RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 SIDT1Q9NXL6 827 aaKnown RBP11.2□□□□□ -0.62
SHMT2-207ENST00000553837 TAS2R3Q9NYW6 316 aa11.2□□□□□ -0.62
SHMT2-207ENST00000553837 A0A087WV62 115 aa11.19□□□□□ -0.62
SHMT2-207ENST00000553837 FXYD6-FXYD2A0A087WZ82 144 aa11.19□□□□□ -0.62
SHMT2-207ENST00000553837 A0A0J9YY10 115 aa11.19□□□□□ -0.62
SHMT2-207ENST00000553837 A0A1B0GTQ1 180 aa11.19□□□□□ -0.62
SHMT2-207ENST00000553837 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-207ENST00000553837 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-207ENST00000553837 ARGFXA6NJG6 315 aa11.19□□□□□ -0.62
SHMT2-207ENST00000553837 TGFBR3LH3BV60 316 aa11.19□□□□□ -0.62
SHMT2-207ENST00000553837 GABARAPH6UMI1 98 aa11.19□□□□□ -0.62
SHMT2-207ENST00000553837 HRKO00198 91 aa11.19□□□□□ -0.62
SHMT2-207ENST00000553837 BHLHE40O14503 412 aa11.19□□□□□ -0.62
SHMT2-207ENST00000553837 FLRT2O43155 660 aa11.19□□□□□ -0.62
SHMT2-207ENST00000553837 RDH16O75452 317 aa11.19□□□□□ -0.62
SHMT2-207ENST00000553837 SERPINA3P01011 423 aa11.19□□□□□ -0.62
SHMT2-207ENST00000553837 DBIP07108 87 aaKnown RBP11.19□□□□□ -0.62
SHMT2-207ENST00000553837 ST6GAL1P15907 406 aa11.19□□□□□ -0.62
SHMT2-207ENST00000553837 NRG3P56975 720 aa11.19□□□□□ -0.62
SHMT2-207ENST00000553837 STX4Q12846 297 aa11.19□□□□□ -0.62
SHMT2-207ENST00000553837 HFEQ30201 348 aa11.19□□□□□ -0.62
SHMT2-207ENST00000553837 SLC6A19Q695T7 634 aa11.19□□□□□ -0.62
SHMT2-207ENST00000553837 ARHGEF39Q8N4T4 335 aa11.19□□□□□ -0.62
SHMT2-207ENST00000553837 CDRT4Q8N9R6 151 aa11.19□□□□□ -0.62
SHMT2-207ENST00000553837 OR4N2Q8NGD1 307 aa11.19□□□□□ -0.62
SHMT2-207ENST00000553837 ZNF671Q8TAW3 534 aa11.19□□□□□ -0.62
SHMT2-207ENST00000553837 BRIX1Q8TDN6 353 aaKnown RBP11.19□□□□□ -0.62
SHMT2-207ENST00000553837 ELP5Q8TE02 316 aa11.19□□□□□ -0.62
SHMT2-207ENST00000553837 TMEM239Q8WW34 195 aa11.19□□□□□ -0.62
SHMT2-207ENST00000553837 TBX5Q99593 518 aa11.19□□□□□ -0.62
SHMT2-207ENST00000553837 FXYD6Q9H0Q3 95 aa11.19□□□□□ -0.62
SHMT2-207ENST00000553837 DUSP22Q9NRW4 184 aa11.19□□□□□ -0.62
SHMT2-207ENST00000553837 KLHL9Q9P2J3 617 aa11.19□□□□□ -0.62
SHMT2-207ENST00000553837 MRTO4Q9UKD2 239 aaKnown RBP11.19□□□□□ -0.62
SHMT2-207ENST00000553837 RPH3AQ9Y2J0 694 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-207ENST00000553837 TDRD6O60522 2096 aaKnown RBP11.19□□□□□ -0.62
SHMT2-207ENST00000553837 A0A1B0GWJ7 208 aa11.18□□□□□ -0.62
SHMT2-207ENST00000553837 UBE2QL1A1L167 161 aa11.18□□□□□ -0.62
SHMT2-207ENST00000553837 OR2W5A6NFC9 320 aa11.18□□□□□ -0.62
SHMT2-207ENST00000553837 E9PI62 339 aa11.18□□□□□ -0.62
SHMT2-207ENST00000553837 CLN5O75503 358 aa11.18□□□□□ -0.62
SHMT2-207ENST00000553837 KHDRBS3O75525 346 aaKnown RBP11.18□□□□□ -0.62
SHMT2-207ENST00000553837 KRT33AO76009 404 aa11.18□□□□□ -0.62
SHMT2-207ENST00000553837 TNFP01375 233 aa11.18□□□□□ -0.62
SHMT2-207ENST00000553837 IGKV1D-16P01601 117 aa11.18□□□□□ -0.62
SHMT2-207ENST00000553837 MECP2P51608 486 aaKnown RBP11.18□□□□□ -0.62
SHMT2-207ENST00000553837 GPR143P51810 404 aa11.18□□□□□ -0.62
SHMT2-207ENST00000553837 MAT1AQ00266 395 aaKnown RBP11.18□□□□□ -0.62
SHMT2-207ENST00000553837 MICBQ29980 383 aa11.18□□□□□ -0.62
SHMT2-207ENST00000553837 C4orf46Q504U0 113 aa11.18□□□□□ -0.62
SHMT2-207ENST00000553837 EIPR1Q53HC9 387 aa11.18□□□□□ -0.62
SHMT2-207ENST00000553837 TMEM255AQ5JRV8 349 aa11.18□□□□□ -0.62
SHMT2-207ENST00000553837 PRPF38BQ5VTL8 546 aaKnown RBP11.18□□□□□ -0.62
SHMT2-207ENST00000553837 NHLRC1Q6VVB1 395 aa11.18□□□□□ -0.62
SHMT2-207ENST00000553837 RANBP3LQ86VV4 465 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-207ENST00000553837 IZUMO1Q8IYV9 350 aa11.18□□□□□ -0.62
SHMT2-207ENST00000553837 TMEM99Q8N816 258 aa11.18□□□□□ -0.62
SHMT2-207ENST00000553837 BPIFCQ8NFQ6 507 aa11.18□□□□□ -0.62
SHMT2-207ENST00000553837 OR13C2Q8NGS9 318 aa11.18□□□□□ -0.62
SHMT2-207ENST00000553837 OR9A4Q8NGU2 314 aa11.18□□□□□ -0.62
SHMT2-207ENST00000553837 OR10K1Q8NGX5 313 aa11.18□□□□□ -0.62
SHMT2-207ENST00000553837 FCAMRQ8WWV6 532 aa11.18□□□□□ -0.62
SHMT2-207ENST00000553837 PMM1Q92871 262 aa11.18□□□□□ -0.62
SHMT2-207ENST00000553837 KISS1RQ969F8 398 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-207ENST00000553837 TCEAL7Q9BRU2 100 aa11.18□□□□□ -0.62
SHMT2-207ENST00000553837 SEMA4CQ9C0C4 833 aa11.18□□□□□ -0.62
SHMT2-207ENST00000553837 MEPEQ9NQ76 525 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-207ENST00000553837 POT1Q9NUX5 634 aa11.18□□□□□ -0.62
SHMT2-207ENST00000553837 C2orf42Q9NWW7 574 aa11.18□□□□□ -0.62
SHMT2-207ENST00000553837 FLRT3Q9NZU0 649 aa11.18□□□□□ -0.62
SHMT2-207ENST00000553837 OPN4Q9UHM6 478 aa11.18□□□□□ -0.62
SHMT2-207ENST00000553837 HS3ST3A1Q9Y663 406 aa11.18□□□□□ -0.62
SHMT2-207ENST00000553837 BRINP1O60477 761 aa11.18□□□□□ -0.62
SHMT2-207ENST00000553837 IL9P15248 144 aa11.18□□□□□ -0.62
SHMT2-207ENST00000553837 ANXA7P20073 488 aaKnown RBP11.18□□□□□ -0.62
SHMT2-207ENST00000553837 S1PR1P21453 382 aa11.18□□□□□ -0.62
SHMT2-207ENST00000553837 ZNF10P21506 573 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-207ENST00000553837 EMDP50402 254 aa11.18□□□□□ -0.62
SHMT2-207ENST00000553837 FZD2Q14332 565 aa11.18□□□□□ -0.62
SHMT2-207ENST00000553837 ZNF528Q3MIS6 628 aa11.18□□□□□ -0.62
SHMT2-207ENST00000553837 OLFML2AQ68BL7 652 aa11.18□□□□□ -0.62
SHMT2-207ENST00000553837 NIPAL3Q6P499 406 aa11.18□□□□□ -0.62
SHMT2-207ENST00000553837 LRRN1Q6UXK5 716 aa11.18□□□□□ -0.62
SHMT2-207ENST00000553837 OR10H4Q8NGA5 316 aa11.18□□□□□ -0.62
SHMT2-207ENST00000553837 OR52R1Q8NGF1 315 aa11.18□□□□□ -0.62
SHMT2-207ENST00000553837 SMAP2Q8WU79 429 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-207ENST00000553837 WDR89Q96FK6 387 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-207ENST00000553837 STACQ99469 402 aa11.18□□□□□ -0.62
SHMT2-207ENST00000553837 MFRPQ9BY79 579 aa11.18□□□□□ -0.62
SHMT2-207ENST00000553837 SPTBP11277 2137 aa11.18□□□□□ -0.62
SHMT2-207ENST00000553837 ARL6IP5O75915 188 aa11.17□□□□□ -0.62
SHMT2-207ENST00000553837 SPDEFO95238 335 aa11.17□□□□□ -0.62
SHMT2-207ENST00000553837 IGHV2-70P01814 119 aa11.17□□□□□ -0.62
SHMT2-207ENST00000553837 PRF1P14222 555 aa11.17□□□□□ -0.62
SHMT2-207ENST00000553837 CCINQ13939 588 aa11.17□□□□□ -0.62
SHMT2-207ENST00000553837 HAGHLQ6PII5 290 aaPredicted RBP11.17□□□□□ -0.62
SHMT2-207ENST00000553837 Q6ZS52 159 aa11.17□□□□□ -0.62
SHMT2-207ENST00000553837 TAF8Q7Z7C8 310 aa11.17□□□□□ -0.62
SHMT2-207ENST00000553837 CMTM4Q8IZR5 234 aa11.17□□□□□ -0.62
SHMT2-207ENST00000553837 OR52I2Q8NH67 350 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms