RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 TFF3Q07654 80 aa11.21□□□□□ -0.61
SYNE2-219ENST00000555323 RIPK1Q13546 671 aa11.21□□□□□ -0.61
SYNE2-219ENST00000555323 RCN1Q15293 331 aa11.21□□□□□ -0.61
SYNE2-219ENST00000555323 HIST3H3Q16695 136 aa11.21□□□□□ -0.61
SYNE2-219ENST00000555323 TSPO2Q5TGU0 170 aa11.21□□□□□ -0.61
SYNE2-219ENST00000555323 FAM205BPQ63HN1 556 aa11.21□□□□□ -0.61
SYNE2-219ENST00000555323 GPR139Q6DWJ6 353 aa11.21□□□□□ -0.61
SYNE2-219ENST00000555323 NIPAL3Q6P499 406 aa11.21□□□□□ -0.61
SYNE2-219ENST00000555323 CASP12Q6UXS9 341 aa11.21□□□□□ -0.61
SYNE2-219ENST00000555323 Q6ZT83 130 aa11.21□□□□□ -0.61
SYNE2-219ENST00000555323 HDDC2Q7Z4H3 204 aa11.21□□□□□ -0.61
SYNE2-219ENST00000555323 WDFY1Q8IWB7 410 aa11.21□□□□□ -0.61
SYNE2-219ENST00000555323 C20orf196Q8IYI0 205 aa11.21□□□□□ -0.61
SYNE2-219ENST00000555323 ZNF100Q8IYN0 542 aa11.21□□□□□ -0.61
SYNE2-219ENST00000555323 GABRG1Q8N1C3 465 aa11.21□□□□□ -0.61
SYNE2-219ENST00000555323 ARIH2OSQ8N7S6 290 aa11.21□□□□□ -0.61
SYNE2-219ENST00000555323 POMGNT2Q8NAT1 580 aa11.21□□□□□ -0.61
SYNE2-219ENST00000555323 ZNF519Q8TB69 540 aa11.21□□□□□ -0.61
SYNE2-219ENST00000555323 FANK1Q8TC84 345 aa11.21□□□□□ -0.61
SYNE2-219ENST00000555323 TMEM54Q969K7 222 aa11.21□□□□□ -0.61
SYNE2-219ENST00000555323 SAMD8Q96LT4 415 aa11.21□□□□□ -0.61
SYNE2-219ENST00000555323 RBM4BQ9BQ04 359 aaKnown RBP11.21□□□□□ -0.61
SYNE2-219ENST00000555323 C9orf16Q9BUW7 83 aa11.21□□□□□ -0.61
SYNE2-219ENST00000555323 KATNB1Q9BVA0 655 aa11.21□□□□□ -0.61
SYNE2-219ENST00000555323 RBM4Q9BWF3 364 aaKnown RBP11.21□□□□□ -0.61
SYNE2-219ENST00000555323 PLA2G12AQ9BZM1 189 aa11.21□□□□□ -0.61
SYNE2-219ENST00000555323 SLCO5A1Q9H2Y9 848 aa11.21□□□□□ -0.61
SYNE2-219ENST00000555323 EGLN3Q9H6Z9 239 aa11.21□□□□□ -0.61
SYNE2-219ENST00000555323 C12orf49Q9H741 205 aa11.21□□□□□ -0.61
SYNE2-219ENST00000555323 SMURF2Q9HAU4 748 aa11.21□□□□□ -0.61
SYNE2-219ENST00000555323 KCNJ16Q9NPI9 418 aa11.21□□□□□ -0.61
SYNE2-219ENST00000555323 ELOVL5Q9NYP7 299 aa11.21□□□□□ -0.61
SYNE2-219ENST00000555323 MALT1Q9UDY8 824 aa11.21□□□□□ -0.61
SYNE2-219ENST00000555323 PRSS50Q9UI38 385 aa11.21□□□□□ -0.61
SYNE2-219ENST00000555323 TMEFF2Q9UIK5 374 aaPredicted RBP11.21□□□□□ -0.61
SYNE2-219ENST00000555323 POFUT2Q9Y2G5 429 aa11.21□□□□□ -0.61
SYNE2-219ENST00000555323 DIDO1Q9BTC0 2240 aaKnown RBP11.21□□□□□ -0.62
SYNE2-219ENST00000555323 ALPK2Q86TB3 2170 aa11.21□□□□□ -0.62
SYNE2-219ENST00000555323 SAC3D1A6NKF1 404 aa11.2□□□□□ -0.62
SYNE2-219ENST00000555323 H0YHG0 523 aa11.2□□□□□ -0.62
SYNE2-219ENST00000555323 CASQ2O14958 399 aaPredicted RBP11.2□□□□□ -0.62
SYNE2-219ENST00000555323 SLC43A1O75387 559 aa11.2□□□□□ -0.62
SYNE2-219ENST00000555323 TRMUO75648 421 aaKnown RBP11.2□□□□□ -0.62
SYNE2-219ENST00000555323 SERPINI2O75830 405 aa11.2□□□□□ -0.62
SYNE2-219ENST00000555323 SMNDC1O75940 238 aaKnown RBP eCLIP11.2□□□□□ -0.62
SYNE2-219ENST00000555323 ALPLP05186 524 aa11.2□□□□□ -0.62
SYNE2-219ENST00000555323 PGA4P0DJD7 388 aa11.2□□□□□ -0.62
SYNE2-219ENST00000555323 PGA3P0DJD8 388 aa11.2□□□□□ -0.62
SYNE2-219ENST00000555323 ACADSP16219 412 aa11.2□□□□□ -0.62
SYNE2-219ENST00000555323 SDHAP31040 664 aa11.2□□□□□ -0.62
SYNE2-219ENST00000555323 GIPRP48546 466 aa11.2□□□□□ -0.62
SYNE2-219ENST00000555323 ASCL1P50553 236 aa11.2□□□□□ -0.62
SYNE2-219ENST00000555323 RPS6KA3P51812 740 aa11.2□□□□□ -0.62
SYNE2-219ENST00000555323 ZNF133P52736 654 aaPredicted RBP11.2□□□□□ -0.62
SYNE2-219ENST00000555323 ESRRGP62508 458 aa11.2□□□□□ -0.62
SYNE2-219ENST00000555323 ERVK-25P63136 954 aa11.2□□□□□ -0.62
SYNE2-219ENST00000555323 CDK5Q00535 292 aa11.2□□□□□ -0.62
SYNE2-219ENST00000555323 RUNX1T1Q06455 604 aa11.2□□□□□ -0.62
SYNE2-219ENST00000555323 P2RY6Q15077 328 aa11.2□□□□□ -0.62
SYNE2-219ENST00000555323 ZNF362Q5T0B9 420 aaPredicted RBP11.2□□□□□ -0.62
SYNE2-219ENST00000555323 IGFN1Q86VF2 1251 aa11.2□□□□□ -0.62
SYNE2-219ENST00000555323 LNX2Q8N448 690 aa11.2□□□□□ -0.62
SYNE2-219ENST00000555323 OR8D4Q8NGM9 314 aa11.2□□□□□ -0.62
SYNE2-219ENST00000555323 NMD3Q96D46 503 aaKnown RBP11.2□□□□□ -0.62
SYNE2-219ENST00000555323 BOD1Q96IK1 185 aa11.2□□□□□ -0.62
SYNE2-219ENST00000555323 TSPAN32Q96QS1 320 aa11.2□□□□□ -0.62
SYNE2-219ENST00000555323 KCNK17Q96T54 332 aa11.2□□□□□ -0.62
SYNE2-219ENST00000555323 CIB1Q99828 191 aa11.2□□□□□ -0.62
SYNE2-219ENST00000555323 POLDIP3Q9BY77 421 aaKnown RBP11.2□□□□□ -0.62
SYNE2-219ENST00000555323 OPN3Q9H1Y3 402 aaPredicted RBP11.2□□□□□ -0.62
SYNE2-219ENST00000555323 PAPOLBQ9NRJ5 636 aaKnown RBP11.2□□□□□ -0.62
SYNE2-219ENST00000555323 SLC7A10Q9NS82 523 aa11.2□□□□□ -0.62
SYNE2-219ENST00000555323 GRHPRQ9UBQ7 328 aa11.2□□□□□ -0.62
SYNE2-219ENST00000555323 IL20RAQ9UHF4 553 aa11.2□□□□□ -0.62
SYNE2-219ENST00000555323 BAIAP2Q9UQB8 552 aa11.2□□□□□ -0.62
SYNE2-219ENST00000555323 ADAM18Q9Y3Q7 739 aa11.2□□□□□ -0.62
SYNE2-219ENST00000555323 IER3IP1Q9Y5U9 82 aa11.2□□□□□ -0.62
SYNE2-219ENST00000555323 A6NIZ1 184 aa11.19□□□□□ -0.62
SYNE2-219ENST00000555323 UPK3AO75631 287 aa11.19□□□□□ -0.62
SYNE2-219ENST00000555323 IGHG1P01857 330 aa11.19□□□□□ -0.62
SYNE2-219ENST00000555323 IGFBP1P08833 259 aaPredicted RBP11.19□□□□□ -0.62
SYNE2-219ENST00000555323 ALDH3A2P51648 485 aa11.19□□□□□ -0.62
SYNE2-219ENST00000555323 RAP1BP61224 184 aa11.19□□□□□ -0.62
SYNE2-219ENST00000555323 RAP1AP62834 184 aa11.19□□□□□ -0.62
SYNE2-219ENST00000555323 ITGADQ13349 1161 aa11.19□□□□□ -0.62
SYNE2-219ENST00000555323 CAMK2DQ13557 499 aa11.19□□□□□ -0.62
SYNE2-219ENST00000555323 DAG1Q14118 895 aa11.19□□□□□ -0.62
SYNE2-219ENST00000555323 MELKQ14680 651 aa11.19□□□□□ -0.62
SYNE2-219ENST00000555323 STK11Q15831 433 aa11.19□□□□□ -0.62
SYNE2-219ENST00000555323 SLC36A3Q495N2 470 aa11.19□□□□□ -0.62
SYNE2-219ENST00000555323 ZBTB49Q6ZSB9 765 aa11.19□□□□□ -0.62
SYNE2-219ENST00000555323 LUZP2Q86TE4 346 aa11.19□□□□□ -0.62
SYNE2-219ENST00000555323 CBR4Q8N4T8 237 aa11.19□□□□□ -0.62
SYNE2-219ENST00000555323 OR52L1Q8NGH7 329 aa11.19□□□□□ -0.62
SYNE2-219ENST00000555323 FNDC8Q8TC99 324 aa11.19□□□□□ -0.62
SYNE2-219ENST00000555323 HDAC2Q92769 488 aaKnown RBP11.19□□□□□ -0.62
SYNE2-219ENST00000555323 RNASE6Q93091 150 aaKnown RBP11.19□□□□□ -0.62
SYNE2-219ENST00000555323 ZNF566Q969W8 418 aa11.19□□□□□ -0.62
SYNE2-219ENST00000555323 Q96M85 177 aa11.19□□□□□ -0.62
SYNE2-219ENST00000555323 ERMAPQ96PL5 475 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms