RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 PEX7O00628 323 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 NDUFAB1O14561 156 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 TRDMT1O14717 391 aaKnown RBP1.79□□□□□ -2.12
VRK1-202ENST00000553683 MBTPS2O43462 519 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 SULT1B1O43704 296 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 NIPSNAP2O75323 286 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 TNFSF13O75888 250 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 OR5F1O95221 314 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 MBD3O95983 291 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 S100A9P06702 114 aaKnown RBP1.79□□□□□ -2.12
VRK1-202ENST00000553683 KLK3P07288 261 aaPredicted RBP1.79□□□□□ -2.12
VRK1-202ENST00000553683 TPM1P09493 284 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 IDO1P14902 403 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 IMPDH1P20839 514 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 ATP6V1B2P21281 511 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 FMO3P31513 532 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 CCR1P32246 355 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 VDAC2P45880 294 aaPredicted RBP1.79□□□□□ -2.12
VRK1-202ENST00000553683 P2RY1P47900 373 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 BLVRAP53004 296 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 CARD18P57730 90 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 POLR2GP62487 172 aaKnown RBP eCLIP1.79□□□□□ -2.12
VRK1-202ENST00000553683 UBE2IP63279 158 aaKnown RBP1.79□□□□□ -2.12
VRK1-202ENST00000553683 MRPS15P82914 257 aaKnown RBP1.79□□□□□ -2.12
VRK1-202ENST00000553683 KLRC3Q07444 240 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 PSG5Q15238 335 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 MAPRE2Q15555 327 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 BCL2A1Q16548 175 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 DPYSL2Q16555 572 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 Q3ZCU0 254 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 SAMD4BQ5PRF9 694 aaKnown RBP1.79□□□□□ -2.12
VRK1-202ENST00000553683 C1orf185Q5T7R7 199 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 PDPK2PQ6A1A2 396 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 THOC7Q6I9Y2 204 aaKnown RBP1.79□□□□□ -2.12
VRK1-202ENST00000553683 OR52W1Q6IF63 320 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 ABHD12BQ7Z5M8 362 aaPredicted RBP1.79□□□□□ -2.12
VRK1-202ENST00000553683 CTAGE6Q86UF2 777 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 SLC22A9Q8IVM8 553 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 CDH26Q8IXH8 852 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 Q8N976 141 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 FAM133AQ8N9E0 248 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 OR1N2Q8NGR9 330 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 OR9G1Q8NH87 305 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 FAM81AQ8TBF8 368 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 ACOT11Q8WXI4 607 aaPredicted RBP1.79□□□□□ -2.12
VRK1-202ENST00000553683 RAB7BQ96AH8 199 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 ECSITQ9BQ95 431 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 LLPHQ9BRT6 129 aaKnown RBP1.79□□□□□ -2.12
VRK1-202ENST00000553683 HDHD3Q9BSH5 251 aaPredicted RBP1.79□□□□□ -2.12
VRK1-202ENST00000553683 PLA2G2FQ9BZM2 168 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 XKR8Q9H6D3 395 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 HAUS4Q9H6D7 363 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 GORASP2Q9H8Y8 452 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 SIAEQ9HAT2 523 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 POLE3Q9NRF9 147 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 CLCF1Q9UBD9 225 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 PSME2Q9UL46 239 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 TRAPPC4Q9Y296 219 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 OR10H1Q9Y4A9 318 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 SLC25A15Q9Y619 301 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 ZBED9Q6R2W3 1325 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 NACADO15069 1562 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 DOCK9Q9BZ29 2069 aa1.79□□□□□ -2.12
VRK1-202ENST00000553683 KIF21AQ7Z4S6 1674 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 LRP5O75197 1615 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 NCOA3Q9Y6Q9 1424 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 PNPLA6Q8IY17 1366 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 TNIKQ9UKE5 1360 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 LOC105371267A0A1B0GV96 52 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 HEATR9A2RTY3 570 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 LRRIQ4A6NIV6 560 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 C12orf71A8MTZ7 269 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 GOLGA6L19H0YKK7 550 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 CYTH3O43739 400 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 CACNG3O60359 315 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 SPAG6O75602 509 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 CTAG2O75638 210 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 CBR3O75828 277 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 NEBLO76041 1014 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 IFNB1P01574 187 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 IGLV3-19P01714 112 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 GLAP06280 429 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 FGF4P08620 206 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 MRPL3P09001 348 aaKnown RBP1.78□□□□□ -2.12
VRK1-202ENST00000553683 UBTFL6P0CB48 400 aaPredicted RBP1.78□□□□□ -2.12
VRK1-202ENST00000553683 ANXA8P13928 327 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 NPR2P20594 1047 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 HNF1AP20823 631 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 PRKACBP22694 351 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 CPN2P22792 545 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 OMGP23515 440 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 TAGLN2P37802 199 aaKnown RBP1.78□□□□□ -2.12
VRK1-202ENST00000553683 CBX5P45973 191 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 PSMD7P51665 324 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 CBX1P83916 185 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 CHIT1Q13231 466 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 MOBPQ13875 183 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 SPCS2Q15005 226 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 NCF4Q15080 339 aa1.78□□□□□ -2.12
VRK1-202ENST00000553683 MOGQ16653 247 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms