RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 URGCP-MRPS24S4R325 110 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 PRDM2Q13029 1718 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 NACADO15069 1562 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 ATP10AO60312 1499 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 PCNX3Q9H6A9 2034 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 PPIAL4EA0A075B759 164 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 NPIPA7E9PJI5 369 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 PDHXO00330 501 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 NBR2O15453 112 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 TAPBPO15533 448 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 SRPX2O60687 465 aaPredicted RBP3.11□□□□□ -1.91
TDP1-207ENST00000553617 TPST2O60704 377 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 SMIM24O75264 130 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 SCGNO76038 276 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 BRI3O95415 125 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 CST4P01036 141 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 PIGRP01833 764 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 TNNC2P02585 160 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 RPN2P04844 631 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 SERPINE2P07093 398 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 HBQ1P09105 142 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 SNRPCP09234 159 aaKnown RBP3.11□□□□□ -1.91
TDP1-207ENST00000553617 H2BFMP0C1H6 154 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 SLC35E2BP0CK96 405 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 SLC35E2P0CK97 266 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 RD3LP0DJH9 198 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 NPIPA8P0DM63 369 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 PPIAL4FP0DN26 164 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 HSD17B1P14061 328 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 EIF2S2P20042 333 aaKnown RBP3.11□□□□□ -1.91
TDP1-207ENST00000553617 MMP11P24347 488 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 UGT1A3P35503 534 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 UGT1A5P35504 534 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 UGT2B10P36537 528 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 MAGEA2P43356 314 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 CAPZBP47756 277 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 P2RY1P47900 373 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 MRPL19P49406 292 aaKnown RBP3.11□□□□□ -1.91
TDP1-207ENST00000553617 NOVA1P51513 510 aaKnown RBP3.11□□□□□ -1.91
TDP1-207ENST00000553617 PSMD4P55036 377 aaKnown RBP3.11□□□□□ -1.91
TDP1-207ENST00000553617 MLF1P58340 268 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 SPCS3P61009 180 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 MAGOHP61326 146 aaKnown RBP3.11□□□□□ -1.91
TDP1-207ENST00000553617 RGS1Q08116 209 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 C1orf61Q13536 156 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 C5orf64Q2M2E5 130 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 SNAI3Q3KNW1 292 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 PTPN20Q4JDL3 420 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 C14orf28Q4W4Y0 310 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 VWA2Q5GFL6 755 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 FAM120AOSQ5T036 256 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 RUSC1-AS1Q66K80 236 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 REP15Q6BDI9 236 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 OR5M10Q6IEU7 315 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 H3F3CQ6NXT2 135 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 ZNF613Q6PF04 617 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 VITQ6UXI7 678 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 ASCL4Q6XD76 172 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 MRPL21Q7Z2W9 205 aaKnown RBP3.11□□□□□ -1.91
TDP1-207ENST00000553617 ACOT1Q86TX2 421 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 ZNF546Q86UE3 836 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 CLVS1Q8IUQ0 354 aaPredicted RBP3.11□□□□□ -1.91
TDP1-207ENST00000553617 ZBED8Q8IZ13 594 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 BPIFB2Q8N4F0 458 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 TRAM1L1Q8N609 369 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 ALLCQ8N6M5 410 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 ZSCAN4Q8NAM6 433 aaPredicted RBP3.11□□□□□ -1.91
TDP1-207ENST00000553617 OR8K1Q8NGG5 319 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 OR9G4Q8NGQ1 327 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 CNIH3Q8TBE1 160 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 HCAR2Q8TDS4 363 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 BADQ92934 168 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 SDSLQ96GA7 329 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 SLC45A3Q96JT2 553 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 POM121L2Q96KW2 1035 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 OPRPNQ99935 248 aaPredicted RBP3.11□□□□□ -1.91
TDP1-207ENST00000553617 TSSK1BQ9BXA7 367 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 CALN1Q9BXU9 219 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 PARD6BQ9BYG5 372 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 BARHL1Q9BZE3 327 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 SLC22A4Q9H015 551 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 RACGAP1Q9H0H5 632 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 TUBB1Q9H4B7 451 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 CD209Q9NNX6 404 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 AMBNQ9NP70 447 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 SIGLEC8Q9NYZ4 499 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 NUDT4Q9NZJ9 180 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 UVRAGQ9P2Y5 699 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 MRM2Q9UI43 246 aaKnown RBP3.11□□□□□ -1.91
TDP1-207ENST00000553617 NPIPA1Q9UND3 350 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 ABCG2Q9UNQ0 655 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 PPIAL4AQ9Y536 164 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 MROH7-TTC4A0A0A0MT08 1334 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 LRPPRCP42704 1394 aaKnown RBP3.11□□□□□ -1.91
TDP1-207ENST00000553617 PNPLA6Q8IY17 1366 aa3.11□□□□□ -1.91
TDP1-207ENST00000553617 IGHV3OR16-10A0A075B7F0 116 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 GNG14A0A1W2PPG7 69 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 C2orf74A8MZ97 194 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 RNASEK-C17orf49H0YIS7 233 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 MKRN2OSH3BPM6 223 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms