RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 OPN5Q6U736 354 aa12.89□□□□□ -0.35
VTI1B-204ENST00000554659 OVCH1Q7RTY7 1134 aa12.89□□□□□ -0.35
VTI1B-204ENST00000554659 KIAA0907Q7Z7F0 614 aaPredicted RBP12.89□□□□□ -0.35
VTI1B-204ENST00000554659 OR5L1Q8NGL2 311 aa12.89□□□□□ -0.35
VTI1B-204ENST00000554659 OR6M1Q8NGM8 313 aa12.89□□□□□ -0.35
VTI1B-204ENST00000554659 FKRPQ9H9S5 495 aa12.89□□□□□ -0.35
VTI1B-204ENST00000554659 MRPS28Q9Y2Q9 187 aaKnown RBP12.89□□□□□ -0.35
VTI1B-204ENST00000554659 PLPP1O14494 284 aa12.89□□□□□ -0.35
VTI1B-204ENST00000554659 MAGEB4O15481 346 aaPredicted RBP12.89□□□□□ -0.35
VTI1B-204ENST00000554659 CD63P08962 238 aa12.89□□□□□ -0.35
VTI1B-204ENST00000554659 ELK1P19419 428 aa12.89□□□□□ -0.35
VTI1B-204ENST00000554659 GCH1P30793 250 aa12.89□□□□□ -0.35
VTI1B-204ENST00000554659 GJA4P35212 333 aa12.89□□□□□ -0.35
VTI1B-204ENST00000554659 ZP2Q05996 745 aa12.89□□□□□ -0.35
VTI1B-204ENST00000554659 ACSM1Q08AH1 577 aa12.89□□□□□ -0.35
VTI1B-204ENST00000554659 MSMO1Q15800 293 aa12.89□□□□□ -0.35
VTI1B-204ENST00000554659 BRICD5Q6PL45 260 aa12.89□□□□□ -0.35
VTI1B-204ENST00000554659 WDR88Q6ZMY6 472 aa12.89□□□□□ -0.35
VTI1B-204ENST00000554659 PDXPQ96GD0 296 aa12.89□□□□□ -0.35
VTI1B-204ENST00000554659 PCDHGA1Q9Y5H4 931 aa12.89□□□□□ -0.35
VTI1B-204ENST00000554659 PRKRAO75569 313 aaKnown RBP12.89□□□□□ -0.35
VTI1B-204ENST00000554659 GLCEO94923 617 aa12.89□□□□□ -0.35
VTI1B-204ENST00000554659 LGI1O95970 557 aa12.89□□□□□ -0.35
VTI1B-204ENST00000554659 APEHP13798 732 aaKnown RBP12.89□□□□□ -0.35
VTI1B-204ENST00000554659 TLE1Q04724 770 aa12.89□□□□□ -0.35
VTI1B-204ENST00000554659 MZT1Q08AG7 82 aa12.89□□□□□ -0.35
VTI1B-204ENST00000554659 DYNC2LI1Q8TCX1 351 aa12.89□□□□□ -0.35
VTI1B-204ENST00000554659 SCARB1Q8WTV0 552 aa12.89□□□□□ -0.35
VTI1B-204ENST00000554659 RNF32Q9H0A6 362 aa12.89□□□□□ -0.35
VTI1B-204ENST00000554659 LRIT2A6NDA9 550 aa12.88□□□□□ -0.35
VTI1B-204ENST00000554659 SMLR1H3BR10 107 aa12.88□□□□□ -0.35
VTI1B-204ENST00000554659 CPEP16870 476 aa12.88□□□□□ -0.35
VTI1B-204ENST00000554659 SRPXP78539 464 aa12.88□□□□□ -0.35
VTI1B-204ENST00000554659 SF3B4Q15427 424 aaKnown RBP eCLIP12.88□□□□□ -0.35
VTI1B-204ENST00000554659 CCSMST1Q4G0I0 132 aa12.88□□□□□ -0.35
VTI1B-204ENST00000554659 ADGRE4PQ86SQ3 457 aa12.88□□□□□ -0.35
VTI1B-204ENST00000554659 TMEM200AQ86VY9 491 aa12.88□□□□□ -0.35
VTI1B-204ENST00000554659 RIMKLAQ8IXN7 391 aa12.88□□□□□ -0.35
VTI1B-204ENST00000554659 FAM3DQ96BQ1 224 aa12.88□□□□□ -0.35
VTI1B-204ENST00000554659 STACQ99469 402 aa12.88□□□□□ -0.35
VTI1B-204ENST00000554659 CBX7O95931 251 aa12.88□□□□□ -0.35
VTI1B-204ENST00000554659 BCL6P41182 706 aa12.88□□□□□ -0.35
VTI1B-204ENST00000554659 TMEM201Q5SNT2 666 aa12.88□□□□□ -0.35
VTI1B-204ENST00000554659 LPCAT3Q6P1A2 487 aa12.88□□□□□ -0.35
VTI1B-204ENST00000554659 PHOSPHO2Q8TCD6 241 aa12.88□□□□□ -0.35
VTI1B-204ENST00000554659 ZNF75AQ96N20 296 aa12.88□□□□□ -0.35
VTI1B-204ENST00000554659 SLC22A12Q96S37 553 aa12.88□□□□□ -0.35
VTI1B-204ENST00000554659 TXN2Q99757 166 aa12.88□□□□□ -0.35
VTI1B-204ENST00000554659 SLC25A37Q9NYZ2 338 aa12.88□□□□□ -0.35
VTI1B-204ENST00000554659 RPH3ALQ9UNE2 315 aa12.88□□□□□ -0.35
VTI1B-204ENST00000554659 PTRH2Q9Y3E5 179 aaKnown RBP12.88□□□□□ -0.35
VTI1B-204ENST00000554659 A0A087WZY1 265 aa12.88□□□□□ -0.35
VTI1B-204ENST00000554659 HCRTR1O43613 425 aa12.88□□□□□ -0.35
VTI1B-204ENST00000554659 NR0B2Q15466 257 aa12.88□□□□□ -0.35
VTI1B-204ENST00000554659 Q6ZTK2 550 aa12.88□□□□□ -0.35
VTI1B-204ENST00000554659 ESPNLQ6ZVH7 1005 aa12.88□□□□□ -0.35
VTI1B-204ENST00000554659 FAM122BQ7Z309 247 aa12.88□□□□□ -0.35
VTI1B-204ENST00000554659 UPRTQ96BW1 309 aa12.88□□□□□ -0.35
VTI1B-204ENST00000554659 ADAM19Q9H013 955 aa12.88□□□□□ -0.35
VTI1B-204ENST00000554659 CORINQ9Y5Q5 1042 aa12.88□□□□□ -0.35
VTI1B-204ENST00000554659 CITO14578 2027 aa12.88□□□□□ -0.35
VTI1B-204ENST00000554659 ATP6V1G2-DDX39BF2Z307 99 aa12.88□□□□□ -0.35
VTI1B-204ENST00000554659 HBE1P02100 147 aa12.88□□□□□ -0.35
VTI1B-204ENST00000554659 OPN1LWP04000 364 aa12.88□□□□□ -0.35
VTI1B-204ENST00000554659 FCGR2AP12318 317 aa12.88□□□□□ -0.35
VTI1B-204ENST00000554659 ETV1P50549 477 aa12.88□□□□□ -0.35
VTI1B-204ENST00000554659 CDC20Q12834 499 aa12.88□□□□□ -0.35
VTI1B-204ENST00000554659 OTUD1Q5VV17 481 aaPredicted RBP12.88□□□□□ -0.35
VTI1B-204ENST00000554659 DHRS4L2Q6PKH6 230 aa12.88□□□□□ -0.35
VTI1B-204ENST00000554659 PLPP6Q8IY26 295 aa12.88□□□□□ -0.35
VTI1B-204ENST00000554659 TMEFF1Q8IYR6 380 aa12.88□□□□□ -0.35
VTI1B-204ENST00000554659 PIGCQ92535 297 aa12.88□□□□□ -0.35
VTI1B-204ENST00000554659 SLC5A10A0PJK1 596 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 ZAR1LA6NP61 321 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 RNF212BA8MTL3 300 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 GFYI3L273 518 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 UTS2O95399 124 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 IL2RGP31785 369 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 MRPS21P82921 87 aaKnown RBP12.87□□□□□ -0.35
VTI1B-204ENST00000554659 HNF4GQ14541 408 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 OR5M10Q6IEU7 315 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 BAGE3Q86Y29 109 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 BAGE2Q86Y30 109 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 SKA3Q8IX90 412 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 LCORQ96JN0 433 aaPredicted RBP12.87□□□□□ -0.35
VTI1B-204ENST00000554659 TOX2Q96NM4 488 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 NUDT22Q9BRQ3 303 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 LMAN1LQ9HAT1 526 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 ISYNA1Q9NPH2 558 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 RAB22AQ9UL26 194 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 ALX3O95076 343 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 CNR1P21554 472 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 SLC6A12P48065 614 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 MAT1AQ00266 395 aaKnown RBP12.87□□□□□ -0.35
VTI1B-204ENST00000554659 ZNF74Q16587 644 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 MANEAQ5SRI9 462 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 RBMS3Q6XE24 437 aaKnown RBP12.87□□□□□ -0.35
VTI1B-204ENST00000554659 CPNE4Q96A23 557 aaPredicted RBP12.87□□□□□ -0.35
VTI1B-204ENST00000554659 SLC46A1Q96NT5 459 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 CACNA1SQ13698 1873 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms