RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 CARD17Q5XLA6 110 aa13.41□□□□□ -0.26
SHMT2-204ENST00000553324 RRM2BQ7LG56 351 aa13.41□□□□□ -0.26
SHMT2-204ENST00000553324 SLC46A3Q7Z3Q1 461 aa13.41□□□□□ -0.26
SHMT2-204ENST00000553324 CCDC197Q8NCU1 140 aa13.41□□□□□ -0.26
SHMT2-204ENST00000553324 KBTBD8Q8NFY9 601 aa13.41□□□□□ -0.26
SHMT2-204ENST00000553324 PFN4Q8NHR9 129 aa13.41□□□□□ -0.26
SHMT2-204ENST00000553324 IGFBPL1Q8WX77 278 aa13.41□□□□□ -0.26
SHMT2-204ENST00000553324 ZNF566Q969W8 418 aa13.41□□□□□ -0.26
SHMT2-204ENST00000553324 TRMT61AQ96FX7 289 aaKnown RBP13.41□□□□□ -0.26
SHMT2-204ENST00000553324 CDRT15Q96T59 188 aa13.41□□□□□ -0.26
SHMT2-204ENST00000553324 KCNS3Q9BQ31 491 aa13.41□□□□□ -0.26
SHMT2-204ENST00000553324 TMUB1Q9BVT8 246 aa13.41□□□□□ -0.26
SHMT2-204ENST00000553324 ULBP2Q9BZM5 246 aa13.41□□□□□ -0.26
SHMT2-204ENST00000553324 ANKRD19PQ9H560 264 aa13.41□□□□□ -0.26
SHMT2-204ENST00000553324 ZNF701Q9NV72 531 aaPredicted RBP13.41□□□□□ -0.26
SHMT2-204ENST00000553324 ARL8BQ9NVJ2 186 aa13.41□□□□□ -0.26
SHMT2-204ENST00000553324 MAGEL2Q9UJ55 1249 aa13.41□□□□□ -0.26
SHMT2-204ENST00000553324 PRRC2AP48634 2157 aaKnown RBP13.41□□□□□ -0.26
SHMT2-204ENST00000553324 A0A096LPE4 126 aa13.4□□□□□ -0.26
SHMT2-204ENST00000553324 A0A1W2PPZ6 126 aa13.4□□□□□ -0.26
SHMT2-204ENST00000553324 CENPBD1B2RD01 187 aa13.4□□□□□ -0.26
SHMT2-204ENST00000553324 TSPAN19P0C672 248 aa13.4□□□□□ -0.26
SHMT2-204ENST00000553324 DANCRP0C864 163 aa13.4□□□□□ -0.26
SHMT2-204ENST00000553324 FOSL1P15407 271 aa13.4□□□□□ -0.26
SHMT2-204ENST00000553324 NCK1P16333 377 aa13.4□□□□□ -0.26
SHMT2-204ENST00000553324 ITGA2P17301 1181 aa13.4□□□□□ -0.26
SHMT2-204ENST00000553324 YAP1P46937 504 aaKnown RBP13.4□□□□□ -0.26
SHMT2-204ENST00000553324 DAP3P51398 398 aaKnown RBP13.4□□□□□ -0.26
SHMT2-204ENST00000553324 FOXD4Q12950 439 aaPredicted RBP13.4□□□□□ -0.26
SHMT2-204ENST00000553324 FXNQ16595 210 aa13.4□□□□□ -0.26
SHMT2-204ENST00000553324 AGAP6Q5VW22 663 aa13.4□□□□□ -0.26
SHMT2-204ENST00000553324 ZNF627Q7L945 461 aa13.4□□□□□ -0.26
SHMT2-204ENST00000553324 IL17RDQ8NFM7 739 aa13.4□□□□□ -0.26
SHMT2-204ENST00000553324 ACOT11Q8WXI4 607 aaPredicted RBP13.4□□□□□ -0.26
SHMT2-204ENST00000553324 GTPBP3Q969Y2 492 aaKnown RBP13.4□□□□□ -0.26
SHMT2-204ENST00000553324 BPIFA2Q96DR5 249 aa13.4□□□□□ -0.26
SHMT2-204ENST00000553324 NSL1Q96IY1 281 aa13.4□□□□□ -0.26
SHMT2-204ENST00000553324 SLC38A2Q96QD8 506 aa13.4□□□□□ -0.26
SHMT2-204ENST00000553324 DHRS9Q9BPW9 319 aa13.4□□□□□ -0.26
SHMT2-204ENST00000553324 DENND2DQ9H6A0 471 aaPredicted RBP13.4□□□□□ -0.26
SHMT2-204ENST00000553324 C20orf141Q9NUB4 165 aa13.4□□□□□ -0.26
SHMT2-204ENST00000553324 GLTPQ9NZD2 209 aa13.4□□□□□ -0.26
SHMT2-204ENST00000553324 CRNNQ9UBG3 495 aaPredicted RBP13.4□□□□□ -0.26
SHMT2-204ENST00000553324 CD300AQ9UGN4 299 aa13.4□□□□□ -0.26
SHMT2-204ENST00000553324 SNX13Q9Y5W8 968 aa13.4□□□□□ -0.26
SHMT2-204ENST00000553324 ENPP4Q9Y6X5 453 aa13.4□□□□□ -0.26
SHMT2-204ENST00000553324 NPIPB13A6NJU9 1138 aa13.39□□□□□ -0.27
SHMT2-204ENST00000553324 NPIPB4C9JG80 1138 aa13.39□□□□□ -0.27
SHMT2-204ENST00000553324 MCIDASD6RGH6 385 aa13.39□□□□□ -0.27
SHMT2-204ENST00000553324 OVOL3O00110 214 aa13.39□□□□□ -0.27
SHMT2-204ENST00000553324 FFAR1O14842 300 aa13.39□□□□□ -0.27
SHMT2-204ENST00000553324 MGRN1O60291 552 aa13.39□□□□□ -0.27
SHMT2-204ENST00000553324 IGHG1P01857 330 aa13.39□□□□□ -0.27
SHMT2-204ENST00000553324 CRYAAP02489 173 aa13.39□□□□□ -0.27
SHMT2-204ENST00000553324 BMP4P12644 408 aa13.39□□□□□ -0.27
SHMT2-204ENST00000553324 CBR1P16152 277 aa13.39□□□□□ -0.27
SHMT2-204ENST00000553324 RHCEP18577 417 aa13.39□□□□□ -0.27
SHMT2-204ENST00000553324 ARR3P36575 388 aa13.39□□□□□ -0.27
SHMT2-204ENST00000553324 PTH2RP49190 550 aa13.39□□□□□ -0.27
SHMT2-204ENST00000553324 SLC25A3Q00325 362 aa13.39□□□□□ -0.27
SHMT2-204ENST00000553324 PRKCDQ05655 676 aa13.39□□□□□ -0.27
SHMT2-204ENST00000553324 RPL18Q07020 188 aaKnown RBP13.39□□□□□ -0.27
SHMT2-204ENST00000553324 TAF11Q15544 211 aa13.39□□□□□ -0.27
SHMT2-204ENST00000553324 PGGHGQ32M88 737 aa13.39□□□□□ -0.27
SHMT2-204ENST00000553324 ZNF544Q6NX49 715 aa13.39□□□□□ -0.27
SHMT2-204ENST00000553324 ZNF730Q6ZMV8 503 aa13.39□□□□□ -0.27
SHMT2-204ENST00000553324 PIWIL3Q7Z3Z3 882 aaKnown RBP13.39□□□□□ -0.27
SHMT2-204ENST00000553324 ARHGAP24Q8N264 748 aa13.39□□□□□ -0.27
SHMT2-204ENST00000553324 FITM2Q8N6M3 262 aa13.39□□□□□ -0.27
SHMT2-204ENST00000553324 RNF148Q8N7C7 305 aa13.39□□□□□ -0.27
SHMT2-204ENST00000553324 NANOS1Q8WY41 292 aaKnown RBP13.39□□□□□ -0.27
SHMT2-204ENST00000553324 NEUROG1Q92886 237 aa13.39□□□□□ -0.27
SHMT2-204ENST00000553324 TMEM54Q969K7 222 aa13.39□□□□□ -0.27
SHMT2-204ENST00000553324 ZNF837Q96EG3 531 aaPredicted RBP13.39□□□□□ -0.27
SHMT2-204ENST00000553324 PERPQ96FX8 193 aa13.39□□□□□ -0.27
SHMT2-204ENST00000553324 PYURFQ96I23 114 aa13.39□□□□□ -0.27
SHMT2-204ENST00000553324 KATNB1Q9BVA0 655 aa13.39□□□□□ -0.27
SHMT2-204ENST00000553324 NMNAT1Q9HAN9 279 aaPredicted RBP13.39□□□□□ -0.27
SHMT2-204ENST00000553324 INIPQ9NRY2 104 aa13.39□□□□□ -0.27
SHMT2-204ENST00000553324 ADAM21Q9UKJ8 722 aa13.39□□□□□ -0.27
SHMT2-204ENST00000553324 PRR14LQ5THK1 2151 aa13.39□□□□□ -0.27
SHMT2-204ENST00000553324 ROS1P08922 2347 aa13.39□□□□□ -0.27
SHMT2-204ENST00000553324 A0A1W2PRQ8 180 aa13.38□□□□□ -0.27
SHMT2-204ENST00000553324 VSTM5A8MXK1 200 aa13.38□□□□□ -0.27
SHMT2-204ENST00000553324 J3KTA2 159 aa13.38□□□□□ -0.27
SHMT2-204ENST00000553324 IGKV3-15P01624 115 aa13.38□□□□□ -0.27
SHMT2-204ENST00000553324 SOD3P08294 240 aa13.38□□□□□ -0.27
SHMT2-204ENST00000553324 SAGP10523 405 aaPredicted RBP13.38□□□□□ -0.27
SHMT2-204ENST00000553324 NR2C1P13056 603 aa13.38□□□□□ -0.27
SHMT2-204ENST00000553324 IFI30P13284 250 aa13.38□□□□□ -0.27
SHMT2-204ENST00000553324 TCN1P20061 433 aaPredicted RBP13.38□□□□□ -0.27
SHMT2-204ENST00000553324 TTKP33981 857 aa13.38□□□□□ -0.27
SHMT2-204ENST00000553324 AQP2P41181 271 aa13.38□□□□□ -0.27
SHMT2-204ENST00000553324 SLC9A3P48764 834 aa13.38□□□□□ -0.27
SHMT2-204ENST00000553324 SMIM11AP58511 58 aa13.38□□□□□ -0.27
SHMT2-204ENST00000553324 DGCR6Q14129 220 aa13.38□□□□□ -0.27
SHMT2-204ENST00000553324 LAPTM4AQ15012 233 aa13.38□□□□□ -0.27
SHMT2-204ENST00000553324 ETFDHQ16134 617 aa13.38□□□□□ -0.27
SHMT2-204ENST00000553324 Q5PR19 223 aa13.38□□□□□ -0.27
SHMT2-204ENST00000553324 PHYHD1Q5SRE7 291 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms