RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 CARM1Q86X55 608 aa11.47□□□□□ -0.57
SHMT2-211ENST00000554310 RBM45Q8IUH3 476 aaKnown RBP11.47□□□□□ -0.57
SHMT2-211ENST00000554310 KDM8Q8N371 416 aa11.47□□□□□ -0.57
SHMT2-211ENST00000554310 GALNT4Q8N4A0 578 aa11.47□□□□□ -0.57
SHMT2-211ENST00000554310 ANKK1Q8NFD2 765 aa11.47□□□□□ -0.57
SHMT2-211ENST00000554310 OR52N5Q8NH56 324 aa11.47□□□□□ -0.57
SHMT2-211ENST00000554310 AKAP1Q92667 903 aaKnown RBP eCLIP11.47□□□□□ -0.57
SHMT2-211ENST00000554310 FBXW5Q969U6 566 aa11.47□□□□□ -0.57
SHMT2-211ENST00000554310 BOD1Q96IK1 185 aa11.47□□□□□ -0.57
SHMT2-211ENST00000554310 RADILQ96JH8 1075 aa11.47□□□□□ -0.57
SHMT2-211ENST00000554310 CIB1Q99828 191 aa11.47□□□□□ -0.57
SHMT2-211ENST00000554310 ZNF426Q9BUY5 554 aa11.47□□□□□ -0.57
SHMT2-211ENST00000554310 LINC00470Q9BZP3 86 aa11.47□□□□□ -0.57
SHMT2-211ENST00000554310 MAGIXQ9H6Y5 334 aa11.47□□□□□ -0.57
SHMT2-211ENST00000554310 OBP2BQ9NPH6 170 aa11.47□□□□□ -0.57
SHMT2-211ENST00000554310 SLC17A5Q9NRA2 495 aa11.47□□□□□ -0.57
SHMT2-211ENST00000554310 MRPL39Q9NYK5 338 aaKnown RBP11.47□□□□□ -0.57
SHMT2-211ENST00000554310 SLC7A7Q9UM01 511 aa11.47□□□□□ -0.57
SHMT2-211ENST00000554310 SH3GLB1Q9Y371 365 aa11.47□□□□□ -0.57
SHMT2-211ENST00000554310 C2CD3Q4AC94 2353 aa11.47□□□□□ -0.57
SHMT2-211ENST00000554310 DPRXA6NFQ7 191 aa11.46□□□□□ -0.57
SHMT2-211ENST00000554310 SLC43A1O75387 559 aa11.46□□□□□ -0.57
SHMT2-211ENST00000554310 ZNF432O94892 652 aa11.46□□□□□ -0.57
SHMT2-211ENST00000554310 PRSS23O95084 383 aa11.46□□□□□ -0.57
SHMT2-211ENST00000554310 LYPD3O95274 346 aa11.46□□□□□ -0.57
SHMT2-211ENST00000554310 THY1P04216 161 aa11.46□□□□□ -0.57
SHMT2-211ENST00000554310 PTAFRP25105 342 aa11.46□□□□□ -0.57
SHMT2-211ENST00000554310 KDELR2P33947 212 aa11.46□□□□□ -0.57
SHMT2-211ENST00000554310 CHN2P52757 468 aa11.46□□□□□ -0.57
SHMT2-211ENST00000554310 SH3BGRP55822 239 aaPredicted RBP11.46□□□□□ -0.57
SHMT2-211ENST00000554310 IL1RL1Q01638 556 aa11.46□□□□□ -0.57
SHMT2-211ENST00000554310 PUDPQ08623 228 aa11.46□□□□□ -0.57
SHMT2-211ENST00000554310 ZNF672Q499Z4 452 aaPredicted RBP11.46□□□□□ -0.57
SHMT2-211ENST00000554310 CYBRD1Q53TN4 286 aa11.46□□□□□ -0.57
SHMT2-211ENST00000554310 SHEQ5VZ18 495 aa11.46□□□□□ -0.57
SHMT2-211ENST00000554310 TTC33Q6PID6 262 aaPredicted RBP11.46□□□□□ -0.57
SHMT2-211ENST00000554310 WDR88Q6ZMY6 472 aa11.46□□□□□ -0.57
SHMT2-211ENST00000554310 UEVLDQ8IX04 471 aa11.46□□□□□ -0.57
SHMT2-211ENST00000554310 C10orf53Q8N6V4 93 aa11.46□□□□□ -0.57
SHMT2-211ENST00000554310 KBTBD8Q8NFY9 601 aa11.46□□□□□ -0.57
SHMT2-211ENST00000554310 TMEM171Q8WVE6 324 aa11.46□□□□□ -0.57
SHMT2-211ENST00000554310 IGFBPL1Q8WX77 278 aa11.46□□□□□ -0.57
SHMT2-211ENST00000554310 FAM162AQ96A26 154 aa11.46□□□□□ -0.57
SHMT2-211ENST00000554310 MOGAT1Q96PD6 335 aa11.46□□□□□ -0.57
SHMT2-211ENST00000554310 SLC29A1Q99808 456 aa11.46□□□□□ -0.57
SHMT2-211ENST00000554310 BDH2Q9BUT1 245 aa11.46□□□□□ -0.57
SHMT2-211ENST00000554310 CHID1Q9BWS9 393 aa11.46□□□□□ -0.57
SHMT2-211ENST00000554310 CXorf56Q9H5V9 222 aa11.46□□□□□ -0.57
SHMT2-211ENST00000554310 DCAF13Q9NV06 445 aaKnown RBP11.46□□□□□ -0.57
SHMT2-211ENST00000554310 MGAT4BQ9UQ53 548 aa11.46□□□□□ -0.57
SHMT2-211ENST00000554310 NOX1Q9Y5S8 564 aa11.46□□□□□ -0.57
SHMT2-211ENST00000554310 USF3Q68DE3 2245 aa11.45□□□□□ -0.58
SHMT2-211ENST00000554310 SAC3D1A6NKF1 404 aa11.45□□□□□ -0.58
SHMT2-211ENST00000554310 SOCS2O14508 198 aa11.45□□□□□ -0.58
SHMT2-211ENST00000554310 ABCD4O14678 606 aa11.45□□□□□ -0.58
SHMT2-211ENST00000554310 ARHGEF9O43307 516 aa11.45□□□□□ -0.58
SHMT2-211ENST00000554310 DEAF1O75398 565 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-211ENST00000554310 OR5F1O95221 314 aa11.45□□□□□ -0.58
SHMT2-211ENST00000554310 WNT11O96014 354 aa11.45□□□□□ -0.58
SHMT2-211ENST00000554310 HPRP00739 348 aa11.45□□□□□ -0.58
SHMT2-211ENST00000554310 THRBP10828 461 aa11.45□□□□□ -0.58
SHMT2-211ENST00000554310 PTNP21246 168 aa11.45□□□□□ -0.58
SHMT2-211ENST00000554310 CBLP22681 906 aa11.45□□□□□ -0.58
SHMT2-211ENST00000554310 PAX7P23759 505 aa11.45□□□□□ -0.58
SHMT2-211ENST00000554310 ZNF83P51522 516 aa11.45□□□□□ -0.58
SHMT2-211ENST00000554310 TAS2R41P59536 307 aa11.45□□□□□ -0.58
SHMT2-211ENST00000554310 ADAM8P78325 824 aa11.45□□□□□ -0.58
SHMT2-211ENST00000554310 NKX6-1P78426 367 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-211ENST00000554310 POU3F1Q03052 451 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-211ENST00000554310 LTBQ06643 244 aa11.45□□□□□ -0.58
SHMT2-211ENST00000554310 PMS2P3Q13401 168 aa11.45□□□□□ -0.58
SHMT2-211ENST00000554310 ZNF74Q16587 644 aa11.45□□□□□ -0.58
SHMT2-211ENST00000554310 DEF8Q6ZN54 512 aa11.45□□□□□ -0.58
SHMT2-211ENST00000554310 TSPYL5Q86VY4 417 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-211ENST00000554310 TMEM123Q8N131 208 aa11.45□□□□□ -0.58
SHMT2-211ENST00000554310 PIK3C3Q8NEB9 887 aa11.45□□□□□ -0.58
SHMT2-211ENST00000554310 OR1K1Q8NGR3 316 aa11.45□□□□□ -0.58
SHMT2-211ENST00000554310 OR5J2Q8NH18 312 aa11.45□□□□□ -0.58
SHMT2-211ENST00000554310 LILRB1Q8NHL6 650 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-211ENST00000554310 LZICQ8WZA0 190 aa11.45□□□□□ -0.58
SHMT2-211ENST00000554310 OR2M2Q96R28 347 aa11.45□□□□□ -0.58
SHMT2-211ENST00000554310 SEPHS2Q99611 448 aa11.45□□□□□ -0.58
SHMT2-211ENST00000554310 TMUB1Q9BVT8 246 aa11.45□□□□□ -0.58
SHMT2-211ENST00000554310 GSX2Q9BZM3 304 aa11.45□□□□□ -0.58
SHMT2-211ENST00000554310 FKRPQ9H9S5 495 aa11.45□□□□□ -0.58
SHMT2-211ENST00000554310 MOV10Q9HCE1 1003 aaKnown RBP11.45□□□□□ -0.58
SHMT2-211ENST00000554310 A0A1W2PR80 420 aa11.44□□□□□ -0.58
SHMT2-211ENST00000554310 SHISA9B4DS77 424 aa11.44□□□□□ -0.58
SHMT2-211ENST00000554310 LRRN3E7EW58 273 aa11.44□□□□□ -0.58
SHMT2-211ENST00000554310 RPL36A-HNRNPH2H7BZ11 118 aa11.44□□□□□ -0.58
SHMT2-211ENST00000554310 KPNA4O00629 521 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-211ENST00000554310 PLPP3O14495 311 aa11.44□□□□□ -0.58
SHMT2-211ENST00000554310 UPK3AO75631 287 aa11.44□□□□□ -0.58
SHMT2-211ENST00000554310 CD99P14209 185 aa11.44□□□□□ -0.58
SHMT2-211ENST00000554310 PAX1P15863 534 aa11.44□□□□□ -0.58
SHMT2-211ENST00000554310 CDH2P19022 906 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-211ENST00000554310 TNFRSF1BP20333 461 aa11.44□□□□□ -0.58
SHMT2-211ENST00000554310 CD40P25942 277 aa11.44□□□□□ -0.58
SHMT2-211ENST00000554310 RBM34P42696 430 aaKnown RBP11.44□□□□□ -0.58
SHMT2-211ENST00000554310 CDH11P55287 796 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms