205ENST00000555543 HOXB1P14653 301 aaPredicted RBP17.85■□□□□ 0.45
VTI1B-205ENST00000555543 TTKP33981 857 aa17.85■□□□□ 0.45
VTI1B-205ENST00000555543 AQP2P41181 271 aa17.85■□□□□ 0.45
VTI1B-205ENST00000555543 C11orf71Q6IPW1 123 aa17.85■□□□□ 0.45
VTI1B-205ENST00000555543 MEX3DQ86XN8 651 aaKnown RBP17.85■□□□□ 0.45
VTI1B-205ENST00000555543 FAM86B1Q8N7N1 296 aa17.85■□□□□ 0.45
VTI1B-205ENST00000555543 MOSPD2Q8NHP6 518 aa17.85■□□□□ 0.45
VTI1B-205ENST00000555543 TMEM54Q969K7 222 aa17.85■□□□□ 0.45
VTI1B-205ENST00000555543 GTPBP3Q969Y2 492 aaKnown RBP17.85■□□□□ 0.45
VTI1B-205ENST00000555543 ADAD1Q96M93 576 aaKnown RBP17.85■□□□□ 0.45
VTI1B-205ENST00000555543 FNDC11Q9BVV2 318 aa17.85■□□□□ 0.45
VTI1B-205ENST00000555543 HEATR1Q9H583 2144 aaKnown RBP17.85■□□□□ 0.45
VTI1B-205ENST00000555543 B3GAT2Q9NPZ5 323 aa17.85■□□□□ 0.45
VTI1B-205ENST00000555543 FAIMQ9NVQ4 179 aa17.85■□□□□ 0.45
VTI1B-205ENST00000555543 ATP23Q9Y6H3 246 aa17.85■□□□□ 0.45
VTI1B-205ENST00000555543 TRIM64A6NGJ6 449 aa17.84■□□□□ 0.45
VTI1B-205ENST00000555543 TRIM64BA6NI03 449 aa17.84■□□□□ 0.45
VTI1B-205ENST00000555543 NDUFS7O75251 213 aa17.84■□□□□ 0.45
VTI1B-205ENST00000555543 IGKV3-15P01624 115 aa17.84■□□□□ 0.45
VTI1B-205ENST00000555543 PGA4P0DJD7 388 aa17.84■□□□□ 0.45
VTI1B-205ENST00000555543 PGA3P0DJD8 388 aa17.84■□□□□ 0.45
VTI1B-205ENST00000555543 B4GALT1P15291 398 aa17.84■□□□□ 0.45
VTI1B-205ENST00000555543 TCN1P20061 433 aaPredicted RBP17.84■□□□□ 0.45
VTI1B-205ENST00000555543 RUNX1T1Q06455 604 aa17.84■□□□□ 0.45
VTI1B-205ENST00000555543 TRAM2Q15035 370 aa17.84■□□□□ 0.45
VTI1B-205ENST00000555543 GLYATQ6IB77 296 aa17.84■□□□□ 0.45
VTI1B-205ENST00000555543 ZNF813Q6ZN06 617 aa17.84■□□□□ 0.45
VTI1B-205ENST00000555543 ZNF627Q7L945 461 aa17.84■□□□□ 0.45
VTI1B-205ENST00000555543 MDP1Q86V88 176 aa17.84■□□□□ 0.45
VTI1B-205ENST00000555543 PGAM4Q8N0Y7 254 aa17.84■□□□□ 0.45
VTI1B-205ENST00000555543 DEPDC4Q8N2C3 294 aa17.84■□□□□ 0.45
VTI1B-205ENST00000555543 CIARTQ8N365 385 aaPredicted RBP17.84■□□□□ 0.45
VTI1B-205ENST00000555543 ZNF566Q969W8 418 aa17.84■□□□□ 0.45
VTI1B-205ENST00000555543 SLC25A44Q96H78 314 aaPredicted RBP17.84■□□□□ 0.45
VTI1B-205ENST00000555543 CCT8L2Q96SF2 557 aa17.84■□□□□ 0.45
VTI1B-205ENST00000555543 GRIP2Q9C0E4 1043 aa17.84■□□□□ 0.45
VTI1B-205ENST00000555543 GSX1Q9H4S2 264 aaPredicted RBP17.84■□□□□ 0.45
VTI1B-205ENST00000555543 NOX3Q9HBY0 568 aa17.84■□□□□ 0.45
VTI1B-205ENST00000555543 GLTPQ9NZD2 209 aa17.84■□□□□ 0.45
VTI1B-205ENST00000555543 BCL10O95999 233 aa17.83■□□□□ 0.44
VTI1B-205ENST00000555543 HLA-HP01893 362 aa17.83■□□□□ 0.44
VTI1B-205ENST00000555543 IFI30P13284 250 aa17.83■□□□□ 0.44
VTI1B-205ENST00000555543 FOSL1P15407 271 aa17.83■□□□□ 0.44
VTI1B-205ENST00000555543 CBR1P16152 277 aa17.83■□□□□ 0.44
VTI1B-205ENST00000555543 MAKP20794 623 aa17.83■□□□□ 0.44
VTI1B-205ENST00000555543 CALCRP30988 508 aa17.83■□□□□ 0.44
VTI1B-205ENST00000555543 IFNA8P32881 189 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms