RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, human

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R3A-204	ENST00000554574	GPR151	Q8TDV0	419 aa		4.27	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	SAP25	Q8TEE9	199 aa		4.27	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	RIT1	Q92963	219 aa		4.27	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	FER1L6-AS2	Q96M78	137 aa		4.27	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	HARBI1	Q96MB7	349 aa		4.27	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	TSC22D3	Q99576	134 aa		4.27	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	LMF2	Q9BU23	707 aa	Known RBP	4.27	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	FNDC11	Q9BVV2	318 aa		4.27	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	POLR2J2	Q9GZM3	115 aa	Known RBP	4.27	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	YIPF3	Q9GZM5	350 aa		4.27	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	SPRTN	Q9H040	489 aa	Predicted RBP	4.27	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	POLR2J3	Q9H1A7	115 aa	Known RBP	4.27	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	DUSP21	Q9H596	190 aa		4.27	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	EVA1A	Q9H8M9	152 aa		4.27	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	CACYBP	Q9HB71	228 aa	Known RBP	4.27	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	CCNB1IP1	Q9NPC3	277 aa		4.27	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	HINT3	Q9NQE9	182 aa	Known RBP	4.27	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	CUTC	Q9NTM9	273 aa		4.27	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	4.27	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	MSRB1	Q9NZV6	116 aa		4.27	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	CRNN	Q9UBG3	495 aa	Predicted RBP	4.27	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	CDC14A	Q9UNH5	594 aa		4.27	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	ZNF443	Q9Y2A4	671 aa	Predicted RBP	4.27	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	TPRKB	Q9Y3C4	175 aa		4.27	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	MMACHC	Q9Y4U1	282 aa		4.27	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	TMEM184B	Q9Y519	407 aa	Predicted RBP	4.27	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	COMMD3-BMI1	R4GMX3	469 aa		4.27	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	COL27A1	Q8IZC6	1860 aa	Predicted RBP	4.27	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	KMT2E	Q8IZD2	1858 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	LY6G6E	A0A0G2JKS1	128 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	OR10H3	O60404	316 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	MPZL2	O60487	215 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	TPST2	O60704	377 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	WBP4	O75554	376 aa	Known RBP	4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	CDC123	O75794	336 aa	Predicted RBP	4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	KCNK2	O95069	426 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	BCL10	O95999	233 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	HIST1H2AB	P04908	130 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	TPO	P07202	933 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	ANKRD34C	P0C6C1	535 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	POU2F1	P14859	743 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	FOLR1	P15328	257 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	MAOA	P21397	527 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	CHAT	P28329	748 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	IFNA8	P32881	189 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	GABRA3	P34903	492 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	CRISP1	P54107	249 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	UGT2B15	P54855	530 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	SH3BGR	P55822	239 aa	Predicted RBP	4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	RGS8	P57771	180 aa	Predicted RBP	4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	TAS2R41	P59536	307 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	CDC42	P60953	191 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	EEF1A1	P68104	462 aa	Known RBP	4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	BTG2	P78543	158 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	MAT1A	Q00266	395 aa	Known RBP	4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	CSTF1	Q05048	431 aa	Known RBP	4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	ZNF91	Q05481	1191 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	FUT7	Q11130	342 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	ST3GAL3	Q11203	375 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	ZNF155	Q12901	538 aa	Predicted RBP	4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	SRSF5	Q13243	272 aa	Known RBP	4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	PMS2P3	Q13401	168 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	TRAM2	Q15035	370 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	PTGES3	Q15185	160 aa	Known RBP	4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	ZNHIT3	Q15649	155 aa	Predicted RBP	4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	SYT16	Q17RD7	645 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	HLA-B	Q31612	363 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	CCNJ	Q5T5M9	372 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	XAF1	Q6GPH4	301 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	C1orf94	Q6P1W5	598 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	PODNL1	Q6PEZ8	512 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	HIST3H2A	Q7L7L0	130 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	HMGN2P46	Q86SG4	172 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	MRGPRG	Q86SM5	289 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	CLIP4	Q8N3C7	705 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	GALNT16	Q8N428	558 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574		Q8N9G6	341 aa	Predicted RBP	4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	SCCPDH	Q8NBX0	429 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	MORN4	Q8NDC4	146 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	BPIFB6	Q8NFQ5	453 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	OR4K5	Q8NGD3	323 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	OR52R1	Q8NGF1	315 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	OR1L3	Q8NH93	324 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	RHOXF1	Q8NHV9	184 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	ZNF420	Q8TAQ5	688 aa	Predicted RBP	4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	FAM81A	Q8TBF8	368 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	PIK3R3	Q92569	461 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	NAT6	Q93015	286 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	SLC38A4	Q969I6	547 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	TMIGD2	Q96BF3	282 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	ZNF501	Q96CX3	271 aa	Predicted RBP	4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	VMP1	Q96GC9	406 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	VSTM2L	Q96N03	204 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	SIGLEC11	Q96RL6	698 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	NODAL	Q96S42	347 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	WDR77	Q9BQA1	342 aa	Predicted RBP	4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	POLDIP3	Q9BY77	421 aa	Known RBP	4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	UCK2	Q9BZX2	261 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	ARMC7	Q9H6L4	198 aa		4.26	□□□□□ -1.73
PPP4R3A-204	ENST00000554574	FANCE	Q9HB96	536 aa		4.26	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms