RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.93□□□□□ -0.34
SHMT2-208ENST00000553868 TMEM251Q8N6I4 163 aa12.93□□□□□ -0.34
SHMT2-208ENST00000553868 ZNF417Q8TAU3 575 aa12.93□□□□□ -0.34
SHMT2-208ENST00000553868 CNIH3Q8TBE1 160 aa12.93□□□□□ -0.34
SHMT2-208ENST00000553868 TMEM163Q8TC26 289 aa12.93□□□□□ -0.34
SHMT2-208ENST00000553868 CA5BP1Q8WTZ4 195 aa12.93□□□□□ -0.34
SHMT2-208ENST00000553868 ARL5BQ96KC2 179 aa12.93□□□□□ -0.34
SHMT2-208ENST00000553868 KLHL15Q96M94 604 aa12.93□□□□□ -0.34
SHMT2-208ENST00000553868 ERMAPQ96PL5 475 aaPredicted RBP12.93□□□□□ -0.34
SHMT2-208ENST00000553868 IL4I1Q96RQ9 567 aa12.93□□□□□ -0.34
SHMT2-208ENST00000553868 ZNF587Q96SQ5 575 aaPredicted RBP12.93□□□□□ -0.34
SHMT2-208ENST00000553868 TMEM185BQ9H7F4 350 aa12.93□□□□□ -0.34
SHMT2-208ENST00000553868 CCNB1IP1Q9NPC3 277 aa12.93□□□□□ -0.34
SHMT2-208ENST00000553868 NRIP3Q9NQ35 241 aa12.93□□□□□ -0.34
SHMT2-208ENST00000553868 CMC2Q9NRP2 79 aa12.93□□□□□ -0.34
SHMT2-208ENST00000553868 INIPQ9NRY2 104 aa12.93□□□□□ -0.34
SHMT2-208ENST00000553868 IL20RAQ9UHF4 553 aa12.93□□□□□ -0.34
SHMT2-208ENST00000553868 ST6GALNAC2Q9UJ37 374 aa12.93□□□□□ -0.34
SHMT2-208ENST00000553868 PCDHGB5Q9Y5G0 923 aa12.93□□□□□ -0.34
SHMT2-208ENST00000553868 FAM166BA8MTA8 275 aa12.92□□□□□ -0.34
SHMT2-208ENST00000553868 MCIDASD6RGH6 385 aa12.92□□□□□ -0.34
SHMT2-208ENST00000553868 SULT2B1O00204 365 aa12.92□□□□□ -0.34
SHMT2-208ENST00000553868 SLC1A7O00341 560 aa12.92□□□□□ -0.34
SHMT2-208ENST00000553868 PLPP3O14495 311 aa12.92□□□□□ -0.34
SHMT2-208ENST00000553868 SEC14L5O43304 696 aa12.92□□□□□ -0.34
SHMT2-208ENST00000553868 TLX2O43763 284 aaPredicted RBP12.92□□□□□ -0.34
SHMT2-208ENST00000553868 EIF1BO60739 113 aaKnown RBP12.92□□□□□ -0.34
SHMT2-208ENST00000553868 FAM20BO75063 409 aa12.92□□□□□ -0.34
SHMT2-208ENST00000553868 INHBBP09529 407 aa12.92□□□□□ -0.34
SHMT2-208ENST00000553868 ADORA3P0DMS8 318 aa12.92□□□□□ -0.34
SHMT2-208ENST00000553868 IMPDH2P12268 514 aa12.92□□□□□ -0.34
SHMT2-208ENST00000553868 ZNF3P17036 446 aa12.92□□□□□ -0.34
SHMT2-208ENST00000553868 GABRB1P18505 474 aa12.92□□□□□ -0.34
SHMT2-208ENST00000553868 CTXN1P60606 82 aa12.92□□□□□ -0.34
SHMT2-208ENST00000553868 ZP4Q12836 540 aa12.92□□□□□ -0.34
SHMT2-208ENST00000553868 SLC10A1Q14973 349 aa12.92□□□□□ -0.34
SHMT2-208ENST00000553868 INAQ16352 499 aa12.92□□□□□ -0.34
SHMT2-208ENST00000553868 TMPPEQ6ZT21 453 aa12.92□□□□□ -0.34
SHMT2-208ENST00000553868 ESPNLQ6ZVH7 1005 aa12.92□□□□□ -0.34
SHMT2-208ENST00000553868 BPIFB6Q8NFQ5 453 aa12.92□□□□□ -0.34
SHMT2-208ENST00000553868 MOSPD2Q8NHP6 518 aa12.92□□□□□ -0.34
SHMT2-208ENST00000553868 IPCEF1Q8WWN9 437 aaPredicted RBP12.92□□□□□ -0.34
SHMT2-208ENST00000553868 SMPDL3BQ92485 455 aa12.92□□□□□ -0.34
SHMT2-208ENST00000553868 RFKQ969G6 155 aa12.92□□□□□ -0.34
SHMT2-208ENST00000553868 C18orf12Q96KH6 178 aa12.92□□□□□ -0.34
SHMT2-208ENST00000553868 NAA11Q9BSU3 229 aaPredicted RBP12.92□□□□□ -0.34
SHMT2-208ENST00000553868 KATNB1Q9BVA0 655 aa12.92□□□□□ -0.34
SHMT2-208ENST00000553868 TSPAN10Q9H1Z9 355 aaPredicted RBP12.92□□□□□ -0.34
SHMT2-208ENST00000553868 ACKR4Q9NPB9 350 aa12.92□□□□□ -0.34
SHMT2-208ENST00000553868 PLCXD1Q9NUJ7 323 aa12.92□□□□□ -0.34
SHMT2-208ENST00000553868 H2AFY2Q9P0M6 372 aaPredicted RBP12.92□□□□□ -0.34
SHMT2-208ENST00000553868 IER3IP1Q9Y5U9 82 aa12.92□□□□□ -0.34
SHMT2-208ENST00000553868 GTF3C1Q12789 2109 aa12.91□□□□□ -0.34
SHMT2-208ENST00000553868 A0A087WXM4 84 aa12.91□□□□□ -0.34
SHMT2-208ENST00000553868 A0A1W2PRG6 482 aa12.91□□□□□ -0.34
SHMT2-208ENST00000553868 NKX2-6A6NCS4 301 aa12.91□□□□□ -0.34
SHMT2-208ENST00000553868 RNF13O43567 381 aa12.91□□□□□ -0.34
SHMT2-208ENST00000553868 PRKYO43930 277 aa12.91□□□□□ -0.34
SHMT2-208ENST00000553868 WBP4O75554 376 aaKnown RBP12.91□□□□□ -0.34
SHMT2-208ENST00000553868 CRYABP02511 175 aaKnown RBP12.91□□□□□ -0.34
SHMT2-208ENST00000553868 HEXAP06865 529 aa12.91□□□□□ -0.34
SHMT2-208ENST00000553868 CRHBPP24387 322 aa12.91□□□□□ -0.34
SHMT2-208ENST00000553868 EEF1B2P24534 225 aaKnown RBP12.91□□□□□ -0.34
SHMT2-208ENST00000553868 FMO3P31513 532 aa12.91□□□□□ -0.34
SHMT2-208ENST00000553868 MAGEA5P43359 124 aa12.91□□□□□ -0.34
SHMT2-208ENST00000553868 EFNB1P98172 346 aa12.91□□□□□ -0.34
SHMT2-208ENST00000553868 PUDPQ08623 228 aa12.91□□□□□ -0.34
SHMT2-208ENST00000553868 GID4Q8IVV7 300 aa12.91□□□□□ -0.34
SHMT2-208ENST00000553868 LRRC75AQ8NAA5 344 aa12.91□□□□□ -0.34
SHMT2-208ENST00000553868 ANKK1Q8NFD2 765 aa12.91□□□□□ -0.34
SHMT2-208ENST00000553868 TSPAN14Q8NG11 270 aa12.91□□□□□ -0.34
SHMT2-208ENST00000553868 APH1BQ8WW43 257 aa12.91□□□□□ -0.34
SHMT2-208ENST00000553868 UBE2FQ969M7 185 aa12.91□□□□□ -0.34
SHMT2-208ENST00000553868 LRR1Q96L50 414 aa12.91□□□□□ -0.34
SHMT2-208ENST00000553868 TIGARQ9NQ88 270 aa12.91□□□□□ -0.34
SHMT2-208ENST00000553868 GRHPRQ9UBQ7 328 aa12.91□□□□□ -0.34
SHMT2-208ENST00000553868 ZNF835Q9Y2P0 537 aa12.91□□□□□ -0.34
SHMT2-208ENST00000553868 RPL36Q9Y3U8 105 aaKnown RBP12.91□□□□□ -0.34
SHMT2-208ENST00000553868 MXRA5Q9NR99 2828 aa12.91□□□□□ -0.34
SHMT2-208ENST00000553868 TLN2Q9Y4G6 2542 aa12.9□□□□□ -0.34
SHMT2-208ENST00000553868 A0A1W2PNR3 127 aa12.9□□□□□ -0.34
SHMT2-208ENST00000553868 A0A1W2PNV4 684 aa12.9□□□□□ -0.34
SHMT2-208ENST00000553868 IRGMA1A4Y4 181 aa12.9□□□□□ -0.34
SHMT2-208ENST00000553868 EFCAB10A6NFE3 127 aa12.9□□□□□ -0.34
SHMT2-208ENST00000553868 NPIPB13A6NJU9 1138 aa12.9□□□□□ -0.34
SHMT2-208ENST00000553868 NPIPB4C9JG80 1138 aa12.9□□□□□ -0.34
SHMT2-208ENST00000553868 PRR23D1E9PI22 279 aaPredicted RBP12.9□□□□□ -0.34
SHMT2-208ENST00000553868 M0R129 80 aa12.9□□□□□ -0.34
SHMT2-208ENST00000553868 TFECO14948 347 aaPredicted RBP12.9□□□□□ -0.34
SHMT2-208ENST00000553868 MRPS14O60783 128 aaKnown RBP12.9□□□□□ -0.34
SHMT2-208ENST00000553868 SMNDC1O75940 238 aaKnown RBP eCLIP12.9□□□□□ -0.34
SHMT2-208ENST00000553868 LY6G6DO95868 133 aa12.9□□□□□ -0.34
SHMT2-208ENST00000553868 TXNDC12O95881 172 aa12.9□□□□□ -0.34
SHMT2-208ENST00000553868 ACTL6AO96019 429 aa12.9□□□□□ -0.34
SHMT2-208ENST00000553868 PRR23D2P0DMB1 279 aaPredicted RBP12.9□□□□□ -0.34
SHMT2-208ENST00000553868 ZNF24P17028 368 aa12.9□□□□□ -0.34
SHMT2-208ENST00000553868 AHCYP23526 432 aa12.9□□□□□ -0.34
SHMT2-208ENST00000553868 ACVR2AP27037 513 aa12.9□□□□□ -0.34
SHMT2-208ENST00000553868 SDHAP31040 664 aa12.9□□□□□ -0.34
SHMT2-208ENST00000553868 RFC3P40938 356 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms