RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 CENPAP49450 140 aa8.69□□□□□ -1.02
CHD8-204ENST00000553622 SLC16A1P53985 500 aa8.69□□□□□ -1.02
CHD8-204ENST00000553622 RAP1BP61224 184 aa8.69□□□□□ -1.02
CHD8-204ENST00000553622 RAP1AP62834 184 aa8.69□□□□□ -1.02
CHD8-204ENST00000553622 SIRPAP78324 504 aa8.69□□□□□ -1.02
CHD8-204ENST00000553622 CD47Q08722 323 aa8.69□□□□□ -1.02
CHD8-204ENST00000553622 MED21Q13503 144 aa8.69□□□□□ -1.02
CHD8-204ENST00000553622 MESTQ5EB52 335 aa8.69□□□□□ -1.02
CHD8-204ENST00000553622 EMC4Q5J8M3 183 aa8.69□□□□□ -1.02
CHD8-204ENST00000553622 TMEM201Q5SNT2 666 aa8.69□□□□□ -1.02
CHD8-204ENST00000553622 FAM205BPQ63HN1 556 aa8.69□□□□□ -1.02
CHD8-204ENST00000553622 PLBD1Q6P4A8 553 aa8.69□□□□□ -1.02
CHD8-204ENST00000553622 AAED1Q7RTV5 226 aa8.69□□□□□ -1.02
CHD8-204ENST00000553622 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.69□□□□□ -1.02
CHD8-204ENST00000553622 FAM122BQ7Z309 247 aa8.69□□□□□ -1.02
CHD8-204ENST00000553622 HDDC2Q7Z4H3 204 aa8.69□□□□□ -1.02
CHD8-204ENST00000553622 CCDC71Q8IV32 467 aaPredicted RBP8.69□□□□□ -1.02
CHD8-204ENST00000553622 TUSC5Q8IXB3 177 aa8.69□□□□□ -1.02
CHD8-204ENST00000553622 GCNT2Q8N0V5 402 aa8.69□□□□□ -1.02
CHD8-204ENST00000553622 ARIH2OSQ8N7S6 290 aa8.69□□□□□ -1.02
CHD8-204ENST00000553622 CNEP1R1Q8N9A8 125 aa8.69□□□□□ -1.02
CHD8-204ENST00000553622 SYT14Q8NB59 555 aa8.69□□□□□ -1.02
CHD8-204ENST00000553622 SLC37A3Q8NCC5 494 aa8.69□□□□□ -1.02
CHD8-204ENST00000553622 CNIH3Q8TBE1 160 aa8.69□□□□□ -1.02
CHD8-204ENST00000553622 ZNF385AQ96PM9 386 aaKnown RBP8.69□□□□□ -1.02
CHD8-204ENST00000553622 NMNAT3Q96T66 252 aa8.69□□□□□ -1.02
CHD8-204ENST00000553622 TP63Q9H3D4 680 aaPredicted RBP8.69□□□□□ -1.02
CHD8-204ENST00000553622 C12orf49Q9H741 205 aa8.69□□□□□ -1.02
CHD8-204ENST00000553622 MED20Q9H944 212 aa8.69□□□□□ -1.02
CHD8-204ENST00000553622 CLN6Q9NWW5 311 aa8.69□□□□□ -1.02
CHD8-204ENST00000553622 DNAJC27Q9NZQ0 273 aa8.69□□□□□ -1.02
CHD8-204ENST00000553622 H2AFY2Q9P0M6 372 aaPredicted RBP8.69□□□□□ -1.02
CHD8-204ENST00000553622 TINAGQ9UJW2 476 aa8.69□□□□□ -1.02
CHD8-204ENST00000553622 RNF6Q9Y252 685 aa8.69□□□□□ -1.02
CHD8-204ENST00000553622 NOSIPQ9Y314 301 aaKnown RBP8.69□□□□□ -1.02
CHD8-204ENST00000553622 FLVCR1Q9Y5Y0 555 aa8.69□□□□□ -1.02
CHD8-204ENST00000553622 EPG5Q9HCE0 2579 aa8.69□□□□□ -1.02
CHD8-204ENST00000553622 CACNA1CQ13936 2221 aa8.69□□□□□ -1.02
CHD8-204ENST00000553622 LOC102725191A0A1B0GVB3 256 aa8.68□□□□□ -1.02
CHD8-204ENST00000553622 EIF4E1BA6NMX2 242 aaKnown RBP8.68□□□□□ -1.02
CHD8-204ENST00000553622 PRR23D1E9PI22 279 aaPredicted RBP8.68□□□□□ -1.02
CHD8-204ENST00000553622 GPR171O14626 319 aa8.68□□□□□ -1.02
CHD8-204ENST00000553622 IMPA2O14732 288 aa8.68□□□□□ -1.02
CHD8-204ENST00000553622 ARPC3O15145 178 aa8.68□□□□□ -1.02
CHD8-204ENST00000553622 MPZL2O60487 215 aa8.68□□□□□ -1.02
CHD8-204ENST00000553622 MRPL33O75394 65 aaKnown RBP8.68□□□□□ -1.02
CHD8-204ENST00000553622 TRMUO75648 421 aaKnown RBP8.68□□□□□ -1.02
CHD8-204ENST00000553622 SMNDC1O75940 238 aaKnown RBP eCLIP8.68□□□□□ -1.02
CHD8-204ENST00000553622 KRT33AO76009 404 aa8.68□□□□□ -1.02
CHD8-204ENST00000553622 IGHG1P01857 330 aa8.68□□□□□ -1.02
CHD8-204ENST00000553622 PRB1P04280 392 aa8.68□□□□□ -1.02
CHD8-204ENST00000553622 YES1P07947 543 aa8.68□□□□□ -1.02
CHD8-204ENST00000553622 PRR23D2P0DMB1 279 aaPredicted RBP8.68□□□□□ -1.02
CHD8-204ENST00000553622 APEHP13798 732 aaKnown RBP8.68□□□□□ -1.02
CHD8-204ENST00000553622 ACADSP16219 412 aa8.68□□□□□ -1.02
CHD8-204ENST00000553622 MYF6P23409 242 aa8.68□□□□□ -1.02
CHD8-204ENST00000553622 FMO3P31513 532 aa8.68□□□□□ -1.02
CHD8-204ENST00000553622 PTGER4P35408 488 aa8.68□□□□□ -1.02
CHD8-204ENST00000553622 CDKN2AP42771 156 aaKnown RBP8.68□□□□□ -1.02
CHD8-204ENST00000553622 SELENOPP49908 381 aa8.68□□□□□ -1.02
CHD8-204ENST00000553622 RPS7P62081 194 aaKnown RBP8.68□□□□□ -1.02
CHD8-204ENST00000553622 RUNX1T1Q06455 604 aa8.68□□□□□ -1.02
CHD8-204ENST00000553622 DBPQ10586 325 aaPredicted RBP8.68□□□□□ -1.02
CHD8-204ENST00000553622 ITGADQ13349 1161 aa8.68□□□□□ -1.02
CHD8-204ENST00000553622 CRMP1Q14194 572 aa8.68□□□□□ -1.02
CHD8-204ENST00000553622 MAD2L1BPQ15013 274 aaPredicted RBP8.68□□□□□ -1.02
CHD8-204ENST00000553622 POU4F3Q15319 338 aa8.68□□□□□ -1.02
CHD8-204ENST00000553622 KLHL12Q53G59 568 aa8.68□□□□□ -1.02
CHD8-204ENST00000553622 ARMC4Q5T2S8 1044 aa8.68□□□□□ -1.02
CHD8-204ENST00000553622 NSUN5P2Q63ZY6 315 aa8.68□□□□□ -1.02
CHD8-204ENST00000553622 B3GNT6Q6ZMB0 384 aa8.68□□□□□ -1.02
CHD8-204ENST00000553622 CXXC5Q7LFL8 322 aaKnown RBP8.68□□□□□ -1.02
CHD8-204ENST00000553622 BCDIN3DQ7Z5W3 292 aaKnown RBP8.68□□□□□ -1.02
CHD8-204ENST00000553622 THAP5Q7Z6K1 395 aa8.68□□□□□ -1.02
CHD8-204ENST00000553622 DOLPP1Q86YN1 238 aa8.68□□□□□ -1.02
CHD8-204ENST00000553622 CPOQ8IVL8 374 aa8.68□□□□□ -1.02
CHD8-204ENST00000553622 ZNF100Q8IYN0 542 aa8.68□□□□□ -1.02
CHD8-204ENST00000553622 ENTHD1Q8IYW4 607 aa8.68□□□□□ -1.02
CHD8-204ENST00000553622 C9orf106Q8NAJ2 232 aa8.68□□□□□ -1.02
CHD8-204ENST00000553622 ST6GALNAC3Q8NDV1 305 aa8.68□□□□□ -1.02
CHD8-204ENST00000553622 OR8J1Q8NGP2 316 aa8.68□□□□□ -1.02
CHD8-204ENST00000553622 OR9Q1Q8NGQ5 310 aa8.68□□□□□ -1.02
CHD8-204ENST00000553622 OR6N1Q8NGY5 312 aa8.68□□□□□ -1.02
CHD8-204ENST00000553622 ZNF519Q8TB69 540 aa8.68□□□□□ -1.02
CHD8-204ENST00000553622 TMEM163Q8TC26 289 aa8.68□□□□□ -1.02
CHD8-204ENST00000553622 HDAC2Q92769 488 aaKnown RBP8.68□□□□□ -1.02
CHD8-204ENST00000553622 WNT2BQ93097 391 aa8.68□□□□□ -1.02
CHD8-204ENST00000553622 ZNF566Q969W8 418 aa8.68□□□□□ -1.02
CHD8-204ENST00000553622 INTS12Q96CB8 462 aaKnown RBP8.68□□□□□ -1.02
CHD8-204ENST00000553622 LRR1Q96L50 414 aa8.68□□□□□ -1.02
CHD8-204ENST00000553622 TM9SF2Q99805 663 aa8.68□□□□□ -1.02
CHD8-204ENST00000553622 ANKRD60Q9BZ19 345 aa8.68□□□□□ -1.02
CHD8-204ENST00000553622 OR51V1Q9H2C8 321 aa8.68□□□□□ -1.02
CHD8-204ENST00000553622 HINT3Q9NQE9 182 aaKnown RBP8.68□□□□□ -1.02
CHD8-204ENST00000553622 RPRD1BQ9NQG5 326 aaKnown RBP8.68□□□□□ -1.02
CHD8-204ENST00000553622 CMC2Q9NRP2 79 aa8.68□□□□□ -1.02
CHD8-204ENST00000553622 ZNF226Q9NYT6 803 aa8.68□□□□□ -1.02
CHD8-204ENST00000553622 OSGIN2Q9Y236 505 aa8.68□□□□□ -1.02
CHD8-204ENST00000553622 LRRC42Q9Y546 428 aa8.68□□□□□ -1.02
CHD8-204ENST00000553622 IGSF10Q6WRI0 2623 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms