RNA–Protein interactions for RNA: ENST00000555490.1

AL352955.1-201, humanhuman

TSL 3 BASIC

Gene AL352955.1, Length 332 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL352955.1-201ENST00000555490 CMTM5Q96DZ9 223 aa2.23□□□□□ -2.05
AL352955.1-201ENST00000555490 SDSLQ96GA7 329 aa2.23□□□□□ -2.05
AL352955.1-201ENST00000555490 ZNF799Q96GE5 643 aa2.23□□□□□ -2.05
AL352955.1-201ENST00000555490 SMARCD1Q96GM5 515 aa2.23□□□□□ -2.05
AL352955.1-201ENST00000555490 C9orf72Q96LT7 481 aa2.23□□□□□ -2.05
AL352955.1-201ENST00000555490 SPATA13Q96N96 652 aa2.23□□□□□ -2.05
AL352955.1-201ENST00000555490 TSNARE1Q96NA8 513 aa2.23□□□□□ -2.05
AL352955.1-201ENST00000555490 TSGA13Q96PP4 275 aa2.23□□□□□ -2.05
AL352955.1-201ENST00000555490 QKIQ96PU8 341 aaKnown RBP eCLIP2.23□□□□□ -2.05
AL352955.1-201ENST00000555490 EBNA1BP2Q99848 306 aaKnown RBP2.23□□□□□ -2.05
AL352955.1-201ENST00000555490 ACBD6Q9BR61 282 aa2.23□□□□□ -2.05
AL352955.1-201ENST00000555490 TMEM121Q9BTD3 319 aa2.23□□□□□ -2.05
AL352955.1-201ENST00000555490 SNRNP25Q9BV90 132 aaKnown RBP2.23□□□□□ -2.05
AL352955.1-201ENST00000555490 DUSP16Q9BY84 665 aa2.23□□□□□ -2.05
AL352955.1-201ENST00000555490 VCX3BQ9H321 246 aa2.23□□□□□ -2.05
AL352955.1-201ENST00000555490 TMEM231Q9H6L2 316 aa2.23□□□□□ -2.05
AL352955.1-201ENST00000555490 ECT2Q9H8V3 914 aa2.23□□□□□ -2.05
AL352955.1-201ENST00000555490 ZNF702PQ9H963 129 aa2.23□□□□□ -2.05
AL352955.1-201ENST00000555490 LRRC40Q9H9A6 602 aa2.23□□□□□ -2.05
AL352955.1-201ENST00000555490 NANOGQ9H9S0 305 aa2.23□□□□□ -2.05
AL352955.1-201ENST00000555490 CSNK1G1Q9HCP0 422 aa2.23□□□□□ -2.05
AL352955.1-201ENST00000555490 ACP6Q9NPH0 428 aa2.23□□□□□ -2.05
AL352955.1-201ENST00000555490 MRPL40Q9NQ50 206 aaKnown RBP2.23□□□□□ -2.05
AL352955.1-201ENST00000555490 PNO1Q9NRX1 252 aaKnown RBP2.23□□□□□ -2.05
AL352955.1-201ENST00000555490 RGS18Q9NS28 235 aa2.23□□□□□ -2.05
AL352955.1-201ENST00000555490 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.23□□□□□ -2.05
AL352955.1-201ENST00000555490 BFARQ9NZS9 450 aa2.23□□□□□ -2.05
AL352955.1-201ENST00000555490 APPL1Q9UKG1 709 aa2.23□□□□□ -2.05
AL352955.1-201ENST00000555490 CDH9Q9ULB4 789 aa2.23□□□□□ -2.05
AL352955.1-201ENST00000555490 CA5BQ9Y2D0 317 aa2.23□□□□□ -2.05
AL352955.1-201ENST00000555490 PLLPQ9Y342 182 aa2.23□□□□□ -2.05
AL352955.1-201ENST00000555490 TRANK1O15050 2925 aa2.23□□□□□ -2.05
AL352955.1-201ENST00000555490 SCN10AQ9Y5Y9 1956 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 WI2-2373I1.2A0A1W2PRP0 233 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 PINLYPA6NC86 204 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 SMIM23A6NLE4 172 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 GOLGA8SH3BPF8 625 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 SGK494L7N484 410 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 LGALS8O00214 317 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 PFDN6O15212 129 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 B4GALT5O43286 388 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 PPIHO43447 177 aaKnown RBP2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 ZBTB14O43829 449 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 CACNG3O60359 315 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 SNNO75324 88 aaPredicted RBP2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 CIB2O75838 187 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 NDUFA7O95182 113 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 AP2A1O95782 977 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 SERPINE1P05121 402 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 CA3P07451 260 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 BPGMP07738 259 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 CD55P08174 381 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 CCNCP24863 283 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 PTBP1P26599 531 aaKnown RBP eCLIP2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 CALRP27797 417 aaKnown RBP2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 CCR1P32246 355 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 RPA3P35244 121 aaPredicted RBP2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 MAGEA12P43365 314 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 SLCO1A2P46721 670 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 SULT1E1P49888 294 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 SERPINB8P50452 374 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 RAP1GDS1P52306 607 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 ZNF133P52736 654 aaPredicted RBP2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 DAOAP59103 153 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 GPX6P59796 221 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 RND3P61587 244 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 NCALDP61601 193 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 YWHAGP61981 247 aaKnown RBP eCLIP2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 BDH1Q02338 343 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 MAPRE2Q15555 327 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 LIPKQ5VXJ0 399 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 NCBP2-AS2Q69YL0 99 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 PDPK2PQ6A1A2 396 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 TTC19Q6DKK2 380 aaPredicted RBP2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 PMF1Q6P1K2 205 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 Q7L0L9 218 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 HSD17B13Q7Z5P4 300 aaPredicted RBP2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 PPP1R27Q86WC6 154 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 KRTAP11-1Q8IUC1 163 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 NUDCD3Q8IVD9 361 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 CNTN4Q8IWV2 1026 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 PQLC3Q8N755 202 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 LINC01555Q8NAE3 123 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 ZSCAN4Q8NAM6 433 aaPredicted RBP2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 STKLD1Q8NE28 680 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 CATSPER1Q8NEC5 780 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 BBS1Q8NFJ9 593 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 CCDC110Q8TBZ0 833 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 URGCPQ8TCY9 931 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 TCP10LQ8TDR4 215 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 RNF139Q8WU17 664 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 C2orf15Q8WU43 125 aaKnown RBP2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 ARNTL2Q8WYA1 636 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 STMN2Q93045 179 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 NEIL2Q969S2 332 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 MCUR1Q96AQ8 359 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 MRPL38Q96DV4 380 aaKnown RBP2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 CERS2Q96G23 380 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 TMEM80Q96HE8 168 aa2.22□□□□□ -2.05
AL352955.1-201ENST00000555490 SERPINB11Q96P15 392 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms